RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W YLL053CP0CD98 152 aa1.24□□□□□ -2.21
SLX4YLR135W DCC1P25559 380 aa1.24□□□□□ -2.21
SLX4YLR135W RPL16AP26784 199 aaKnown RBP1.24□□□□□ -2.21
SLX4YLR135W PRR1P28708 518 aa1.24□□□□□ -2.21
SLX4YLR135W MNN9P39107 395 aaKnown RBP1.24□□□□□ -2.21
SLX4YLR135W PCL7P40186 285 aa1.24□□□□□ -2.21
SLX4YLR135W BTT1P40314 149 aaPredicted RBP1.24□□□□□ -2.21
SLX4YLR135W HAC1P41546 238 aa1.24□□□□□ -2.21
SLX4YLR135W LOH1P47055 219 aa1.24□□□□□ -2.21
SLX4YLR135W GPI8P49018 411 aa1.24□□□□□ -2.21
SLX4YLR135W NAT4Q04751 285 aa1.24□□□□□ -2.21
SLX4YLR135W YLR297WQ05899 129 aa1.24□□□□□ -2.21
SLX4YLR135W YLH47Q06493 454 aa1.24□□□□□ -2.21
SLX4YLR135W APC5Q08683 685 aa1.24□□□□□ -2.21
SLX4YLR135W PLP2Q12017 286 aa1.24□□□□□ -2.21
SLX4YLR135W GLE1Q12315 538 aa1.24□□□□□ -2.21
SLX4YLR135W SPO24Q3E752 67 aa1.24□□□□□ -2.21
SLX4YLR135W DET1Q99288 334 aaKnown RBP1.24□□□□□ -2.21
SLX4YLR135W VPS63O13549 108 aa1.23□□□□□ -2.21
SLX4YLR135W RAD1P06777 1100 aa1.23□□□□□ -2.21
SLX4YLR135W NAM2P11325 894 aa1.23□□□□□ -2.21
SLX4YLR135W CSE2P33308 149 aa1.23□□□□□ -2.21
SLX4YLR135W MRPL40P36534 297 aa1.23□□□□□ -2.21
SLX4YLR135W YPT35P38815 214 aaKnown RBP1.23□□□□□ -2.21
SLX4YLR135W RBG1P39729 369 aa1.23□□□□□ -2.21
SLX4YLR135W YER186CP40101 306 aa1.23□□□□□ -2.21
SLX4YLR135W AIM20P40451 204 aa1.23□□□□□ -2.21
SLX4YLR135W INA22P40576 216 aa1.23□□□□□ -2.21
SLX4YLR135W ATG18P43601 500 aa1.23□□□□□ -2.21
SLX4YLR135W CIN2P46670 268 aa1.23□□□□□ -2.21
SLX4YLR135W CTK3P46963 296 aaPredicted RBP1.23□□□□□ -2.21
SLX4YLR135W BNS1P50084 137 aa1.23□□□□□ -2.21
SLX4YLR135W SHY1P53266 389 aa1.23□□□□□ -2.21
SLX4YLR135W SKI8Q02793 397 aaPredicted RBP1.23□□□□□ -2.21
SLX4YLR135W RVB1Q03940 463 aaKnown RBP1.23□□□□□ -2.21
SLX4YLR135W YMR027WQ04371 470 aa1.23□□□□□ -2.21
SLX4YLR135W CSM3Q04659 317 aa1.23□□□□□ -2.21
SLX4YLR135W CUR1Q06469 252 aa1.23□□□□□ -2.21
SLX4YLR135W MFG1Q07684 458 aa1.23□□□□□ -2.21
SLX4YLR135W SFM1Q12314 213 aa1.23□□□□□ -2.21
SLX4YLR135W YDL199CQ12407 687 aa1.23□□□□□ -2.21
SLX4YLR135W IZH2Q12442 317 aa1.23□□□□□ -2.21
SLX4YLR135W HEM4P06174 275 aa1.23□□□□□ -2.21
SLX4YLR135W RPS18AP0CX55 146 aaKnown RBP1.23□□□□□ -2.21
SLX4YLR135W RPS18BP0CX56 146 aaPredicted RBP1.23□□□□□ -2.21
SLX4YLR135W DAL5P15365 543 aa1.23□□□□□ -2.21
SLX4YLR135W UTR1P21373 530 aa1.23□□□□□ -2.21
SLX4YLR135W CIN8P27895 1000 aa1.23□□□□□ -2.21
SLX4YLR135W MKK1P32490 508 aa1.23□□□□□ -2.21
SLX4YLR135W SPR1P32603 445 aa1.23□□□□□ -2.21
SLX4YLR135W RTC2P38279 296 aa1.23□□□□□ -2.21
SLX4YLR135W SWC5P38326 303 aa1.23□□□□□ -2.21
SLX4YLR135W ATG7P38862 630 aa1.23□□□□□ -2.21
SLX4YLR135W AIM10P39965 576 aaKnown RBP1.23□□□□□ -2.21
SLX4YLR135W EGT2P42835 1041 aa1.23□□□□□ -2.21
SLX4YLR135W YFR057WP43625 151 aa1.23□□□□□ -2.21
SLX4YLR135W RIB4P50861 169 aaPredicted RBP1.23□□□□□ -2.21
SLX4YLR135W CWC22P53333 577 aaKnown RBP1.23□□□□□ -2.21
SLX4YLR135W REX2P54964 269 aaKnown RBP1.23□□□□□ -2.21
SLX4YLR135W CAB5Q03941 241 aa1.23□□□□□ -2.21
SLX4YLR135W UBX2Q04228 584 aa1.23□□□□□ -2.21
SLX4YLR135W RRG8Q06109 277 aa1.23□□□□□ -2.21
SLX4YLR135W VAC14Q06708 880 aa1.23□□□□□ -2.21
SLX4YLR135W DNL4Q08387 944 aaPredicted RBP1.23□□□□□ -2.21
SLX4YLR135W RRG7Q08774 242 aaPredicted RBP1.23□□□□□ -2.21
SLX4YLR135W SLM3Q12093 417 aa1.23□□□□□ -2.21
SLX4YLR135W YDL109CQ12103 647 aa1.23□□□□□ -2.21
SLX4YLR135W YIL002W-AQ3E7Z5 69 aa1.23□□□□□ -2.21
SLX4YLR135W UBA3Q99344 299 aa1.23□□□□□ -2.21
SLX4YLR135W ADH2P00331 348 aaKnown RBP1.22□□□□□ -2.21
SLX4YLR135W AAT2P23542 418 aaKnown RBP1.22□□□□□ -2.21
SLX4YLR135W MIR1P23641 311 aaKnown RBP1.22□□□□□ -2.21
SLX4YLR135W VMA5P31412 392 aaKnown RBP1.22□□□□□ -2.21
SLX4YLR135W ACB1P31787 87 aa1.22□□□□□ -2.21
SLX4YLR135W BUD2P33314 1104 aa1.22□□□□□ -2.21
SLX4YLR135W MYO3P36006 1272 aa1.22□□□□□ -2.21
SLX4YLR135W UTP18P40362 594 aaPredicted RBP1.22□□□□□ -2.21
SLX4YLR135W UTP25P40498 721 aaKnown RBP1.22□□□□□ -2.21
SLX4YLR135W GAB1P41733 394 aa1.22□□□□□ -2.21
SLX4YLR135W YCH1P42937 148 aa1.22□□□□□ -2.21
SLX4YLR135W YFR018CP43599 363 aa1.22□□□□□ -2.21
SLX4YLR135W YJR030CP47101 745 aa1.22□□□□□ -2.21
SLX4YLR135W NAS6P50086 228 aa1.22□□□□□ -2.21
SLX4YLR135W TAF6P53040 516 aa1.22□□□□□ -2.21
SLX4YLR135W SDT1P53078 280 aa1.22□□□□□ -2.21
SLX4YLR135W VOA1P53262 265 aa1.22□□□□□ -2.21
SLX4YLR135W DBP6P53734 629 aaKnown RBP1.22□□□□□ -2.21
SLX4YLR135W VAC7P53950 1165 aa1.22□□□□□ -2.21
SLX4YLR135W EGD1Q02642 157 aaKnown RBP1.22□□□□□ -2.21
SLX4YLR135W SPO19Q03029 223 aa1.22□□□□□ -2.21
SLX4YLR135W ABZ2Q03266 374 aa1.22□□□□□ -2.21
SLX4YLR135W YHC1Q05900 231 aaKnown RBP1.22□□□□□ -2.21
SLX4YLR135W RSA1Q08932 381 aa1.22□□□□□ -2.21
SLX4YLR135W HRT3Q12347 344 aa1.22□□□□□ -2.21
SLX4YLR135W HMS1Q12398 434 aa1.22□□□□□ -2.21
SLX4YLR135W INO80P53115 1489 aa1.22□□□□□ -2.21
SLX4YLR135W STE7P06784 515 aa1.21□□□□□ -2.21
SLX4YLR135W RPC40P07703 335 aaKnown RBP1.21□□□□□ -2.21
SLX4YLR135W RPL23AP0CX41 137 aaKnown RBP1.21□□□□□ -2.21
SLX4YLR135W RPL23BP0CX42 137 aaKnown RBP1.21□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms