RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C HEM4P06174 275 aa-0.04□□□□□ -2.42
SPG3YDR504C DST1P07273 309 aa-0.04□□□□□ -2.42
SPG3YDR504C SRV2P17555 526 aaKnown RBP-0.04□□□□□ -2.42
SPG3YDR504C PMT2P31382 759 aa-0.04□□□□□ -2.42
SPG3YDR504C YER079WP40052 210 aaKnown RBP-0.04□□□□□ -2.42
SPG3YDR504C PIB2P53191 635 aa-0.04□□□□□ -2.42
SPG3YDR504C RRN9P53437 365 aa-0.04□□□□□ -2.42
SPG3YDR504C DIB1Q06819 143 aaPredicted RBP-0.04□□□□□ -2.42
SPG3YDR504C MMT2Q08970 484 aa-0.04□□□□□ -2.42
SPG3YDR504C YPL264CQ08980 353 aa-0.04□□□□□ -2.42
SPG3YDR504C YOP1Q12402 180 aa-0.04□□□□□ -2.42
SPG3YDR504C MEX67Q99257 599 aaKnown RBP-0.04□□□□□ -2.42
SPG3YDR504C NTC20P38302 140 aaPredicted RBP-0.05□□□□□ -2.42
SPG3YDR504C OTU2P38747 307 aaKnown RBP-0.05□□□□□ -2.42
SPG3YDR504C YFR045WP43617 309 aa-0.05□□□□□ -2.42
SPG3YDR504C YGL138CP53122 345 aa-0.05□□□□□ -2.42
SPG3YDR504C OCA2P53949 197 aa-0.05□□□□□ -2.42
SPG3YDR504C YDR018CQ12185 396 aa-0.05□□□□□ -2.42
SPG3YDR504C RPS14AP06367 137 aaKnown RBP-0.06□□□□□ -2.42
SPG3YDR504C BGL2P15703 313 aaKnown RBP-0.06□□□□□ -2.42
SPG3YDR504C SMF1P38925 575 aa-0.06□□□□□ -2.42
SPG3YDR504C RPS14BP39516 138 aaKnown RBP-0.06□□□□□ -2.42
SPG3YDR504C ECO1P43605 281 aa-0.06□□□□□ -2.42
SPG3YDR504C AIM23P47015 356 aa-0.06□□□□□ -2.42
SPG3YDR504C YDL109CQ12103 647 aa-0.06□□□□□ -2.42
SPG3YDR504C INO2P26798 304 aa-0.07□□□□□ -2.42
SPG3YDR504C ARO4P32449 370 aaKnown RBP-0.07□□□□□ -2.42
SPG3YDR504C VID27P40157 782 aa-0.07□□□□□ -2.42
SPG3YDR504C GAS2Q06135 555 aa-0.07□□□□□ -2.42
SPG3YDR504C GRX6Q12438 231 aa-0.07□□□□□ -2.42
SPG3YDR504C MRX4Q12467 430 aa-0.07□□□□□ -2.42
SPG3YDR504C RPL23AP0CX41 137 aaKnown RBP-0.08□□□□□ -2.42
SPG3YDR504C RPL23BP0CX42 137 aaKnown RBP-0.08□□□□□ -2.42
SPG3YDR504C MIR1P23641 311 aaKnown RBP-0.08□□□□□ -2.42
SPG3YDR504C RPL16AP26784 199 aaKnown RBP-0.08□□□□□ -2.42
SPG3YDR504C RCK1P38622 512 aa-0.08□□□□□ -2.42
SPG3YDR504C STE24P47154 453 aa-0.08□□□□□ -2.42
SPG3YDR504C SYF2P53277 215 aaPredicted RBP-0.08□□□□□ -2.42
SPG3YDR504C KAP120Q02932 1032 aa-0.08□□□□□ -2.42
SPG3YDR504C YMR244WQ04018 355 aa-0.08□□□□□ -2.42
SPG3YDR504C DFM1Q12743 341 aaKnown RBP-0.08□□□□□ -2.42
SPG3YDR504C UBR2Q07963 1872 aa-0.09□□□□□ -2.42
SPG3YDR504C ARG3P05150 338 aa-0.09□□□□□ -2.42
SPG3YDR504C YKR015CP36111 568 aa-0.09□□□□□ -2.42
SPG3YDR504C LSM4P40070 187 aaKnown RBP-0.09□□□□□ -2.42
SPG3YDR504C CWC22P53333 577 aaKnown RBP-0.09□□□□□ -2.42
SPG3YDR504C DCR2Q05924 578 aa-0.09□□□□□ -2.42
SPG3YDR504C YDR056CQ12025 205 aa-0.09□□□□□ -2.42
SPG3YDR504C TPK3P05986 398 aa-0.1□□□□□ -2.43
SPG3YDR504C ERG3P32353 365 aa-0.1□□□□□ -2.43
SPG3YDR504C TAE1P38340 232 aa-0.1□□□□□ -2.43
SPG3YDR504C CAK1P43568 368 aaPredicted RBP-0.1□□□□□ -2.43
SPG3YDR504C DSK2P48510 373 aa-0.1□□□□□ -2.43
SPG3YDR504C INM2Q05533 292 aa-0.1□□□□□ -2.43
SPG3YDR504C YAK1P14680 807 aa-0.11□□□□□ -2.43
SPG3YDR504C ZRT3P34240 503 aa-0.11□□□□□ -2.43
SPG3YDR504C FUI1P38196 639 aa-0.11□□□□□ -2.43
SPG3YDR504C FCY21P40039 528 aa-0.11□□□□□ -2.43
SPG3YDR504C SEC27P41811 889 aaKnown RBP-0.11□□□□□ -2.43
SPG3YDR504C SKO1Q02100 647 aa-0.11□□□□□ -2.43
SPG3YDR504C INP1Q03694 420 aa-0.11□□□□□ -2.43
SPG3YDR504C VPS68Q12016 184 aa-0.11□□□□□ -2.43
SPG3YDR504C VPS24P36095 224 aaKnown RBP-0.12□□□□□ -2.43
SPG3YDR504C RRG9P40156 214 aa-0.12□□□□□ -2.43
SPG3YDR504C ATM1P40416 690 aa-0.12□□□□□ -2.43
SPG3YDR504C PMT5P52867 743 aa-0.12□□□□□ -2.43
SPG3YDR504C CAX4P53223 239 aa-0.12□□□□□ -2.43
SPG3YDR504C SCS7Q03529 384 aa-0.12□□□□□ -2.43
SPG3YDR504C RPN9Q04062 393 aaKnown RBP-0.12□□□□□ -2.43
SPG3YDR504C DCS1Q06151 350 aa-0.12□□□□□ -2.43
SPG3YDR504C SSH4P32343 579 aa-0.13□□□□□ -2.43
SPG3YDR504C TOA2P32774 122 aa-0.13□□□□□ -2.43
SPG3YDR504C EFM1P38732 585 aa-0.13□□□□□ -2.43
SPG3YDR504C CTM1P38818 585 aa-0.13□□□□□ -2.43
SPG3YDR504C NAB3P38996 802 aaKnown RBP RIP-Chip data-0.13□□□□□ -2.43not detected
SPG3YDR504C RDS3Q06835 107 aaPredicted RBP-0.13□□□□□ -2.43
SPG3YDR504C TIM10P87108 93 aa-0.14□□□□□ -2.43
SPG3YDR504C MMR1Q06324 491 aa-0.14□□□□□ -2.43
SPG3YDR504C TY3A-GQ12173 290 aa-0.14□□□□□ -2.43
SPG3YDR504C TY3A-IQ99219 290 aa-0.14□□□□□ -2.43
SPG3YDR504C OPI3P05375 206 aa-0.15□□□□□ -2.43
SPG3YDR504C CDC21P06785 304 aa-0.15□□□□□ -2.43
SPG3YDR504C CLC1P17891 233 aa-0.15□□□□□ -2.43
SPG3YDR504C SCO1P23833 295 aa-0.15□□□□□ -2.43
SPG3YDR504C TPM2P40414 161 aa-0.15□□□□□ -2.43
SPG3YDR504C MIC19P43594 170 aa-0.15□□□□□ -2.43
SPG3YDR504C SSU72P53538 206 aaPredicted RBP-0.15□□□□□ -2.43
SPG3YDR504C PRP42Q03776 544 aaKnown RBP-0.15□□□□□ -2.43
SPG3YDR504C IES3Q12345 250 aa-0.15□□□□□ -2.43
SPG3YDR504C PWP2P25635 923 aaKnown RBP-0.16□□□□□ -2.44
SPG3YDR504C IST2P38250 946 aa-0.16□□□□□ -2.44
SPG3YDR504C INM1P38710 295 aa-0.16□□□□□ -2.44
SPG3YDR504C EFM3P47163 339 aa-0.16□□□□□ -2.44
SPG3YDR504C BNI5P53890 448 aaKnown RBP-0.16□□□□□ -2.44
SPG3YDR504C YMR166CQ03829 368 aa-0.16□□□□□ -2.44
SPG3YDR504C YMR130WQ04223 302 aa-0.16□□□□□ -2.44
SPG3YDR504C YOL159C-AQ3E769 90 aa-0.16□□□□□ -2.44
SPG3YDR504C ARO3P14843 370 aaKnown RBP-0.17□□□□□ -2.44
SPG3YDR504C SAS3P34218 831 aa-0.17□□□□□ -2.44
SPG3YDR504C YIL054WP40524 105 aa-0.17□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms