RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W ATG12P38316 186 aa3.57□□□□□ -1.84
RRP17YDR412W MSG5P38590 489 aa3.57□□□□□ -1.84
RRP17YDR412W SPT8P38915 602 aa3.57□□□□□ -1.84
RRP17YDR412W FHL1P39521 936 aa3.57□□□□□ -1.84
RRP17YDR412W ERG10P41338 398 aaKnown RBP3.57□□□□□ -1.84
RRP17YDR412W WWM1P43582 211 aaKnown RBP3.57□□□□□ -1.84
RRP17YDR412W AIP1P46680 615 aaKnown RBP3.57□□□□□ -1.84
RRP17YDR412W NCA3P46955 337 aa3.57□□□□□ -1.84
RRP17YDR412W COS5P47187 383 aa3.57□□□□□ -1.84
RRP17YDR412W HST1P53685 503 aa3.57□□□□□ -1.84
RRP17YDR412W YNR068CP53754 272 aa3.57□□□□□ -1.84
RRP17YDR412W PPM1Q04081 328 aa3.57□□□□□ -1.84
RRP17YDR412W TAF9Q05027 157 aa3.57□□□□□ -1.84
RRP17YDR412W PML1Q07930 204 aaPredicted RBP3.57□□□□□ -1.84
RRP17YDR412W VPS54Q12071 889 aa3.57□□□□□ -1.84
RRP17YDR412W RAD3P06839 778 aa3.56□□□□□ -1.84
RRP17YDR412W RPL1AP0CX43 217 aaKnown RBP3.56□□□□□ -1.84
RRP17YDR412W RPL1BP0CX44 217 aaKnown RBP3.56□□□□□ -1.84
RRP17YDR412W NIP100P33420 868 aa3.56□□□□□ -1.84
RRP17YDR412W YET1P35723 206 aa3.56□□□□□ -1.84
RRP17YDR412W YEL075CP39972 122 aa3.56□□□□□ -1.84
RRP17YDR412W OSW5P40219 148 aa3.56□□□□□ -1.84
RRP17YDR412W PRM5P40476 318 aa3.56□□□□□ -1.84
RRP17YDR412W UFE1P41834 346 aa3.56□□□□□ -1.84
RRP17YDR412W CAK1P43568 368 aaPredicted RBP3.56□□□□□ -1.84
RRP17YDR412W VEL1P53058 206 aa3.56□□□□□ -1.84
RRP17YDR412W ERV25P54837 211 aaKnown RBP3.56□□□□□ -1.84
RRP17YDR412W PRO2P54885 456 aaKnown RBP3.56□□□□□ -1.84
RRP17YDR412W SOV1Q04748 898 aa3.56□□□□□ -1.84
RRP17YDR412W RQC1Q05468 723 aaKnown RBP3.56□□□□□ -1.84
RRP17YDR412W SIL1Q08199 421 aa3.56□□□□□ -1.84
RRP17YDR412W YLR108CQ12259 485 aa3.56□□□□□ -1.84
RRP17YDR412W EMP46Q12396 444 aa3.56□□□□□ -1.84
RRP17YDR412W SEC39Q12745 709 aa3.56□□□□□ -1.84
RRP17YDR412W AI5_BETAQ9ZZX0 354 aa3.56□□□□□ -1.84
RRP17YDR412W PAB1P04147 577 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
RRP17YDR412W RPL22AP05749 121 aaKnown RBP3.55□□□□□ -1.84
RRP17YDR412W CDC33P07260 213 aaKnown RBP3.55□□□□□ -1.84
RRP17YDR412W YAR066WP0CX18 203 aa3.55□□□□□ -1.84
RRP17YDR412W YHR214WP0CX19 203 aa3.55□□□□□ -1.84
RRP17YDR412W DAP2P18962 818 aa3.55□□□□□ -1.84
RRP17YDR412W FPR1P20081 114 aaKnown RBP3.55□□□□□ -1.84
RRP17YDR412W YEL043WP32618 956 aa3.55□□□□□ -1.84
RRP17YDR412W SUR1P33300 382 aa3.55□□□□□ -1.84
RRP17YDR412W CMC1P36064 111 aa3.55□□□□□ -1.84
RRP17YDR412W DAD2P36162 133 aa3.55□□□□□ -1.84
RRP17YDR412W OTU2P38747 307 aaKnown RBP3.55□□□□□ -1.84
RRP17YDR412W CCT2P39076 527 aaKnown RBP3.55□□□□□ -1.84
RRP17YDR412W HEM14P40012 539 aa3.55□□□□□ -1.84
RRP17YDR412W HYR1P40581 163 aaKnown RBP3.55□□□□□ -1.84
RRP17YDR412W DLD2P46681 530 aaKnown RBP3.55□□□□□ -1.84
RRP17YDR412W PCP1P53259 346 aa3.55□□□□□ -1.84
RRP17YDR412W YGR111WP53265 400 aa3.55□□□□□ -1.84
RRP17YDR412W TRM112P53738 135 aaPredicted RBP3.55□□□□□ -1.84
RRP17YDR412W IBD2P53892 351 aa3.55□□□□□ -1.84
RRP17YDR412W ALF1P53904 254 aa3.55□□□□□ -1.84
RRP17YDR412W ARO80Q04052 950 aa3.55□□□□□ -1.84
RRP17YDR412W YMR111CQ04461 462 aaPredicted RBP3.55□□□□□ -1.84
RRP17YDR412W DBP9Q06218 594 aaKnown RBP3.55□□□□□ -1.84
RRP17YDR412W MDY2Q12285 212 aa3.55□□□□□ -1.84
RRP17YDR412W RPL3P14126 387 aaKnown RBP3.54□□□□□ -1.84
RRP17YDR412W PHO84P25297 587 aaKnown RBP3.54□□□□□ -1.84
RRP17YDR412W SGE1P33335 543 aa3.54□□□□□ -1.84
RRP17YDR412W YSW1P38280 609 aa3.54□□□□□ -1.84
RRP17YDR412W URA8P38627 578 aaPredicted RBP3.54□□□□□ -1.84
RRP17YDR412W PAN6P40459 309 aa3.54□□□□□ -1.84
RRP17YDR412W HXT14P42833 540 aa3.54□□□□□ -1.84
RRP17YDR412W SHE4P51534 789 aa3.54□□□□□ -1.84
RRP17YDR412W YIP1P53039 248 aa3.54□□□□□ -1.84
RRP17YDR412W TWF1P53250 332 aa3.54□□□□□ -1.84
RRP17YDR412W KAP120Q02932 1032 aa3.54□□□□□ -1.84
RRP17YDR412W HRI1Q05905 244 aaKnown RBP3.54□□□□□ -1.84
RRP17YDR412W DIS3Q08162 1001 aaKnown RBP3.54□□□□□ -1.84
RRP17YDR412W YPR022CQ12139 1133 aa3.54□□□□□ -1.84
RRP17YDR412W BRR1Q99177 341 aaPredicted RBP3.54□□□□□ -1.84
RRP17YDR412W CUP1-1P0CX80 61 aa3.53□□□□□ -1.84
RRP17YDR412W CUP1-2P0CX81 61 aa3.53□□□□□ -1.84
RRP17YDR412W PET123P17558 318 aa3.53□□□□□ -1.84
RRP17YDR412W SNT1P25357 1226 aa3.53□□□□□ -1.84
RRP17YDR412W CRM1P30822 1084 aaKnown RBP3.53□□□□□ -1.84
RRP17YDR412W HXT3P32466 567 aaKnown RBP3.53□□□□□ -1.84
RRP17YDR412W LTV1P34078 463 aa3.53□□□□□ -1.84
RRP17YDR412W PCH2P38126 564 aa3.53□□□□□ -1.84
RRP17YDR412W PCF11P39081 626 aaPredicted RBP3.53□□□□□ -1.84
RRP17YDR412W MST28P39552 234 aa3.53□□□□□ -1.84
RRP17YDR412W URB2P47108 1174 aa3.53□□□□□ -1.84
RRP17YDR412W PRP24P49960 444 aaKnown RBP3.53□□□□□ -1.84
RRP17YDR412W MTM1P53320 366 aa3.53□□□□□ -1.84
RRP17YDR412W TSA2Q04120 196 aa3.53□□□□□ -1.84
RRP17YDR412W RTN1Q04947 295 aaKnown RBP3.53□□□□□ -1.84
RRP17YDR412W DCI1Q08558 271 aa3.53□□□□□ -1.84
RRP17YDR412W APC5Q08683 685 aa3.53□□□□□ -1.84
RRP17YDR412W UAF30Q08747 228 aa3.53□□□□□ -1.84
RRP17YDR412W IRA1P18963 3092 aa3.52□□□□□ -1.85
RRP17YDR412W NIP1P32497 812 aaKnown RBP3.52□□□□□ -1.85
RRP17YDR412W RML2P32611 393 aa3.52□□□□□ -1.85
RRP17YDR412W YME2P32843 850 aa3.52□□□□□ -1.85
RRP17YDR412W SDH3P33421 198 aa3.52□□□□□ -1.85
RRP17YDR412W SRB2P34162 210 aa3.52□□□□□ -1.85
RRP17YDR412W ECM13P38195 257 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms