RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W TCD1P38756 429 aa3.91□□□□□ -1.78
SPT3YDR392W CKB2P38930 258 aa3.91□□□□□ -1.78
SPT3YDR392W YER010CP40011 234 aa3.91□□□□□ -1.78
SPT3YDR392W MOB2P43563 287 aa3.91□□□□□ -1.78
SPT3YDR392W SAE2P46946 345 aa3.91□□□□□ -1.78
SPT3YDR392W YDR249CQ03787 373 aa3.91□□□□□ -1.78
SPT3YDR392W ERB1Q04660 807 aaKnown RBP3.91□□□□□ -1.78
SPT3YDR392W TPO3Q06451 622 aa3.91□□□□□ -1.78
SPT3YDR392W ARR1Q06596 294 aa3.91□□□□□ -1.78
SPT3YDR392W YPL150WQ12152 901 aa3.91□□□□□ -1.78
SPT3YDR392W YMR085WP0CF18 432 aa3.9□□□□□ -1.79
SPT3YDR392W ARF1P11076 181 aaKnown RBP3.9□□□□□ -1.79
SPT3YDR392W UTR1P21373 530 aa3.9□□□□□ -1.79
SPT3YDR392W LTV1P34078 463 aa3.9□□□□□ -1.79
SPT3YDR392W YIL024CP40543 189 aa3.9□□□□□ -1.79
SPT3YDR392W GAT4P40569 121 aa3.9□□□□□ -1.79
SPT3YDR392W MAD2P40958 196 aa3.9□□□□□ -1.79
SPT3YDR392W AZF1P41696 914 aa3.9□□□□□ -1.79
SPT3YDR392W MPA43P53583 542 aaPredicted RBP3.9□□□□□ -1.79
SPT3YDR392W PET117Q02771 107 aa3.9□□□□□ -1.79
SPT3YDR392W VPS60Q03390 229 aa3.9□□□□□ -1.79
SPT3YDR392W NRT1Q08485 598 aa3.9□□□□□ -1.79
SPT3YDR392W YPR011CQ12251 326 aa3.9□□□□□ -1.79
SPT3YDR392W FSH3Q99369 266 aa3.9□□□□□ -1.79
SPT3YDR392W RAD10P06838 210 aa3.89□□□□□ -1.79
SPT3YDR392W PEP5P12868 1029 aa3.89□□□□□ -1.79
SPT3YDR392W MDH2P22133 377 aa3.89□□□□□ -1.79
SPT3YDR392W SPS22P25380 463 aa3.89□□□□□ -1.79
SPT3YDR392W SEC65P29478 273 aa3.89□□□□□ -1.79
SPT3YDR392W MF(ALPHA)2P32435 120 aa3.89□□□□□ -1.79
SPT3YDR392W HSP150P32478 413 aa3.89□□□□□ -1.79
SPT3YDR392W GZF3P42944 551 aaKnown RBP3.89□□□□□ -1.79
SPT3YDR392W IRC7P43623 340 aa3.89□□□□□ -1.79
SPT3YDR392W SHE4P51534 789 aa3.89□□□□□ -1.79
SPT3YDR392W MDM34P53083 459 aa3.89□□□□□ -1.79
SPT3YDR392W APJ1P53940 528 aa3.89□□□□□ -1.79
SPT3YDR392W YNL058CP53947 316 aa3.89□□□□□ -1.79
SPT3YDR392W ERV41Q04651 352 aa3.89□□□□□ -1.79
SPT3YDR392W YLR281CQ05863 155 aa3.89□□□□□ -1.79
SPT3YDR392W VAC14Q06708 880 aa3.89□□□□□ -1.79
SPT3YDR392W COS7Q07788 383 aa3.89□□□□□ -1.79
SPT3YDR392W CRT10Q08226 957 aa3.89□□□□□ -1.79
SPT3YDR392W PST1Q12355 444 aa3.89□□□□□ -1.79
SPT3YDR392W AAC1P04710 309 aa3.88□□□□□ -1.79
SPT3YDR392W RPS21AP0C0V8 87 aaKnown RBP3.88□□□□□ -1.79
SPT3YDR392W RPL35AP0CX84 120 aaKnown RBP3.88□□□□□ -1.79
SPT3YDR392W RPL35BP0CX85 120 aaKnown RBP3.88□□□□□ -1.79
SPT3YDR392W SPB1P25582 841 aaPredicted RBP3.88□□□□□ -1.79
SPT3YDR392W DBF4P32325 704 aa3.88□□□□□ -1.79
SPT3YDR392W HEK2P38199 381 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SPT3YDR392W RCK1P38622 512 aa3.88□□□□□ -1.79
SPT3YDR392W ECM34P38728 170 aa3.88□□□□□ -1.79
SPT3YDR392W RFC4P40339 323 aaKnown RBP3.88□□□□□ -1.79
SPT3YDR392W BOP3P53958 396 aa3.88□□□□□ -1.79
SPT3YDR392W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SPT3YDR392W YPL071CQ02864 156 aa3.88□□□□□ -1.79
SPT3YDR392W TRS31Q03337 283 aa3.88□□□□□ -1.79
SPT3YDR392W GMC1Q04399 608 aa3.88□□□□□ -1.79
SPT3YDR392W MUM3Q08750 479 aa3.88□□□□□ -1.79
SPT3YDR392W LSP1Q12230 341 aaKnown RBP3.88□□□□□ -1.79
SPT3YDR392W APA2P22108 325 aa3.87□□□□□ -1.79
SPT3YDR392W NDI1P32340 513 aa3.87□□□□□ -1.79
SPT3YDR392W VPS51P36116 164 aa3.87□□□□□ -1.79
SPT3YDR392W EFM2P38347 419 aa3.87□□□□□ -1.79
SPT3YDR392W GLR1P41921 483 aaKnown RBP3.87□□□□□ -1.79
SPT3YDR392W MDE1P47095 244 aa3.87□□□□□ -1.79
SPT3YDR392W SIP18P50263 79 aa3.87□□□□□ -1.79
SPT3YDR392W YOR365CQ08844 703 aa3.87□□□□□ -1.79
SPT3YDR392W ERP4Q12450 207 aa3.87□□□□□ -1.79
SPT3YDR392W SET6Q12529 373 aa3.87□□□□□ -1.79
SPT3YDR392W RSR1P13856 272 aa3.86□□□□□ -1.79
SPT3YDR392W UGA1P17649 471 aa3.86□□□□□ -1.79
SPT3YDR392W PTR2P32901 601 aa3.86□□□□□ -1.79
SPT3YDR392W MAL33P38157 468 aa3.86□□□□□ -1.79
SPT3YDR392W YBR138CP38277 524 aa3.86□□□□□ -1.79
SPT3YDR392W YJL193WP39542 402 aa3.86□□□□□ -1.79
SPT3YDR392W ECM10P39987 644 aa3.86□□□□□ -1.79
SPT3YDR392W SHO1P40073 367 aa3.86□□□□□ -1.79
SPT3YDR392W YJR096WP47137 282 aa3.86□□□□□ -1.79
SPT3YDR392W MRPL19P53875 158 aa3.86□□□□□ -1.79
SPT3YDR392W YNL046WP53956 172 aa3.86□□□□□ -1.79
SPT3YDR392W GTR1Q00582 310 aa3.86□□□□□ -1.79
SPT3YDR392W YDR222WQ04925 415 aa3.86□□□□□ -1.79
SPT3YDR392W BUR2Q05949 395 aa3.86□□□□□ -1.79
SPT3YDR392W YPR172WQ06608 200 aa3.86□□□□□ -1.79
SPT3YDR392W PRP11Q07350 266 aaPredicted RBP3.86□□□□□ -1.79
SPT3YDR392W FMP40Q08968 688 aaPredicted RBP3.86□□□□□ -1.79
SPT3YDR392W AHA1Q12449 350 aaKnown RBP3.86□□□□□ -1.79
SPT3YDR392W RPS21BQ3E754 87 aaKnown RBP3.86□□□□□ -1.79
SPT3YDR392W ARD1P07347 238 aaPredicted RBP3.85□□□□□ -1.79
SPT3YDR392W RPS23AP0CX29 145 aaKnown RBP3.85□□□□□ -1.79
SPT3YDR392W RPS23BP0CX30 145 aa3.85□□□□□ -1.79
SPT3YDR392W URA7P28274 579 aaKnown RBP3.85□□□□□ -1.79
SPT3YDR392W ECM25P32525 599 aa3.85□□□□□ -1.79
SPT3YDR392W MFT1P33441 392 aaKnown RBP3.85□□□□□ -1.79
SPT3YDR392W HES1P35843 434 aa3.85□□□□□ -1.79
SPT3YDR392W RCK2P38623 610 aa3.85□□□□□ -1.79
SPT3YDR392W TRR2P38816 342 aa3.85□□□□□ -1.79
SPT3YDR392W PHO90P39535 881 aa3.85□□□□□ -1.79
SPT3YDR392W MEP1P40260 492 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms