RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C SSC1P0CS90 654 aaKnown RBP1.17□□□□□ -2.22
SWI4YER111C MCK1P21965 375 aaKnown RBP1.17□□□□□ -2.22
SWI4YER111C MRPL8P22353 238 aa1.17□□□□□ -2.22
SWI4YER111C PET18P25362 215 aa1.17□□□□□ -2.22
SWI4YER111C TIR2P33890 251 aa1.17□□□□□ -2.22
SWI4YER111C MYO3P36006 1272 aa1.17□□□□□ -2.22
SWI4YER111C DSE1P40077 573 aa1.17□□□□□ -2.22
SWI4YER111C MAM33P40513 266 aa1.17□□□□□ -2.22
SWI4YER111C YJR030CP47101 745 aa1.17□□□□□ -2.22
SWI4YER111C CRZ1P53968 678 aa1.17□□□□□ -2.22
SWI4YER111C NAT4Q04751 285 aa1.17□□□□□ -2.22
SWI4YER111C BCH1Q05029 724 aa1.17□□□□□ -2.22
SWI4YER111C TPT1Q12272 230 aaKnown RBP1.17□□□□□ -2.22
SWI4YER111C CEX1Q12453 761 aa1.17□□□□□ -2.22
SWI4YER111C YRF1-3P0CX14 1859 aa1.17□□□□□ -2.22
SWI4YER111C YRF1-7P0CX15 1859 aa1.17□□□□□ -2.22
SWI4YER111C YRF1-6P53819 1859 aa1.17□□□□□ -2.22
SWI4YER111C PUT3P25502 979 aaPredicted RBP1.16□□□□□ -2.22
SWI4YER111C DEG1P31115 442 aaKnown RBP1.16□□□□□ -2.22
SWI4YER111C LOS1P33418 1100 aaPredicted RBP1.16□□□□□ -2.22
SWI4YER111C YUH1P35127 236 aa1.16□□□□□ -2.22
SWI4YER111C IML3P38265 245 aa1.16□□□□□ -2.22
SWI4YER111C NDT80P38830 627 aa1.16□□□□□ -2.22
SWI4YER111C COX14P39103 70 aa1.16□□□□□ -2.22
SWI4YER111C RPH1P39956 796 aa1.16□□□□□ -2.22
SWI4YER111C RPR2P40571 144 aa1.16□□□□□ -2.22
SWI4YER111C YJL213WP40896 331 aa1.16□□□□□ -2.22
SWI4YER111C HAC1P41546 238 aa1.16□□□□□ -2.22
SWI4YER111C GCD10P41814 478 aa1.16□□□□□ -2.22
SWI4YER111C YGL185CP53100 379 aa1.16□□□□□ -2.22
SWI4YER111C ARK1P53974 638 aa1.16□□□□□ -2.22
SWI4YER111C HER2Q03557 464 aa1.16□□□□□ -2.22
SWI4YER111C SLF1Q12034 447 aaKnown RBP1.16□□□□□ -2.22
SWI4YER111C YOL107WQ12239 342 aa1.16□□□□□ -2.22
SWI4YER111C YLR108CQ12259 485 aa1.16□□□□□ -2.22
SWI4YER111C RGT2Q12300 763 aa1.16□□□□□ -2.22
SWI4YER111C UGA1P17649 471 aa1.16□□□□□ -2.22
SWI4YER111C SPS22P25380 463 aa1.16□□□□□ -2.22
SWI4YER111C MXR2P25566 168 aa1.16□□□□□ -2.22
SWI4YER111C VMA5P31412 392 aaKnown RBP1.16□□□□□ -2.22
SWI4YER111C RAD5P32849 1169 aaPredicted RBP1.16□□□□□ -2.22
SWI4YER111C YND1P40009 630 aa1.16□□□□□ -2.22
SWI4YER111C SEC27P41811 889 aaKnown RBP1.16□□□□□ -2.22
SWI4YER111C RET3P53600 189 aa1.16□□□□□ -2.22
SWI4YER111C HCH1P53834 153 aa1.16□□□□□ -2.22
SWI4YER111C HXT11P54862 567 aa1.16□□□□□ -2.22
SWI4YER111C YML122CQ03207 126 aa1.16□□□□□ -2.22
SWI4YER111C CSI1Q04368 295 aa1.16□□□□□ -2.22
SWI4YER111C STE23Q06010 1027 aa1.16□□□□□ -2.22
SWI4YER111C DCP1Q12517 231 aaPredicted RBP1.16□□□□□ -2.22
SWI4YER111C RRP12Q12754 1228 aaKnown RBP1.16□□□□□ -2.22
SWI4YER111C RIM15P43565 1770 aa1.16□□□□□ -2.22
SWI4YER111C TSC11P40061 1430 aa1.16□□□□□ -2.22
SWI4YER111C RPL15AP05748 204 aaKnown RBP1.16□□□□□ -2.22
SWI4YER111C PIS1P06197 220 aaKnown RBP1.16□□□□□ -2.22
SWI4YER111C RNA1P11745 407 aaKnown RBP1.16□□□□□ -2.22
SWI4YER111C ITR2P30606 609 aa1.16□□□□□ -2.22
SWI4YER111C AGA1P32323 725 aa1.16□□□□□ -2.22
SWI4YER111C YEF1P32622 495 aa1.16□□□□□ -2.22
SWI4YER111C YBR139WP38109 508 aa1.16□□□□□ -2.22
SWI4YER111C YBP1P38315 674 aa1.16□□□□□ -2.22
SWI4YER111C MMS21P38632 267 aa1.16□□□□□ -2.22
SWI4YER111C TDA11P38854 504 aa1.16□□□□□ -2.22
SWI4YER111C SIM1P40472 476 aa1.16□□□□□ -2.22
SWI4YER111C DFG10P40526 253 aa1.16□□□□□ -2.22
SWI4YER111C RRT5P43607 289 aa1.16□□□□□ -2.22
SWI4YER111C TOS2P50078 622 aa1.16□□□□□ -2.22
SWI4YER111C RIB4P50861 169 aaPredicted RBP1.16□□□□□ -2.22
SWI4YER111C MND1P53102 219 aa1.16□□□□□ -2.22
SWI4YER111C MRM2P53123 320 aa1.16□□□□□ -2.22
SWI4YER111C LSC1P53598 329 aaKnown RBP1.16□□□□□ -2.22
SWI4YER111C MPP6P53725 186 aaPredicted RBP1.16□□□□□ -2.22
SWI4YER111C DBP6P53734 629 aaKnown RBP1.16□□□□□ -2.22
SWI4YER111C MTQ1P53944 314 aa1.16□□□□□ -2.22
SWI4YER111C YNL050CP53952 270 aa1.16□□□□□ -2.22
SWI4YER111C RRN5Q02983 363 aa1.16□□□□□ -2.22
SWI4YER111C SRL1Q08673 210 aa1.16□□□□□ -2.22
SWI4YER111C AFT2Q08957 416 aa1.16□□□□□ -2.22
SWI4YER111C BTS1Q12051 335 aa1.16□□□□□ -2.22
SWI4YER111C MAS2P11914 482 aa1.15□□□□□ -2.22
SWI4YER111C ATR1P13090 542 aa1.15□□□□□ -2.22
SWI4YER111C ARF2P19146 181 aaKnown RBP1.15□□□□□ -2.22
SWI4YER111C VPS1P21576 704 aaKnown RBP1.15□□□□□ -2.22
SWI4YER111C TMT1P32643 299 aa1.15□□□□□ -2.22
SWI4YER111C COT1P32798 439 aa1.15□□□□□ -2.22
SWI4YER111C BUD2P33314 1104 aa1.15□□□□□ -2.22
SWI4YER111C MCR1P36060 302 aaKnown RBP1.15□□□□□ -2.22
SWI4YER111C GPX2P38143 162 aa1.15□□□□□ -2.22
SWI4YER111C WSC4P38739 605 aa1.15□□□□□ -2.22
SWI4YER111C SBE22P38814 852 aa1.15□□□□□ -2.22
SWI4YER111C YPT35P38815 214 aaKnown RBP1.15□□□□□ -2.22
SWI4YER111C YHR131CP38835 850 aa1.15□□□□□ -2.22
SWI4YER111C ATG7P38862 630 aa1.15□□□□□ -2.22
SWI4YER111C MDM31P38880 579 aa1.15□□□□□ -2.22
SWI4YER111C BTT1P40314 149 aaPredicted RBP1.15□□□□□ -2.22
SWI4YER111C ATC1Q04005 294 aa1.15□□□□□ -2.22
SWI4YER111C MSC3Q05812 728 aa1.15□□□□□ -2.22
SWI4YER111C PBP4Q07362 185 aaKnown RBP1.15□□□□□ -2.22
SWI4YER111C GAT3Q07928 141 aa1.15□□□□□ -2.22
SWI4YER111C YDR262WQ12331 272 aa1.15□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms