RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C TPM1P17536 199 aaKnown RBP2.55□□□□□ -2
YPT52YKR014C TOA2P32774 122 aa2.55□□□□□ -2
YPT52YKR014C FMT1P32785 401 aa2.55□□□□□ -2
YPT52YKR014C DAD2P36162 133 aa2.55□□□□□ -2
YPT52YKR014C YBL028CP38202 106 aa2.55□□□□□ -2
YPT52YKR014C ECM34P38728 170 aa2.55□□□□□ -2
YPT52YKR014C MLH1P38920 769 aa2.55□□□□□ -2
YPT52YKR014C EPL1P43572 832 aa2.55□□□□□ -2
YPT52YKR014C VEL1P53058 206 aa2.55□□□□□ -2
YPT52YKR014C MEH1Q02205 184 aa2.55□□□□□ -2
YPT52YKR014C YDR286CQ05530 114 aa2.55□□□□□ -2
YPT52YKR014C IPK1Q06667 281 aa2.55□□□□□ -2
YPT52YKR014C TFB5Q3E7C1 72 aaPredicted RBP2.55□□□□□ -2
YPT52YKR014C TPI1P00942 248 aaKnown RBP2.54□□□□□ -2
YPT52YKR014C MAS2P11914 482 aa2.54□□□□□ -2
YPT52YKR014C PUT4P15380 627 aa2.54□□□□□ -2
YPT52YKR014C PHO84P25297 587 aaKnown RBP2.54□□□□□ -2
YPT52YKR014C LAS1P36146 502 aaPredicted RBP2.54□□□□□ -2
YPT52YKR014C DTR1P38125 572 aa2.54□□□□□ -2
YPT52YKR014C YBR241CP38142 488 aa2.54□□□□□ -2
YPT52YKR014C YSW1P38280 609 aa2.54□□□□□ -2
YPT52YKR014C CHL4P38907 458 aa2.54□□□□□ -2
YPT52YKR014C CIN2P46670 268 aa2.54□□□□□ -2
YPT52YKR014C RNH201P53942 307 aa2.54□□□□□ -2
YPT52YKR014C PGC1Q08959 321 aa2.54□□□□□ -2
YPT52YKR014C SRO7Q12038 1033 aa2.54□□□□□ -2
YPT52YKR014C HIF1Q12373 385 aa2.54□□□□□ -2
YPT52YKR014C EPT1P22140 391 aa2.53□□□□□ -2
YPT52YKR014C POT1P27796 417 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
YPT52YKR014C SMI1P32566 505 aa2.53□□□□□ -2
YPT52YKR014C ADH5P38113 351 aaKnown RBP2.53□□□□□ -2
YPT52YKR014C KEG1P43614 200 aa2.53□□□□□ -2
YPT52YKR014C VAC7P53950 1165 aa2.53□□□□□ -2
YPT52YKR014C GAS2Q06135 555 aa2.53□□□□□ -2
YPT52YKR014C YFH1Q07540 174 aa2.53□□□□□ -2
YPT52YKR014C YDL109CQ12103 647 aa2.53□□□□□ -2
YPT52YKR014C MCT1Q12283 360 aa2.53□□□□□ -2
YPT52YKR014C PRM7Q12459 698 aa2.53□□□□□ -2
YPT52YKR014C ZIP1P31111 875 aa2.52□□□□□ -2.01
YPT52YKR014C SIF2P38262 535 aa2.52□□□□□ -2.01
YPT52YKR014C SPP381P38282 291 aaPredicted RBP2.52□□□□□ -2.01
YPT52YKR014C ABM1P47146 123 aa2.52□□□□□ -2.01
YPT52YKR014C PIN3Q06449 215 aa2.52□□□□□ -2.01
YPT52YKR014C SHS1Q07657 551 aa2.52□□□□□ -2.01
YPT52YKR014C UNG1P12887 359 aa2.51□□□□□ -2.01
YPT52YKR014C DAP2P18962 818 aa2.51□□□□□ -2.01
YPT52YKR014C CHA1P25379 360 aaKnown RBP2.51□□□□□ -2.01
YPT52YKR014C KRR1P25586 316 aaPredicted RBP2.51□□□□□ -2.01
YPT52YKR014C TOA1P32773 286 aa2.51□□□□□ -2.01
YPT52YKR014C PDC2P32896 925 aa2.51□□□□□ -2.01
YPT52YKR014C UIP5P36137 443 aa2.51□□□□□ -2.01
YPT52YKR014C SEH1P53011 349 aaKnown RBP2.51□□□□□ -2.01
YPT52YKR014C YGR067CP53243 804 aa2.51□□□□□ -2.01
YPT52YKR014C HST1P53685 503 aa2.51□□□□□ -2.01
YPT52YKR014C DBP9Q06218 594 aaKnown RBP2.51□□□□□ -2.01
YPT52YKR014C NOP6Q07623 225 aaKnown RBP2.51□□□□□ -2.01
YPT52YKR014C RPL23AP0CX41 137 aaKnown RBP2.5□□□□□ -2.01
YPT52YKR014C RPL23BP0CX42 137 aaKnown RBP2.5□□□□□ -2.01
YPT52YKR014C VMA2P16140 517 aaKnown RBP2.5□□□□□ -2.01
YPT52YKR014C TRX1P22217 103 aaKnown RBP2.5□□□□□ -2.01
YPT52YKR014C SSE1P32589 693 aaKnown RBP2.5□□□□□ -2.01
YPT52YKR014C YEL043WP32618 956 aa2.5□□□□□ -2.01
YPT52YKR014C YKR015CP36111 568 aa2.5□□□□□ -2.01
YPT52YKR014C SHE3P38272 425 aaKnown RBP2.5□□□□□ -2.01
YPT52YKR014C YHR182WP38870 785 aa2.5□□□□□ -2.01
YPT52YKR014C POP2P39008 433 aa2.5□□□□□ -2.01
YPT52YKR014C PFS2P42841 465 aaKnown RBP2.5□□□□□ -2.01
YPT52YKR014C COQ5P49017 307 aa2.5□□□□□ -2.01
YPT52YKR014C SLT2Q00772 484 aa2.5□□□□□ -2.01
YPT52YKR014C ATP16Q12165 160 aa2.5□□□□□ -2.01
YPT52YKR014C YPS3Q12303 508 aa2.5□□□□□ -2.01
YPT52YKR014C YOR338WQ99326 363 aa2.5□□□□□ -2.01
YPT52YKR014C SCH9P11792 824 aaKnown RBP2.49□□□□□ -2.01
YPT52YKR014C UBA1P22515 1024 aaKnown RBP2.49□□□□□ -2.01
YPT52YKR014C FAA1P30624 700 aaKnown RBP2.49□□□□□ -2.01
YPT52YKR014C EFB1P32471 206 aaKnown RBP2.49□□□□□ -2.01
YPT52YKR014C SPS19P32573 292 aaKnown RBP2.49□□□□□ -2.01
YPT52YKR014C YHR177WP38867 453 aa2.49□□□□□ -2.01
YPT52YKR014C LYS12P40495 371 aaKnown RBP2.49□□□□□ -2.01
YPT52YKR014C YIR035CP40579 254 aa2.49□□□□□ -2.01
YPT52YKR014C STB1P42845 420 aa2.49□□□□□ -2.01
YPT52YKR014C BIO3P50277 480 aa2.49□□□□□ -2.01
YPT52YKR014C CUE3P53137 624 aaKnown RBP2.49□□□□□ -2.01
YPT52YKR014C PDR16P53860 351 aaKnown RBP2.49□□□□□ -2.01
YPT52YKR014C AQR1P53943 586 aa2.49□□□□□ -2.01
YPT52YKR014C GAT3Q07928 141 aa2.49□□□□□ -2.01
YPT52YKR014C TIR4Q12218 487 aaPredicted RBP2.49□□□□□ -2.01
YPT52YKR014C NBL1Q3E7Y6 73 aa2.49□□□□□ -2.01
YPT52YKR014C TPS2P31688 896 aaKnown RBP2.48□□□□□ -2.01
YPT52YKR014C YIL089WP40500 205 aa2.48□□□□□ -2.01
YPT52YKR014C CTK3P46963 296 aaPredicted RBP2.48□□□□□ -2.01
YPT52YKR014C RPA34P47006 233 aaPredicted RBP2.48□□□□□ -2.01
YPT52YKR014C AIM23P47015 356 aa2.48□□□□□ -2.01
YPT52YKR014C MPS2P53159 387 aa2.48□□□□□ -2.01
YPT52YKR014C YGR015CP53208 328 aa2.48□□□□□ -2.01
YPT52YKR014C YNR068CP53754 272 aa2.48□□□□□ -2.01
YPT52YKR014C YNL143CP53908 130 aa2.48□□□□□ -2.01
YPT52YKR014C MRX11Q03079 207 aa2.48□□□□□ -2.01
YPT52YKR014C YLH47Q06493 454 aa2.48□□□□□ -2.01
YPT52YKR014C PML1Q07930 204 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms