RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C HHT1P61830 136 aa2.21□□□□□ -2.06
CSF1YLR087C ELP4Q02884 456 aaKnown RBP2.21□□□□□ -2.06
CSF1YLR087C UME1Q03010 460 aa2.21□□□□□ -2.06
CSF1YLR087C YMR160WQ03823 816 aa2.21□□□□□ -2.06
CSF1YLR087C LIP2Q06005 328 aa2.21□□□□□ -2.06
CSF1YLR087C POM34Q12445 299 aa2.21□□□□□ -2.06
CSF1YLR087C TSC13Q99190 310 aa2.21□□□□□ -2.06
CSF1YLR087C HRR25P29295 494 aaKnown RBP2.21□□□□□ -2.06
CSF1YLR087C SKT5P34226 696 aa2.21□□□□□ -2.06
CSF1YLR087C IZH1Q03419 316 aa2.21□□□□□ -2.06
CSF1YLR087C YLR177WQ06251 628 aa2.21□□□□□ -2.06
CSF1YLR087C YOL075CQ08234 1294 aa2.21□□□□□ -2.06
CSF1YLR087C UAF30Q08747 228 aa2.21□□□□□ -2.06
CSF1YLR087C SAL1D6W196 494 aa2.2□□□□□ -2.06
CSF1YLR087C PHO11P35842 467 aa2.2□□□□□ -2.06
CSF1YLR087C SHE2P36068 246 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
CSF1YLR087C PCS60P38137 543 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
CSF1YLR087C PHO12P38693 467 aa2.2□□□□□ -2.06
CSF1YLR087C IPI1P38803 334 aaPredicted RBP2.2□□□□□ -2.06
CSF1YLR087C BOR1P53838 576 aa2.2□□□□□ -2.06
CSF1YLR087C YNL034WP53963 612 aa2.2□□□□□ -2.06
CSF1YLR087C YNL018CP53976 612 aa2.2□□□□□ -2.06
CSF1YLR087C SNU56Q03782 492 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C GMC1Q04399 608 aa2.2□□□□□ -2.06
CSF1YLR087C UPS1Q05776 175 aa2.2□□□□□ -2.06
CSF1YLR087C ATG39Q06159 398 aa2.2□□□□□ -2.06
CSF1YLR087C RPN5Q12250 445 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C ERP3Q12403 225 aa2.2□□□□□ -2.06
CSF1YLR087C MED11Q99278 115 aa2.2□□□□□ -2.06
CSF1YLR087C DIF1O13577 133 aa2.2□□□□□ -2.06
CSF1YLR087C ADE4P04046 510 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C COR1P07256 457 aa2.2□□□□□ -2.06
CSF1YLR087C SCH9P11792 824 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C RPS7AP26786 190 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C FMO1P38866 432 aa2.2□□□□□ -2.06
CSF1YLR087C LSM4P40070 187 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C YFL040WP43562 540 aa2.2□□□□□ -2.06
CSF1YLR087C YJR149WP47177 404 aa2.2□□□□□ -2.06
CSF1YLR087C YGL242CP53066 181 aa2.2□□□□□ -2.06
CSF1YLR087C YDR249CQ03787 373 aa2.2□□□□□ -2.06
CSF1YLR087C SNA4Q07549 140 aa2.2□□□□□ -2.06
CSF1YLR087C YLR001CQ07895 862 aa2.2□□□□□ -2.06
CSF1YLR087C TGL5Q12043 749 aa2.2□□□□□ -2.06
CSF1YLR087C LCB4Q12246 624 aa2.2□□□□□ -2.06
CSF1YLR087C BOL1Q3E793 110 aa2.2□□□□□ -2.06
CSF1YLR087C TY1B-BRQ12193 1756 aa2.2□□□□□ -2.06
CSF1YLR087C TY1B-GR3Q12316 1755 aa2.2□□□□□ -2.06
CSF1YLR087C TY1B-ORQ92393 1755 aa2.2□□□□□ -2.06
CSF1YLR087C DST1P07273 309 aa2.2□□□□□ -2.06
CSF1YLR087C FEN2P25621 512 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C PDC6P26263 563 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C SGE1P33335 543 aa2.2□□□□□ -2.06
CSF1YLR087C EAF5P39995 279 aa2.2□□□□□ -2.06
CSF1YLR087C PRM5P40476 318 aa2.2□□□□□ -2.06
CSF1YLR087C IRC24P40580 263 aa2.2□□□□□ -2.06
CSF1YLR087C SMK1P41808 388 aa2.2□□□□□ -2.06
CSF1YLR087C IRC8P47046 822 aa2.2□□□□□ -2.06
CSF1YLR087C YJR079WP47126 109 aa2.2□□□□□ -2.06
CSF1YLR087C ALD2P47771 506 aa2.2□□□□□ -2.06
CSF1YLR087C FMN1Q03778 218 aa2.2□□□□□ -2.06
CSF1YLR087C LRS4Q04087 347 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C BER1Q06688 274 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C PEX15Q08215 383 aa2.2□□□□□ -2.06
CSF1YLR087C INP53Q12271 1107 aa2.2□□□□□ -2.06
CSF1YLR087C HSH49Q99181 213 aaPredicted RBP2.2□□□□□ -2.06
CSF1YLR087C Q0144Q9ZZW2 109 aa2.2□□□□□ -2.06
CSF1YLR087C FLO9P39712 1322 aa2.2□□□□□ -2.06
CSF1YLR087C GPM1P00950 247 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C VAR1P02381 398 aa2.2□□□□□ -2.06
CSF1YLR087C PPH22P23595 377 aa2.2□□□□□ -2.06
CSF1YLR087C PTC6P25646 442 aa2.2□□□□□ -2.06
CSF1YLR087C SCM4P32564 187 aa2.2□□□□□ -2.06
CSF1YLR087C PPQ1P32945 549 aa2.2□□□□□ -2.06
CSF1YLR087C BZZ1P38822 633 aa2.2□□□□□ -2.06
CSF1YLR087C SAE2P46946 345 aa2.2□□□□□ -2.06
CSF1YLR087C FMP48P53233 369 aa2.2□□□□□ -2.06
CSF1YLR087C ROY1Q04847 553 aa2.2□□□□□ -2.06
CSF1YLR087C MMT2Q08970 484 aa2.2□□□□□ -2.06
CSF1YLR087C YAH1Q12184 172 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C FLO1P32768 1537 aa2.2□□□□□ -2.06
CSF1YLR087C THP2O13539 261 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C STE50P25344 346 aa2.2□□□□□ -2.06
CSF1YLR087C ADE1P27616 306 aa2.2□□□□□ -2.06
CSF1YLR087C HMX1P32339 317 aa2.2□□□□□ -2.06
CSF1YLR087C MAD3P47074 515 aa2.2□□□□□ -2.06
CSF1YLR087C SIW14P53965 281 aa2.2□□□□□ -2.06
CSF1YLR087C SLD5Q03406 294 aa2.2□□□□□ -2.06
CSF1YLR087C VAM3Q12241 283 aa2.2□□□□□ -2.06
CSF1YLR087C PAR32Q12515 295 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C YLR099W-AQ3E798 87 aa2.2□□□□□ -2.06
CSF1YLR087C SRN2Q99176 213 aa2.2□□□□□ -2.06
CSF1YLR087C YCR099CP25657 155 aa2.2□□□□□ -2.06
CSF1YLR087C CYS4P32582 507 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C ECM21P38167 1117 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C LSM12P38828 187 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C HRB1P38922 454 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
CSF1YLR087C CCT2P39076 527 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C SCS2P40075 244 aaKnown RBP2.2□□□□□ -2.06
CSF1YLR087C GAT2P40209 560 aa2.2□□□□□ -2.06
CSF1YLR087C YJR056CP47115 236 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms