RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W HUA2Q12134 243 aa2.31□□□□□ -2.04
SNX41YDR425W MED11Q99278 115 aa2.31□□□□□ -2.04
SNX41YDR425W BI3Q9ZZW7 517 aa2.31□□□□□ -2.04
SNX41YDR425W YIL177CP40434 1758 aa2.31□□□□□ -2.04
SNX41YDR425W YJL225CP40889 1758 aa2.31□□□□□ -2.04
SNX41YDR425W SUC2P00724 532 aa2.31□□□□□ -2.04
SNX41YDR425W ATP6P00854 259 aa2.31□□□□□ -2.04
SNX41YDR425W PAB1P04147 577 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SNX41YDR425W GDH1P07262 454 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W BCY1P07278 416 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W GAL3P13045 520 aa2.31□□□□□ -2.04
SNX41YDR425W APE1P14904 514 aa2.31□□□□□ -2.04
SNX41YDR425W NSP1P14907 823 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W DBP3P20447 523 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W MCK1P21965 375 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W SLY1P22213 666 aa2.31□□□□□ -2.04
SNX41YDR425W HXT2P23585 541 aa2.31□□□□□ -2.04
SNX41YDR425W RVS161P25343 265 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W YCR007CP25354 239 aa2.31□□□□□ -2.04
SNX41YDR425W CHA1P25379 360 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W SGF29P25554 259 aa2.31□□□□□ -2.04
SNX41YDR425W YIH1P25637 258 aa2.31□□□□□ -2.04
SNX41YDR425W NDI1P32340 513 aa2.31□□□□□ -2.04
SNX41YDR425W SSO1P32867 290 aa2.31□□□□□ -2.04
SNX41YDR425W SKG6P32900 734 aaPredicted RBP2.31□□□□□ -2.04
SNX41YDR425W SRB2P34162 210 aa2.31□□□□□ -2.04
SNX41YDR425W YBR144CP34215 104 aa2.31□□□□□ -2.04
SNX41YDR425W CSG2P35206 410 aa2.31□□□□□ -2.04
SNX41YDR425W SKG1P36169 355 aa2.31□□□□□ -2.04
SNX41YDR425W RPL32P38061 130 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W CYC2P38909 366 aa2.31□□□□□ -2.04
SNX41YDR425W FLC2P39719 783 aa2.31□□□□□ -2.04
SNX41YDR425W VPS52P39904 641 aa2.31□□□□□ -2.04
SNX41YDR425W SCC4P40090 624 aa2.31□□□□□ -2.04
SNX41YDR425W UTP18P40362 594 aaPredicted RBP2.31□□□□□ -2.04
SNX41YDR425W ESL1P40456 1118 aa2.31□□□□□ -2.04
SNX41YDR425W YFL012WP43580 148 aa2.31□□□□□ -2.04
SNX41YDR425W PTR3P43606 678 aa2.31□□□□□ -2.04
SNX41YDR425W SNG1P46950 547 aa2.31□□□□□ -2.04
SNX41YDR425W PHO86P46956 311 aa2.31□□□□□ -2.04
SNX41YDR425W AIM23P47015 356 aa2.31□□□□□ -2.04
SNX41YDR425W APS3P47064 194 aa2.31□□□□□ -2.04
SNX41YDR425W HOC1P47124 396 aa2.31□□□□□ -2.04
SNX41YDR425W KEL2P50090 882 aa2.31□□□□□ -2.04
SNX41YDR425W ARO8P53090 500 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W FMP48P53233 369 aa2.31□□□□□ -2.04
SNX41YDR425W RCF2P53721 224 aa2.31□□□□□ -2.04
SNX41YDR425W CUS2P53830 285 aaPredicted RBP2.31□□□□□ -2.04
SNX41YDR425W SLT2Q00772 484 aa2.31□□□□□ -2.04
SNX41YDR425W IRC4Q03036 179 aa2.31□□□□□ -2.04
SNX41YDR425W RRP17Q04031 235 aaPredicted RBP2.31□□□□□ -2.04
SNX41YDR425W HSP31Q04432 237 aa2.31□□□□□ -2.04
SNX41YDR425W COS7Q07788 383 aa2.31□□□□□ -2.04
SNX41YDR425W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SNX41YDR425W CUE5Q08412 411 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W MUM3Q08750 479 aa2.31□□□□□ -2.04
SNX41YDR425W SAM4Q08985 325 aaKnown RBP2.31□□□□□ -2.04
SNX41YDR425W YDL009CQ12210 107 aa2.31□□□□□ -2.04
SNX41YDR425W SNU23Q12368 194 aaPredicted RBP2.31□□□□□ -2.04
SNX41YDR425W AVL9Q12500 764 aa2.31□□□□□ -2.04
SNX41YDR425W SET6Q12529 373 aa2.31□□□□□ -2.04
SNX41YDR425W HSH49Q99181 213 aaPredicted RBP2.31□□□□□ -2.04
SNX41YDR425W RGS2Q99188 309 aa2.31□□□□□ -2.04
SNX41YDR425W IPP1P00817 287 aaKnown RBP2.3□□□□□ -2.04
SNX41YDR425W STE3P06783 470 aa2.3□□□□□ -2.04
SNX41YDR425W UGA1P17649 471 aa2.3□□□□□ -2.04
SNX41YDR425W MET16P18408 261 aaPredicted RBP2.3□□□□□ -2.04
SNX41YDR425W TRX1P22217 103 aaKnown RBP2.3□□□□□ -2.04
SNX41YDR425W YCK1P23291 538 aa2.3□□□□□ -2.04
SNX41YDR425W RPL24BP24000 155 aaKnown RBP2.3□□□□□ -2.04
SNX41YDR425W GIT1P25346 518 aa2.3□□□□□ -2.04
SNX41YDR425W ATP7P30902 174 aa2.3□□□□□ -2.04
SNX41YDR425W AEP1P32493 518 aa2.3□□□□□ -2.04
SNX41YDR425W PRP21P32524 280 aaPredicted RBP2.3□□□□□ -2.04
SNX41YDR425W PTR2P32901 601 aa2.3□□□□□ -2.04
SNX41YDR425W MRPL40P36534 297 aa2.3□□□□□ -2.04
SNX41YDR425W ATG12P38316 186 aa2.3□□□□□ -2.04
SNX41YDR425W STP2P38704 541 aa2.3□□□□□ -2.04
SNX41YDR425W YHR045WP38775 560 aa2.3□□□□□ -2.04
SNX41YDR425W YHK8P38776 514 aa2.3□□□□□ -2.04
SNX41YDR425W IPI1P38803 334 aaPredicted RBP2.3□□□□□ -2.04
SNX41YDR425W NDT80P38830 627 aa2.3□□□□□ -2.04
SNX41YDR425W ATG7P38862 630 aa2.3□□□□□ -2.04
SNX41YDR425W MTW1P39731 289 aa2.3□□□□□ -2.04
SNX41YDR425W THO1P40040 218 aaKnown RBP2.3□□□□□ -2.04
SNX41YDR425W TMA108P40462 946 aa2.3□□□□□ -2.04
SNX41YDR425W YKE4P40544 346 aa2.3□□□□□ -2.04
SNX41YDR425W YJL132WP47014 750 aa2.3□□□□□ -2.04
SNX41YDR425W IRC18P47056 224 aa2.3□□□□□ -2.04
SNX41YDR425W MND1P53102 219 aa2.3□□□□□ -2.04
SNX41YDR425W RPT4P53549 437 aaKnown RBP2.3□□□□□ -2.04
SNX41YDR425W CAF40P53829 373 aa2.3□□□□□ -2.04
SNX41YDR425W FYV6P53913 173 aa2.3□□□□□ -2.04
SNX41YDR425W VPS9P54787 451 aa2.3□□□□□ -2.04
SNX41YDR425W GRX5Q02784 150 aa2.3□□□□□ -2.04
SNX41YDR425W APC4Q04601 652 aa2.3□□□□□ -2.04
SNX41YDR425W VTA1Q06263 330 aa2.3□□□□□ -2.04
SNX41YDR425W YNG1Q08465 219 aa2.3□□□□□ -2.04
SNX41YDR425W KEL3Q08979 651 aaPredicted RBP2.3□□□□□ -2.04
SNX41YDR425W NMD4Q12129 218 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms