RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	ABZ2	Q03266	374 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	PEX10	Q05568	337 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	RNH202	Q05635	350 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	NOP12	Q08208	459 aa	Known RBP	5.66	□□□□□ -1.5
RPT3	YDR394W	RTT10	Q08924	1013 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	COX3	P00420	269 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	CMP2	P14747	604 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	FUR1	P18562	216 aa	Known RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	IMG2	P25642	146 aa	Predicted RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	BUB3	P26449	341 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	CMK1	P27466	446 aa	Known RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	NTH1	P32356	751 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	ERG1	P32476	496 aa	Known RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	SFC1	P33303	322 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	DUT1	P33317	147 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	TCD2	P36101	447 aa	Known RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	AIM2	P39721	246 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	MET28	P40573	187 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	IRC7	P43623	340 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	COQ5	P49017	307 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	ARO8	P53090	500 aa	Known RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	ERG26	P53199	349 aa	Known RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	RBG2	P53295	368 aa	Known RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	RHO4	Q00246	291 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	TPS1	Q00764	495 aa	Known RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	MSC1	Q03104	513 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	MAK3	Q03503	176 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	MTQ2	Q03920	221 aa	Predicted RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	YDR514C	Q04408	483 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	RSF1	Q05043	376 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	YPS7	Q06325	596 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	DCI1	Q08558	271 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	SRO7	Q12038	1033 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	ACF2	Q12168	779 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	GPR1	Q12361	961 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	YKL033W-A	Q86ZR7	236 aa		5.65	□□□□□ -1.5
RPT3	YDR394W	PNO1	Q99216	274 aa	Known RBP	5.65	□□□□□ -1.5
RPT3	YDR394W	SIR3	P06701	978 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	YOL163W	P0CF20	169 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	YJU2	P28320	278 aa	Predicted RBP	5.64	□□□□□ -1.51
RPT3	YDR394W	OAR1	P35731	278 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	TUL1	P36096	758 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	RRP3	P38712	501 aa	Known RBP	5.64	□□□□□ -1.51
RPT3	YDR394W	MDM31	P38880	579 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	YJL049W	P47048	450 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	NUP57	P48837	541 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	IMD4	P50094	524 aa	Known RBP	5.64	□□□□□ -1.51
RPT3	YDR394W	CWC23	P52868	283 aa	Predicted RBP	5.64	□□□□□ -1.51
RPT3	YDR394W	MPC1	P53157	130 aa	Known RBP	5.64	□□□□□ -1.51
RPT3	YDR394W	SNO2	P53823	222 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	CSL4	P53859	292 aa	Predicted RBP	5.64	□□□□□ -1.51
RPT3	YDR394W	RHO3	Q00245	231 aa	Known RBP	5.64	□□□□□ -1.51
RPT3	YDR394W	YMR087W	Q04299	284 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	PFA4	Q12006	378 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	THP3	Q12049	470 aa	Known RBP	5.64	□□□□□ -1.51
RPT3	YDR394W	YPR022C	Q12139	1133 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	RKM5	Q12367	367 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	YLR111W	Q12528	110 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	NAG1	Q8TGN9	163 aa		5.64	□□□□□ -1.51
RPT3	YDR394W	HOM2	P13663	365 aa	Known RBP	5.63	□□□□□ -1.51
RPT3	YDR394W	THR1	P17423	357 aa	Known RBP	5.63	□□□□□ -1.51
RPT3	YDR394W	CHA1	P25379	360 aa	Known RBP	5.63	□□□□□ -1.51
RPT3	YDR394W	TAH1	P25638	111 aa	Predicted RBP	5.63	□□□□□ -1.51
RPT3	YDR394W	PTC6	P25646	442 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	SUR1	P33300	382 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	YKL097C	P34245	136 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	YRO2	P38079	344 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	MBA1	P38300	278 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	NVJ1	P38881	321 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	TAT2	P38967	592 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	YAL037W	P39728	267 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	PAC11	P40960	533 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	MKC7	P53379	596 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	YNR061C	P53747	219 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	SNZ1	Q03148	297 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	BOP2	Q06150	570 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	BSC1	Q12140	328 aa		5.63	□□□□□ -1.51
RPT3	YDR394W	ADE5,7	P07244	802 aa	Known RBP	5.62	□□□□□ -1.51
RPT3	YDR394W	CAP2	P13517	287 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	RPB5	P20434	215 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	SBA1	P28707	216 aa	Known RBP	5.62	□□□□□ -1.51
RPT3	YDR394W	ARO7	P32178	256 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	SPT14	P32363	452 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	NDC1	P32500	655 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	YHR035W	P38769	630 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	IPI1	P38803	334 aa	Predicted RBP	5.62	□□□□□ -1.51
RPT3	YDR394W	PLB1	P39105	664 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	ZRG8	P40021	1076 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	VRG4	P40107	337 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	YJL218W	P40892	196 aa	Known RBP	5.62	□□□□□ -1.51
RPT3	YDR394W	YAE1	P47118	141 aa	Predicted RBP	5.62	□□□□□ -1.51
RPT3	YDR394W	RPS12	P48589	143 aa	Known RBP	5.62	□□□□□ -1.51
RPT3	YDR394W	LSG1	P53145	640 aa	Known RBP	5.62	□□□□□ -1.51
RPT3	YDR394W	BUD17	P53727	317 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	MNT4	P53745	580 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	ORM2	Q06144	216 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	VPS36	Q06696	566 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	YEH1	Q07804	573 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	YLR040C	Q07988	224 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	FDH1	Q08911	376 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms