RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C PLP2Q12017 286 aa2.09□□□□□ -2.07
TPM2YIL138C TFB5Q3E7C1 72 aaPredicted RBP2.09□□□□□ -2.07
TPM2YIL138C SPT7P35177 1332 aa2.09□□□□□ -2.08
TPM2YIL138C MMS1Q06211 1407 aa2.08□□□□□ -2.08
TPM2YIL138C RPO21P04050 1733 aaKnown RBP2.08□□□□□ -2.08
TPM2YIL138C SCH9P11792 824 aaKnown RBP2.08□□□□□ -2.08
TPM2YIL138C RPB5P20434 215 aa2.08□□□□□ -2.08
TPM2YIL138C AAT2P23542 418 aaKnown RBP2.08□□□□□ -2.08
TPM2YIL138C PRR1P28708 518 aa2.08□□□□□ -2.08
TPM2YIL138C TIR2P33890 251 aa2.08□□□□□ -2.08
TPM2YIL138C YHR177WP38867 453 aa2.08□□□□□ -2.08
TPM2YIL138C YNL208WP40159 199 aaKnown RBP2.08□□□□□ -2.08
TPM2YIL138C SNL1P40548 159 aa2.08□□□□□ -2.08
TPM2YIL138C CLD1P53264 445 aa2.08□□□□□ -2.08
TPM2YIL138C RRN9P53437 365 aa2.08□□□□□ -2.08
TPM2YIL138C YPR091CQ06833 770 aa2.08□□□□□ -2.08
TPM2YIL138C NFI1Q12216 726 aa2.08□□□□□ -2.08
TPM2YIL138C PCL9Q12477 304 aa2.08□□□□□ -2.08
TPM2YIL138C SKS1Q12505 502 aa2.08□□□□□ -2.08
TPM2YIL138C NAG1Q8TGN9 163 aa2.08□□□□□ -2.08
TPM2YIL138C NUP157P40064 1391 aaKnown RBP2.08□□□□□ -2.08
TPM2YIL138C PDR5P33302 1511 aaKnown RBP2.07□□□□□ -2.08
TPM2YIL138C ARO1P08566 1588 aaKnown RBP2.07□□□□□ -2.08
TPM2YIL138C YBT1P32386 1661 aa2.07□□□□□ -2.08
TPM2YIL138C PRB1P09232 635 aa2.07□□□□□ -2.08
TPM2YIL138C PHO84P25297 587 aaKnown RBP2.07□□□□□ -2.08
TPM2YIL138C PSO2P30620 661 aa2.07□□□□□ -2.08
TPM2YIL138C NUP2P32499 720 aa2.07□□□□□ -2.08
TPM2YIL138C VPH1P32563 840 aaKnown RBP2.07□□□□□ -2.08
TPM2YIL138C LAS1P36146 502 aaPredicted RBP2.07□□□□□ -2.08
TPM2YIL138C OXA1P39952 402 aa2.07□□□□□ -2.08
TPM2YIL138C UTP18P40362 594 aaPredicted RBP2.07□□□□□ -2.08
TPM2YIL138C DFG10P40526 253 aa2.07□□□□□ -2.08
TPM2YIL138C GAB1P41733 394 aa2.07□□□□□ -2.08
TPM2YIL138C YMR010WQ03687 405 aa2.07□□□□□ -2.08
TPM2YIL138C CMS1Q07897 291 aaKnown RBP2.07□□□□□ -2.08
TPM2YIL138C PEX27Q08580 376 aa2.07□□□□□ -2.08
TPM2YIL138C FCY22Q12119 530 aa2.07□□□□□ -2.08
TPM2YIL138C MEX67Q99257 599 aaKnown RBP2.07□□□□□ -2.08
TPM2YIL138C LTE1P07866 1435 aa2.07□□□□□ -2.08
TPM2YIL138C DAP2P18962 818 aa2.06□□□□□ -2.08
TPM2YIL138C MRPL8P22353 238 aa2.06□□□□□ -2.08
TPM2YIL138C UBA1P22515 1024 aaKnown RBP2.06□□□□□ -2.08
TPM2YIL138C ADH5P38113 351 aaKnown RBP2.06□□□□□ -2.08
TPM2YIL138C BAT1P38891 393 aaKnown RBP2.06□□□□□ -2.08
TPM2YIL138C PTI1P39927 425 aaPredicted RBP2.06□□□□□ -2.08
TPM2YIL138C SEC27P41811 889 aaKnown RBP2.06□□□□□ -2.08
TPM2YIL138C BNS1P50084 137 aa2.06□□□□□ -2.08
TPM2YIL138C VHS1Q03785 461 aa2.06□□□□□ -2.08
TPM2YIL138C NOP6Q07623 225 aaKnown RBP2.06□□□□□ -2.08
TPM2YIL138C IES4Q08561 116 aa2.06□□□□□ -2.08
TPM2YIL138C BI3Q9ZZW7 517 aa2.06□□□□□ -2.08
TPM2YIL138C BUD3P25558 1636 aa2.06□□□□□ -2.08
TPM2YIL138C FAA1P30624 700 aaKnown RBP2.05□□□□□ -2.08
TPM2YIL138C MSK1P32048 576 aa2.05□□□□□ -2.08
TPM2YIL138C SSE1P32589 693 aaKnown RBP2.05□□□□□ -2.08
TPM2YIL138C IES6P32617 166 aa2.05□□□□□ -2.08
TPM2YIL138C TOA2P32774 122 aa2.05□□□□□ -2.08
TPM2YIL138C SPO23P33757 523 aa2.05□□□□□ -2.08
TPM2YIL138C SEC9P40357 651 aa2.05□□□□□ -2.08
TPM2YIL138C LYS12P40495 371 aaKnown RBP2.05□□□□□ -2.08
TPM2YIL138C ATG18P43601 500 aa2.05□□□□□ -2.08
TPM2YIL138C ABM1P47146 123 aa2.05□□□□□ -2.08
TPM2YIL138C TRF5P48561 642 aaKnown RBP2.05□□□□□ -2.08
TPM2YIL138C MPS2P53159 387 aa2.05□□□□□ -2.08
TPM2YIL138C YET2Q04210 160 aa2.05□□□□□ -2.08
TPM2YIL138C YDL114WQ07530 308 aa2.05□□□□□ -2.08
TPM2YIL138C SHS1Q07657 551 aa2.05□□□□□ -2.08
TPM2YIL138C MFG1Q07684 458 aa2.05□□□□□ -2.08
TPM2YIL138C GLE1Q12315 538 aa2.05□□□□□ -2.08
TPM2YIL138C YDL199CQ12407 687 aa2.05□□□□□ -2.08
TPM2YIL138C YOR338WQ99326 363 aa2.05□□□□□ -2.08
TPM2YIL138C TRM3Q07527 1436 aa2.05□□□□□ -2.08
TPM2YIL138C SPO14P36126 1683 aa2.05□□□□□ -2.08
TPM2YIL138C YRF1-1P0CX20 1796 aa2.05□□□□□ -2.08
TPM2YIL138C YRF1-5P0CX21 1796 aa2.05□□□□□ -2.08
TPM2YIL138C YRF1-8P0CX22 1796 aa2.05□□□□□ -2.08
TPM2YIL138C DBR1P24309 405 aaKnown RBP2.04□□□□□ -2.08
TPM2YIL138C FUN26P31381 517 aa2.04□□□□□ -2.08
TPM2YIL138C EFB1P32471 206 aaKnown RBP2.04□□□□□ -2.08
TPM2YIL138C PTK1P36002 662 aaPredicted RBP2.04□□□□□ -2.08
TPM2YIL138C AIP1P46680 615 aaKnown RBP2.04□□□□□ -2.08
TPM2YIL138C RPA34P47006 233 aaPredicted RBP2.04□□□□□ -2.08
TPM2YIL138C CUE3P53137 624 aaKnown RBP2.04□□□□□ -2.08
TPM2YIL138C YNR068CP53754 272 aa2.04□□□□□ -2.08
TPM2YIL138C YNL143CP53908 130 aa2.04□□□□□ -2.08
TPM2YIL138C AQR1P53943 586 aa2.04□□□□□ -2.08
TPM2YIL138C REX2P54964 269 aaKnown RBP2.04□□□□□ -2.08
TPM2YIL138C ECM11Q04110 302 aa2.04□□□□□ -2.08
TPM2YIL138C AIM33Q04516 312 aa2.04□□□□□ -2.08
TPM2YIL138C HMS1Q12398 434 aa2.04□□□□□ -2.08
TPM2YIL138C GCN2P15442 1659 aa2.03□□□□□ -2.08
TPM2YIL138C STE3P06783 470 aa2.03□□□□□ -2.08
TPM2YIL138C RPS18AP0CX55 146 aaKnown RBP2.03□□□□□ -2.08
TPM2YIL138C RPS18BP0CX56 146 aaPredicted RBP2.03□□□□□ -2.08
TPM2YIL138C MAS1P10507 462 aa2.03□□□□□ -2.08
TPM2YIL138C OPI1P21957 404 aa2.03□□□□□ -2.08
TPM2YIL138C CDC50P25656 391 aa2.03□□□□□ -2.08
TPM2YIL138C POT1P27796 417 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
TPM2YIL138C SMI1P32566 505 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms