RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C GVP36P40531 326 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C ELP2P42935 788 aa0.75□□□□□ -2.29
SEC1YDR164C SNZ3P43545 298 aa0.75□□□□□ -2.29
SEC1YDR164C FET5P43561 622 aa0.75□□□□□ -2.29
SEC1YDR164C PTR3P43606 678 aa0.75□□□□□ -2.29
SEC1YDR164C BNA6P43619 295 aa0.75□□□□□ -2.29
SEC1YDR164C PHO86P46956 311 aa0.75□□□□□ -2.29
SEC1YDR164C TMA22P47089 198 aaPredicted RBP0.75□□□□□ -2.29
SEC1YDR164C LIA1P47120 325 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C ECM27P47144 725 aa0.75□□□□□ -2.29
SEC1YDR164C SHE4P51534 789 aa0.75□□□□□ -2.29
SEC1YDR164C PYK2P52489 506 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C MND1P53102 219 aa0.75□□□□□ -2.29
SEC1YDR164C LSG1P53145 640 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C ERG26P53199 349 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C SNZ2P53824 298 aa0.75□□□□□ -2.29
SEC1YDR164C CUS2P53830 285 aaPredicted RBP0.75□□□□□ -2.29
SEC1YDR164C COG5P53951 403 aa0.75□□□□□ -2.29
SEC1YDR164C ASI1P54074 624 aa0.75□□□□□ -2.29
SEC1YDR164C PRO2P54885 456 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C LSM3P57743 89 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C RSM23Q01163 450 aa0.75□□□□□ -2.29
SEC1YDR164C OSH6Q02201 448 aa0.75□□□□□ -2.29
SEC1YDR164C RMI1Q02685 241 aa0.75□□□□□ -2.29
SEC1YDR164C RPM2Q02773 1202 aa0.75□□□□□ -2.29
SEC1YDR164C SHR3Q02774 210 aa0.75□□□□□ -2.29
SEC1YDR164C SNZ1Q03148 297 aa0.75□□□□□ -2.29
SEC1YDR164C PFA5Q03289 374 aa0.75□□□□□ -2.29
SEC1YDR164C MZM1Q03429 123 aaPredicted RBP0.75□□□□□ -2.29
SEC1YDR164C EMI2Q04409 500 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C SPC2Q04969 178 aa0.75□□□□□ -2.29
SEC1YDR164C YMR226CQ05016 267 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C YHC1Q05900 231 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C SEC10Q06245 871 aa0.75□□□□□ -2.29
SEC1YDR164C VTA1Q06263 330 aa0.75□□□□□ -2.29
SEC1YDR164C SWC7Q06707 132 aa0.75□□□□□ -2.29
SEC1YDR164C YLL032CQ07834 825 aaKnown RBP RIP-Chip data0.75□□□□□ -2.29not detected
SEC1YDR164C NSE1Q07913 336 aa0.75□□□□□ -2.29
SEC1YDR164C UAF30Q08747 228 aa0.75□□□□□ -2.29
SEC1YDR164C TAF10Q12030 206 aa0.75□□□□□ -2.29
SEC1YDR164C PKH2Q12236 1081 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C MDY2Q12285 212 aa0.75□□□□□ -2.29
SEC1YDR164C GLE1Q12315 538 aa0.75□□□□□ -2.29
SEC1YDR164C YRM1Q12340 786 aa0.75□□□□□ -2.29
SEC1YDR164C TRM10Q12400 293 aa0.75□□□□□ -2.29
SEC1YDR164C OCA6Q12454 224 aa0.75□□□□□ -2.29
SEC1YDR164C SKS1Q12505 502 aa0.75□□□□□ -2.29
SEC1YDR164C YPL247CQ12523 523 aa0.75□□□□□ -2.29
SEC1YDR164C YMR030W-AQ3E760 96 aa0.75□□□□□ -2.29
SEC1YDR164C RGS2Q99188 309 aa0.75□□□□□ -2.29
SEC1YDR164C AI5_BETAQ9ZZX0 354 aa0.75□□□□□ -2.29
SEC1YDR164C TUS1Q06412 1307 aa0.75□□□□□ -2.29
SEC1YDR164C RRP5Q05022 1729 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C DNF3Q12674 1656 aa0.75□□□□□ -2.29
SEC1YDR164C SUC2P00724 532 aa0.74□□□□□ -2.29
SEC1YDR164C RAS2P01120 322 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C COX4P04037 155 aa0.74□□□□□ -2.29
SEC1YDR164C RPL22AP05749 121 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C CDC21P06785 304 aa0.74□□□□□ -2.29
SEC1YDR164C MET2P08465 486 aa0.74□□□□□ -2.29
SEC1YDR164C RPL1AP0CX43 217 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C RPL1BP0CX44 217 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C GPA2P10823 449 aa0.74□□□□□ -2.29
SEC1YDR164C TCP1P12612 559 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C POX1P13711 748 aa0.74□□□□□ -2.29
SEC1YDR164C NMT1P14743 455 aa0.74□□□□□ -2.29
SEC1YDR164C MTF1P14908 341 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C DAP2P18962 818 aa0.74□□□□□ -2.29
SEC1YDR164C CDC42P19073 191 aa0.74□□□□□ -2.29
SEC1YDR164C URA4P20051 364 aa0.74□□□□□ -2.29
SEC1YDR164C RPB4P20433 221 aaPredicted RBP0.74□□□□□ -2.29
SEC1YDR164C CLN1P20437 546 aa0.74□□□□□ -2.29
SEC1YDR164C RPL24BP24000 155 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C DPB2P24482 689 aaPredicted RBP0.74□□□□□ -2.29
SEC1YDR164C RVS161P25343 265 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C PEX3P28795 441 aa0.74□□□□□ -2.29
SEC1YDR164C ARO7P32178 256 aa0.74□□□□□ -2.29
SEC1YDR164C ATP11P32453 318 aa0.74□□□□□ -2.29
SEC1YDR164C NUP2P32499 720 aa0.74□□□□□ -2.29
SEC1YDR164C PRP18P33411 251 aaPredicted RBP0.74□□□□□ -2.29
SEC1YDR164C HCS1P34243 683 aa0.74□□□□□ -2.29
SEC1YDR164C AST1P35183 429 aa0.74□□□□□ -2.29
SEC1YDR164C MIA40P36046 403 aa0.74□□□□□ -2.29
SEC1YDR164C SPC34P36131 295 aa0.74□□□□□ -2.29
SEC1YDR164C YBR032WP38223 100 aa0.74□□□□□ -2.29
SEC1YDR164C RCK2P38623 610 aa0.74□□□□□ -2.29
SEC1YDR164C LEU5P38702 357 aa0.74□□□□□ -2.29
SEC1YDR164C DBP8P38719 431 aa0.74□□□□□ -2.29
SEC1YDR164C YHI9P38765 294 aa0.74□□□□□ -2.29
SEC1YDR164C VMA22P38784 181 aa0.74□□□□□ -2.29
SEC1YDR164C UBA4P38820 440 aa0.74□□□□□ -2.29
SEC1YDR164C FHL1P39521 936 aa0.74□□□□□ -2.29
SEC1YDR164C MBB1P39534 108 aa0.74□□□□□ -2.29
SEC1YDR164C HAT2P39984 401 aa0.74□□□□□ -2.29
SEC1YDR164C RGI1P40043 161 aaPredicted RBP0.74□□□□□ -2.29
SEC1YDR164C ALD5P40047 520 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C ALG8P40351 577 aa0.74□□□□□ -2.29
SEC1YDR164C YIL060WP40519 144 aa0.74□□□□□ -2.29
SEC1YDR164C NAS2P40555 220 aa0.74□□□□□ -2.29
SEC1YDR164C HXT9P40885 567 aa0.74□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms