RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W IDP2P41939 412 aa5.01□□□□□ -1.61
PRP40YKL012W YFL067WP43537 175 aa5.01□□□□□ -1.61
PRP40YKL012W LSC1P53598 329 aaKnown RBP5.01□□□□□ -1.61
PRP40YKL012W HNT3Q08702 217 aa5.01□□□□□ -1.61
PRP40YKL012W MLP2P40457 1679 aa5□□□□□ -1.61
PRP40YKL012W SMC4Q12267 1418 aa5□□□□□ -1.61
PRP40YKL012W GDH1P07262 454 aaKnown RBP5□□□□□ -1.61
PRP40YKL012W SBE22P38814 852 aa5□□□□□ -1.61
PRP40YKL012W ATG7P38862 630 aa5□□□□□ -1.61
PRP40YKL012W YHR218WP38899 603 aa5□□□□□ -1.61
PRP40YKL012W LOH1P47055 219 aa5□□□□□ -1.61
PRP40YKL012W ALF1P53904 254 aa5□□□□□ -1.61
PRP40YKL012W MYO3P36006 1272 aa4.99□□□□□ -1.61
PRP40YKL012W IST2P38250 946 aa4.99□□□□□ -1.61
PRP40YKL012W UTP25P40498 721 aaKnown RBP4.99□□□□□ -1.61
PRP40YKL012W NCA3P46955 337 aa4.99□□□□□ -1.61
PRP40YKL012W APC4Q04601 652 aa4.99□□□□□ -1.61
PRP40YKL012W BUR2Q05949 395 aa4.99□□□□□ -1.61
PRP40YKL012W LOT6Q07923 191 aa4.99□□□□□ -1.61
PRP40YKL012W MEX67Q99257 599 aaKnown RBP4.99□□□□□ -1.61
PRP40YKL012W DET1Q99288 334 aaKnown RBP4.99□□□□□ -1.61
PRP40YKL012W RAD1P06777 1100 aa4.99□□□□□ -1.61
PRP40YKL012W YUR1P26725 428 aa4.99□□□□□ -1.61
PRP40YKL012W DPH5P32469 300 aaPredicted RBP4.99□□□□□ -1.61
PRP40YKL012W YKL070WP36087 169 aa4.99□□□□□ -1.61
PRP40YKL012W PEX18P38855 283 aa4.99□□□□□ -1.61
PRP40YKL012W RBG1P39729 369 aa4.99□□□□□ -1.61
PRP40YKL012W GTO1P48239 356 aa4.99□□□□□ -1.61
PRP40YKL012W NAS6P50086 228 aa4.99□□□□□ -1.61
PRP40YKL012W CRZ1P53968 678 aa4.99□□□□□ -1.61
PRP40YKL012W YRM1Q12340 786 aa4.99□□□□□ -1.61
PRP40YKL012W YCR024C-BQ3E7Z8 88 aa4.99□□□□□ -1.61
PRP40YKL012W SNQ2P32568 1501 aaKnown RBP4.98□□□□□ -1.61
PRP40YKL012W NUP170P38181 1502 aa4.98□□□□□ -1.61
PRP40YKL012W CYC3P06182 269 aa4.98□□□□□ -1.61
PRP40YKL012W CAR2P07991 424 aaKnown RBP4.98□□□□□ -1.61
PRP40YKL012W VMA5P31412 392 aaKnown RBP4.98□□□□□ -1.61
PRP40YKL012W AGA1P32323 725 aa4.98□□□□□ -1.61
PRP40YKL012W KEG1P43614 200 aa4.98□□□□□ -1.61
PRP40YKL012W YGL185CP53100 379 aa4.98□□□□□ -1.61
PRP40YKL012W MRM2P53123 320 aa4.98□□□□□ -1.61
PRP40YKL012W KAP95Q06142 861 aaKnown RBP4.98□□□□□ -1.61
PRP40YKL012W YLH47Q06493 454 aa4.98□□□□□ -1.61
PRP40YKL012W ESA1Q08649 445 aa4.98□□□□□ -1.61
PRP40YKL012W ULS1Q08562 1619 aa4.97□□□□□ -1.61
PRP40YKL012W STE2D6VTK4 431 aa4.97□□□□□ -1.61
PRP40YKL012W RAD23P32628 398 aaKnown RBP4.97□□□□□ -1.61
PRP40YKL012W RAD5P32849 1169 aaPredicted RBP4.97□□□□□ -1.61
PRP40YKL012W YHR182WP38870 785 aa4.97□□□□□ -1.61
PRP40YKL012W PRM5P40476 318 aa4.97□□□□□ -1.61
PRP40YKL012W YIL029CP40538 142 aa4.97□□□□□ -1.61
PRP40YKL012W NUP116Q02630 1113 aa4.97□□□□□ -1.61
PRP40YKL012W RVB1Q03940 463 aaKnown RBP4.97□□□□□ -1.61
PRP40YKL012W DNL4Q08387 944 aaPredicted RBP4.97□□□□□ -1.61
PRP40YKL012W PIS1P06197 220 aaKnown RBP4.96□□□□□ -1.61
PRP40YKL012W CPR4P25334 318 aa4.96□□□□□ -1.61
PRP40YKL012W PRO3P32263 286 aaKnown RBP4.96□□□□□ -1.61
PRP40YKL012W IML3P38265 245 aa4.96□□□□□ -1.61
PRP40YKL012W FET3P38993 636 aa4.96□□□□□ -1.61
PRP40YKL012W WWM1P43582 211 aaKnown RBP4.96□□□□□ -1.61
PRP40YKL012W TRF5P48561 642 aaKnown RBP4.96□□□□□ -1.61
PRP40YKL012W YGR168CP53293 376 aa4.96□□□□□ -1.61
PRP40YKL012W MTM1P53320 366 aa4.96□□□□□ -1.61
PRP40YKL012W YMR102CQ03177 834 aa4.96□□□□□ -1.61
PRP40YKL012W HER2Q03557 464 aa4.96□□□□□ -1.61
PRP40YKL012W YCL021W-AQ96VH3 125 aa4.96□□□□□ -1.61
PRP40YKL012W TRP1P00912 224 aa4.96□□□□□ -1.62
PRP40YKL012W MEK1P24719 497 aaPredicted RBP4.96□□□□□ -1.62
PRP40YKL012W MKK1P32490 508 aa4.96□□□□□ -1.62
PRP40YKL012W KAR9P32526 644 aa4.96□□□□□ -1.62
PRP40YKL012W RPC25P35718 212 aa4.96□□□□□ -1.62
PRP40YKL012W LCB3P47013 409 aa4.96□□□□□ -1.62
PRP40YKL012W TAF6P53040 516 aa4.96□□□□□ -1.62
PRP40YKL012W MND1P53102 219 aa4.96□□□□□ -1.62
PRP40YKL012W PRM6Q04705 352 aa4.96□□□□□ -1.62
PRP40YKL012W PPT2Q12036 173 aa4.96□□□□□ -1.62
PRP40YKL012W LDB17Q12342 491 aa4.96□□□□□ -1.62
PRP40YKL012W INA22P40576 216 aa4.95□□□□□ -1.62
PRP40YKL012W YML122CQ03207 126 aa4.95□□□□□ -1.62
PRP40YKL012W CSM3Q04659 317 aa4.95□□□□□ -1.62
PRP40YKL012W SMC5Q08204 1093 aa4.95□□□□□ -1.62
PRP40YKL012W EAF3Q12432 401 aa4.95□□□□□ -1.62
PRP40YKL012W PDR15Q04182 1529 aaKnown RBP4.95□□□□□ -1.62
PRP40YKL012W SSA3P09435 649 aaKnown RBP4.94□□□□□ -1.62
PRP40YKL012W ERG9P29704 444 aa4.94□□□□□ -1.62
PRP40YKL012W HXT1P32465 570 aa4.94□□□□□ -1.62
PRP40YKL012W SDH3P33421 198 aa4.94□□□□□ -1.62
PRP40YKL012W YUH1P35127 236 aa4.94□□□□□ -1.62
PRP40YKL012W YIL067CP40514 678 aa4.94□□□□□ -1.62
PRP40YKL012W RRN5Q02983 363 aa4.94□□□□□ -1.62
PRP40YKL012W TDA1Q03533 586 aa4.94□□□□□ -1.62
PRP40YKL012W YPR1Q12458 312 aa4.94□□□□□ -1.62
PRP40YKL012W TY1B-JR2P47100 1755 aaKnown RBP4.94□□□□□ -1.62
PRP40YKL012W TY1B-ER2Q03619 1755 aa4.94□□□□□ -1.62
PRP40YKL012W TY1B-MR1Q04214 1755 aa4.94□□□□□ -1.62
PRP40YKL012W TY1B-MR2Q04670 1755 aaKnown RBP4.94□□□□□ -1.62
PRP40YKL012W TY1B-LR1Q12088 1755 aaKnown RBP4.94□□□□□ -1.62
PRP40YKL012W TY1B-NL1Q12112 1755 aa4.94□□□□□ -1.62
PRP40YKL012W TY1B-GR1Q12141 1755 aa4.94□□□□□ -1.62
PRP40YKL012W TY1B-BLQ12490 1755 aa4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms