RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C PMT2P31382 759 aa1.88□□□□□ -2.11
SMB1YER029C PRY2P36110 329 aa1.88□□□□□ -2.11
SMB1YER029C WSC4P38739 605 aa1.88□□□□□ -2.11
SMB1YER029C LRP1P38801 184 aaKnown RBP1.88□□□□□ -2.11
SMB1YER029C PEX22P39718 180 aa1.88□□□□□ -2.11
SMB1YER029C RSC1P53236 928 aa1.88□□□□□ -2.11
SMB1YER029C IGO1P53897 168 aa1.88□□□□□ -2.11
SMB1YER029C MIR1P23641 311 aaKnown RBP1.87□□□□□ -2.11
SMB1YER029C LDS1P31379 325 aa1.87□□□□□ -2.11
SMB1YER029C MDL1P33310 695 aa1.87□□□□□ -2.11
SMB1YER029C SHE3P38272 425 aaKnown RBP1.87□□□□□ -2.11
SMB1YER029C YJR054WP47114 497 aa1.87□□□□□ -2.11
SMB1YER029C RMI1Q02685 241 aa1.87□□□□□ -2.11
SMB1YER029C SCS7Q03529 384 aa1.87□□□□□ -2.11
SMB1YER029C FSH2Q05015 223 aa1.87□□□□□ -2.11
SMB1YER029C YLH47Q06493 454 aa1.87□□□□□ -2.11
SMB1YER029C SRO7Q12038 1033 aa1.87□□□□□ -2.11
SMB1YER029C HMS1Q12398 434 aa1.87□□□□□ -2.11
SMB1YER029C ERP4Q12450 207 aa1.87□□□□□ -2.11
SMB1YER029C PAR32Q12515 295 aaKnown RBP1.87□□□□□ -2.11
SMB1YER029C SRN2Q99176 213 aa1.87□□□□□ -2.11
SMB1YER029C RPS16AP0CX51 143 aaKnown RBP1.86□□□□□ -2.11
SMB1YER029C RPS16BP0CX52 143 aaKnown RBP1.86□□□□□ -2.11
SMB1YER029C FAR1P21268 830 aa1.86□□□□□ -2.11
SMB1YER029C MRPL8P22353 238 aa1.86□□□□□ -2.11
SMB1YER029C PSO2P30620 661 aa1.86□□□□□ -2.11
SMB1YER029C AGA2P32781 87 aa1.86□□□□□ -2.11
SMB1YER029C KAP104P38217 918 aaKnown RBP1.86□□□□□ -2.11
SMB1YER029C YER184CP39961 794 aa1.86□□□□□ -2.11
SMB1YER029C LCP5P40079 357 aaPredicted RBP1.86□□□□□ -2.11
SMB1YER029C YJL055WP47044 245 aa1.86□□□□□ -2.11
SMB1YER029C RET3P53600 189 aa1.86□□□□□ -2.11
SMB1YER029C RNH201P53942 307 aa1.86□□□□□ -2.11
SMB1YER029C VPS9P54787 451 aa1.86□□□□□ -2.11
SMB1YER029C YPS3Q12303 508 aa1.86□□□□□ -2.11
SMB1YER029C DET1Q99288 334 aaKnown RBP1.86□□□□□ -2.11
SMB1YER029C RPS14AP06367 137 aaKnown RBP1.85□□□□□ -2.11
SMB1YER029C DBR1P24309 405 aaKnown RBP1.85□□□□□ -2.11
SMB1YER029C SSE1P32589 693 aaKnown RBP1.85□□□□□ -2.11
SMB1YER029C RPS14BP39516 138 aaKnown RBP1.85□□□□□ -2.11
SMB1YER029C FRT2P39734 528 aa1.85□□□□□ -2.11
SMB1YER029C EFM3P47163 339 aa1.85□□□□□ -2.11
SMB1YER029C COQ5P49017 307 aa1.85□□□□□ -2.11
SMB1YER029C MLC1P53141 149 aa1.85□□□□□ -2.11
SMB1YER029C CDH1P53197 566 aa1.85□□□□□ -2.11
SMB1YER029C YPL107WQ02873 248 aa1.85□□□□□ -2.11
SMB1YER029C AIM45Q12480 344 aaKnown RBP1.85□□□□□ -2.11
SMB1YER029C ASP3-2P0CX77 362 aa1.84□□□□□ -2.11
SMB1YER029C ASP3-3P0CX78 362 aa1.84□□□□□ -2.11
SMB1YER029C ASP3-4P0CX79 362 aa1.84□□□□□ -2.11
SMB1YER029C ASP3-1P0CZ17 362 aa1.84□□□□□ -2.11
SMB1YER029C EPT1P22140 391 aa1.84□□□□□ -2.11
SMB1YER029C PUP2P32379 260 aa1.84□□□□□ -2.11
SMB1YER029C FMT1P32785 401 aa1.84□□□□□ -2.11
SMB1YER029C FRM2P37261 193 aa1.84□□□□□ -2.11
SMB1YER029C ECM34P38728 170 aa1.84□□□□□ -2.11
SMB1YER029C RRT13P40042 185 aa1.84□□□□□ -2.11
SMB1YER029C LYS12P40495 371 aaKnown RBP1.84□□□□□ -2.11
SMB1YER029C VEL1P53058 206 aa1.84□□□□□ -2.11
SMB1YER029C SED5Q01590 340 aa1.84□□□□□ -2.11
SMB1YER029C YFH1Q07540 174 aa1.84□□□□□ -2.11
SMB1YER029C SHS1Q07657 551 aa1.84□□□□□ -2.11
SMB1YER029C SFG1Q12507 346 aa1.84□□□□□ -2.11
SMB1YER029C DAP2P18962 818 aa1.83□□□□□ -2.12
SMB1YER029C MNE1P24720 663 aa1.83□□□□□ -2.12
SMB1YER029C GRR1P24814 1151 aa1.83□□□□□ -2.12
SMB1YER029C SPS19P32573 292 aaKnown RBP1.83□□□□□ -2.12
SMB1YER029C YKR015CP36111 568 aa1.83□□□□□ -2.12
SMB1YER029C DBP7P36120 742 aaKnown RBP1.83□□□□□ -2.12
SMB1YER029C YBR241CP38142 488 aa1.83□□□□□ -2.12
SMB1YER029C AIM23P47015 356 aa1.83□□□□□ -2.12
SMB1YER029C CPR7P47103 393 aa1.83□□□□□ -2.12
SMB1YER029C SUR7P54003 302 aa1.83□□□□□ -2.12
SMB1YER029C MRX11Q03079 207 aa1.83□□□□□ -2.12
SMB1YER029C TRM82Q03774 444 aa1.83□□□□□ -2.12
SMB1YER029C DDC1Q08949 612 aa1.83□□□□□ -2.12
SMB1YER029C FRE8Q12209 686 aa1.83□□□□□ -2.12
SMB1YER029C LDB17Q12342 491 aa1.83□□□□□ -2.12
SMB1YER029C YAL067W-AQ8TGK6 75 aa1.83□□□□□ -2.12
SMB1YER029C YOR338WQ99326 363 aa1.83□□□□□ -2.12
SMB1YER029C AUS1Q08409 1394 aa1.83□□□□□ -2.12
SMB1YER029C SCH9P11792 824 aaKnown RBP1.82□□□□□ -2.12
SMB1YER029C MSK1P32048 576 aa1.82□□□□□ -2.12
SMB1YER029C TIP20P33891 701 aa1.82□□□□□ -2.12
SMB1YER029C YSW1P38280 609 aa1.82□□□□□ -2.12
SMB1YER029C RCK2P38623 610 aa1.82□□□□□ -2.12
SMB1YER029C CWC22P53333 577 aaKnown RBP1.82□□□□□ -2.12
SMB1YER029C HST4P53688 370 aa1.82□□□□□ -2.12
SMB1YER029C SLT2Q00772 484 aa1.82□□□□□ -2.12
SMB1YER029C YMR010WQ03687 405 aa1.82□□□□□ -2.12
SMB1YER029C API2Q04413 109 aa1.82□□□□□ -2.12
SMB1YER029C AIM33Q04516 312 aa1.82□□□□□ -2.12
SMB1YER029C YDR018CQ12185 396 aa1.82□□□□□ -2.12
SMB1YER029C UBA3Q99344 299 aa1.82□□□□□ -2.12
SMB1YER029C EFB1P32471 206 aaKnown RBP1.81□□□□□ -2.12
SMB1YER029C IME2P32581 645 aa1.81□□□□□ -2.12
SMB1YER029C COS9P36034 407 aa1.81□□□□□ -2.12
SMB1YER029C YPT35P38815 214 aaKnown RBP1.81□□□□□ -2.12
SMB1YER029C ATG7P38862 630 aa1.81□□□□□ -2.12
SMB1YER029C GDI1P39958 451 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms