RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	YDR222W	Q04925	415 aa		4.25	□□□□□ -1.73
SPR28	YDR218C	DCR2	Q05924	578 aa		4.25	□□□□□ -1.73
SPR28	YDR218C	ATG17	Q06410	417 aa		4.25	□□□□□ -1.73
SPR28	YDR218C	CDD1	Q06549	142 aa		4.25	□□□□□ -1.73
SPR28	YDR218C	ASA1	Q06822	443 aa		4.25	□□□□□ -1.73
SPR28	YDR218C	YOR365C	Q08844	703 aa		4.25	□□□□□ -1.73
SPR28	YDR218C	PER33	Q12144	273 aa		4.25	□□□□□ -1.73
SPR28	YDR218C	NCE102	Q12207	173 aa	RIP-Chip data	4.25	□□□□□ -1.73	not detected
SPR28	YDR218C	ATG34	Q12292	412 aa		4.25	□□□□□ -1.73
SPR28	YDR218C	ILV1	P00927	576 aa	Known RBP	4.24	□□□□□ -1.73
SPR28	YDR218C	YPT1	P01123	206 aa	Known RBP	4.24	□□□□□ -1.73
SPR28	YDR218C	HTB1	P02293	131 aa	Known RBP	4.24	□□□□□ -1.73
SPR28	YDR218C	HTB2	P02294	131 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	TPK3	P05986	398 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	RAD52	P06778	471 aa	Known RBP	4.24	□□□□□ -1.73
SPR28	YDR218C	YBR121C-A	P0C5L4	52 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	IMA3	P0CW40	589 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	IMA4	P0CW41	589 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	SNF3	P10870	884 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	RPS5	P26783	225 aa	Known RBP	4.24	□□□□□ -1.73
SPR28	YDR218C	ITR2	P30606	609 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	YKL162C	P36052	402 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	YPK3	P38070	525 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	YMC2	P38087	329 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	ARP1	P38696	384 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	SHO1	P40073	367 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	COA1	P40452	197 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	AGP3	P43548	558 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	TRS85	P46944	698 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	IBA57	P47158	497 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	PYK2	P52489	506 aa	Known RBP	4.24	□□□□□ -1.73
SPR28	YDR218C	TAF6	P53040	516 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	SLX9	P53251	210 aa	Predicted RBP	4.24	□□□□□ -1.73
SPR28	YDR218C	EBS1	Q03466	884 aa	Known RBP	4.24	□□□□□ -1.73
SPR28	YDR218C	NAT4	Q04751	285 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	IVY1	Q04934	453 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	PBP4	Q07362	185 aa	Known RBP	4.24	□□□□□ -1.73
SPR28	YDR218C	IMA2	Q08295	589 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	ABP140	Q08641	628 aa	Known RBP	4.24	□□□□□ -1.73
SPR28	YDR218C	YPR022C	Q12139	1133 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	Q0010	Q9ZZX9	128 aa		4.24	□□□□□ -1.73
SPR28	YDR218C	CHO1	P08456	276 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	POX1	P13711	748 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	SPO12	P17123	173 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	ARF2	P19146	181 aa	Known RBP	4.23	□□□□□ -1.73
SPR28	YDR218C	RPB8	P20436	146 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	CLB2	P24869	491 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	YCR006C	P25350	157 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	PEX3	P28795	441 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	ZUO1	P32527	433 aa	Known RBP	4.23	□□□□□ -1.73
SPR28	YDR218C	YNK1	P36010	153 aa	Known RBP	4.23	□□□□□ -1.73
SPR28	YDR218C	YAL037W	P39728	267 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	ERG28	P40030	148 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	TMA22	P47089	198 aa	Predicted RBP	4.23	□□□□□ -1.73
SPR28	YDR218C	HMS2	P47175	358 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	YJR154W	P47181	346 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	UBP8	P50102	471 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	YGL159W	P53110	370 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	SED5	Q01590	340 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	SPC2	Q04969	178 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	HRD3	Q05787	833 aa		4.23	□□□□□ -1.73
SPR28	YDR218C	PPZ1	P26570	692 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	NUP2	P32499	720 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	SPS19	P32573	292 aa	Known RBP	4.22	□□□□□ -1.73
SPR28	YDR218C	IES6	P32617	166 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	UBC6	P33296	250 aa	Predicted RBP	4.22	□□□□□ -1.73
SPR28	YDR218C	MRPS5	P33759	307 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	RIM2	P38127	377 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	FZO1	P38297	855 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	LAG1	P38703	411 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	TAD2	P47058	250 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	LYS20	P48570	428 aa	Known RBP	4.22	□□□□□ -1.73
SPR28	YDR218C	AZR1	P50080	613 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	PMT5	P52867	743 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	MIG2	P53035	382 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	PKP2	P53170	491 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	BIO4	P53630	237 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	ZRG17	P53735	605 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	TRM112	P53738	135 aa	Predicted RBP	4.22	□□□□□ -1.73
SPR28	YDR218C	SAM50	P53969	484 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	HER2	Q03557	464 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	OST6	Q03723	332 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	SNA4	Q07549	140 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	TLG2	Q08144	397 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	TIP41	Q12199	356 aa		4.22	□□□□□ -1.73
SPR28	YDR218C	BI2	P03873	423 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	ATP1	P07251	545 aa	Known RBP	4.21	□□□□□ -1.74
SPR28	YDR218C	BAR1	P12630	587 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	YMR31	P19955	123 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	NUP1	P20676	1076 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	ADE1	P27616	306 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	YMC1	P32331	307 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	PDR3	P33200	976 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	ATG7	P38862	630 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	DDI1	P40087	428 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	YIA6	P40556	373 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	NAS6	P50086	228 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	PCP1	P53259	346 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	BUD32	P53323	261 aa		4.21	□□□□□ -1.74
SPR28	YDR218C	PXR1	P53335	271 aa	Predicted RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms