RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	CDC37	P06101	506 aa	Known RBP	3.38	□□□□□ -1.87
YPT35	YHR105W	CDC10	P25342	322 aa	Known RBP	3.38	□□□□□ -1.87
YPT35	YHR105W	RIB5	P38145	238 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	YHR122W	P38829	231 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	PCL7	P40186	285 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	JLP2	P40206	208 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	SPG5	P42933	373 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	SAD1	P43589	448 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	SFH5	P47008	294 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	RET3	P53600	189 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	ERV25	P54837	211 aa	Known RBP	3.38	□□□□□ -1.87
YPT35	YHR105W	UBX2	Q04228	584 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	BCH1	Q05029	724 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	LDS2	Q08218	356 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	SNX3	Q08826	162 aa	Known RBP	3.38	□□□□□ -1.87
YPT35	YHR105W	NDD1	Q08887	554 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	TPT1	Q12272	230 aa	Known RBP	3.38	□□□□□ -1.87
YPT35	YHR105W	YIL177C	P40434	1758 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	YJL225C	P40889	1758 aa		3.38	□□□□□ -1.87
YPT35	YHR105W	VPS63	O13549	108 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	CAP2	P13517	287 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	THR4	P16120	514 aa	Known RBP	3.37	□□□□□ -1.87
YPT35	YHR105W	DBP3	P20447	523 aa	Known RBP	3.37	□□□□□ -1.87
YPT35	YHR105W	CKI1	P20485	582 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	EXG1	P23776	448 aa	Known RBP	3.37	□□□□□ -1.87
YPT35	YHR105W	GRR1	P24814	1151 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	MSK1	P32048	576 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	LCP5	P40079	357 aa	Predicted RBP	3.37	□□□□□ -1.87
YPT35	YHR105W	ATM1	P40416	690 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	YJL213W	P40896	331 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	SSN8	P47821	323 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	YGR117C	P53270	476 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	GOR1	P53839	350 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	YMR181C	Q03231	154 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	VTI1	Q04338	217 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	RAX1	Q08760	435 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	SAC3	P46674	1301 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	RSF2	P46974	1380 aa		3.37	□□□□□ -1.87
YPT35	YHR105W	TPK3	P05986	398 aa		3.36	□□□□□ -1.87
YPT35	YHR105W	ARF1	P11076	181 aa	Known RBP	3.36	□□□□□ -1.87
YPT35	YHR105W	GCD2	P12754	651 aa	Predicted RBP	3.36	□□□□□ -1.87
YPT35	YHR105W	HXT2	P23585	541 aa		3.36	□□□□□ -1.87
YPT35	YHR105W	YCL068C	P25593	260 aa		3.36	□□□□□ -1.87
YPT35	YHR105W	NAT2	P37293	288 aa		3.36	□□□□□ -1.87
YPT35	YHR105W	GPX2	P38143	162 aa		3.36	□□□□□ -1.87
YPT35	YHR105W	CHK1	P38147	527 aa		3.36	□□□□□ -1.87
YPT35	YHR105W	SIP3	P38717	1229 aa		3.36	□□□□□ -1.87
YPT35	YHR105W	YIL001W	P40560	513 aa		3.36	□□□□□ -1.87
YPT35	YHR105W	MSC3	Q05812	728 aa		3.36	□□□□□ -1.87
YPT35	YHR105W	SPO24	Q3E752	67 aa		3.36	□□□□□ -1.87
YPT35	YHR105W	SSK22	P25390	1331 aa	Predicted RBP	3.36	□□□□□ -1.87
YPT35	YHR105W	UTP10	P42945	1769 aa	Known RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	CBP2	P03874	630 aa	Predicted RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
YPT35	YHR105W	SUP35	P05453	685 aa	Known RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	CYC3	P06182	269 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	ATP1	P07251	545 aa	Known RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	GDH1	P07262	454 aa	Known RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	MAS1	P10507	462 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	CPR1	P14832	162 aa	Known RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	PHA2	P32452	334 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	MRP4	P32902	394 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	UBC6	P33296	250 aa	Predicted RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	SPT10	P35208	640 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	DOA1	P36037	715 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	ATP3	P38077	311 aa	Known RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	CTM1	P38818	585 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	ALP1	P38971	573 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	AIM20	P40451	204 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	SHQ1	P40486	507 aa	Predicted RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	MKT1	P40850	830 aa	Known RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	MSO1	P53604	210 aa	Known RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	CCE1	Q03702	353 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	YMR310C	Q04867	317 aa	Predicted RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	FAR8	Q05040	523 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	CUR1	Q06469	252 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	TSR1	Q07381	788 aa	Known RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	GAT3	Q07928	141 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	ALE1	Q08548	619 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	ABP140	Q08641	628 aa	Known RBP	3.35	□□□□□ -1.87
YPT35	YHR105W	YOP1	Q12402	180 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	YCL021W-A	Q96VH3	125 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	FSH3	Q99369	266 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	POM152	P39685	1337 aa		3.35	□□□□□ -1.87
YPT35	YHR105W	GAL3	P13045	520 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	BMH1	P29311	267 aa	Known RBP	3.34	□□□□□ -1.87
YPT35	YHR105W	YEF1	P32622	495 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	VAM7	P32912	316 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	PPQ1	P32945	549 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	YET1	P35723	206 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.87	not detected
YPT35	YHR105W	YBL028C	P38202	106 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	YBP1	P38315	674 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	TIF5	P38431	405 aa	Known RBP	3.34	□□□□□ -1.87
YPT35	YHR105W	SBE22	P38814	852 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	MDM31	P38880	579 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	GVP36	P40531	326 aa	Known RBP	3.34	□□□□□ -1.87
YPT35	YHR105W	SPR6	Q01684	191 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	INP2	Q03824	705 aa		3.34	□□□□□ -1.87
YPT35	YHR105W	GRX3	Q03835	250 aa		3.34	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms