RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeastyeast

Gene RRP1, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP1YDR087C CDC50P25656 391 aa4.49□□□□□ -1.69
RRP1YDR087C SMI1P32566 505 aa4.49□□□□□ -1.69
RRP1YDR087C TIM17P39515 158 aa4.49□□□□□ -1.69
RRP1YDR087C SEC9P40357 651 aa4.49□□□□□ -1.69
RRP1YDR087C ECM5Q03214 1411 aa4.48□□□□□ -1.69
RRP1YDR087C SOD1P00445 154 aaKnown RBP4.48□□□□□ -1.69
RRP1YDR087C UTH1P36135 365 aa4.48□□□□□ -1.69
RRP1YDR087C ATG7P38862 630 aa4.48□□□□□ -1.69
RRP1YDR087C ALD5P40047 520 aaKnown RBP4.48□□□□□ -1.69
RRP1YDR087C DFG10P40526 253 aa4.48□□□□□ -1.69
RRP1YDR087C PGU1P47180 361 aa4.48□□□□□ -1.69
RRP1YDR087C HAL1Q01766 294 aa4.48□□□□□ -1.69
RRP1YDR087C SMP3Q04174 516 aa4.48□□□□□ -1.69
RRP1YDR087C LIP2Q06005 328 aa4.48□□□□□ -1.69
RRP1YDR087C PRB1P09232 635 aa4.47□□□□□ -1.69
RRP1YDR087C HSP26P15992 214 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
RRP1YDR087C ANP1P32629 500 aa4.47□□□□□ -1.69
RRP1YDR087C LSM12P38828 187 aaKnown RBP4.47□□□□□ -1.69
RRP1YDR087C PFS1P38872 237 aa4.47□□□□□ -1.69
RRP1YDR087C TRF5P48561 642 aaKnown RBP4.47□□□□□ -1.69
RRP1YDR087C YMR310CQ04867 317 aaPredicted RBP4.47□□□□□ -1.69
RRP1YDR087C HMX1P32339 317 aa4.46□□□□□ -1.7
RRP1YDR087C MRPS5P33759 307 aa4.46□□□□□ -1.7
RRP1YDR087C SHE4P51534 789 aa4.46□□□□□ -1.7
RRP1YDR087C VAC7P53950 1165 aa4.46□□□□□ -1.7
RRP1YDR087C HEM4P06174 275 aa4.45□□□□□ -1.7
RRP1YDR087C ZRC1P20107 442 aa4.45□□□□□ -1.7
RRP1YDR087C GIT1P25346 518 aa4.45□□□□□ -1.7
RRP1YDR087C YHC3P47040 408 aa4.45□□□□□ -1.7
RRP1YDR087C ATP22P50273 684 aaPredicted RBP4.45□□□□□ -1.7
RRP1YDR087C SEH1P53011 349 aaKnown RBP4.45□□□□□ -1.7
RRP1YDR087C PRM1P53835 661 aa4.45□□□□□ -1.7
RRP1YDR087C MSC3Q05812 728 aa4.45□□□□□ -1.7
RRP1YDR087C YOL075CQ08234 1294 aa4.45□□□□□ -1.7
RRP1YDR087C SLM3Q12093 417 aa4.45□□□□□ -1.7
RRP1YDR087C YDL109CQ12103 647 aa4.45□□□□□ -1.7
RRP1YDR087C REV3P14284 1504 aa4.45□□□□□ -1.7
RRP1YDR087C HXT2P23585 541 aa4.44□□□□□ -1.7
RRP1YDR087C MXR2P25566 168 aa4.44□□□□□ -1.7
RRP1YDR087C RPL16AP26784 199 aaKnown RBP4.44□□□□□ -1.7
RRP1YDR087C AIP1P46680 615 aaKnown RBP4.44□□□□□ -1.7
RRP1YDR087C LST7P53237 242 aa4.44□□□□□ -1.7
RRP1YDR087C SFM1Q12314 213 aa4.44□□□□□ -1.7
RRP1YDR087C RPL23AP0CX41 137 aaKnown RBP4.43□□□□□ -1.7
RRP1YDR087C RPL23BP0CX42 137 aaKnown RBP4.43□□□□□ -1.7
RRP1YDR087C KRR1P25586 316 aaPredicted RBP4.43□□□□□ -1.7
RRP1YDR087C PRS1P32895 427 aaKnown RBP4.43□□□□□ -1.7
RRP1YDR087C IST2P38250 946 aa4.43□□□□□ -1.7
RRP1YDR087C YIL089WP40500 205 aa4.43□□□□□ -1.7
RRP1YDR087C PRP38Q00723 242 aaPredicted RBP4.43□□□□□ -1.7
RRP1YDR087C RRB1Q04225 511 aaKnown RBP4.43□□□□□ -1.7
RRP1YDR087C NAT4Q04751 285 aa4.43□□□□□ -1.7
RRP1YDR087C DNL4Q08387 944 aaPredicted RBP4.43□□□□□ -1.7
RRP1YDR087C ATP16Q12165 160 aa4.43□□□□□ -1.7
RRP1YDR087C COX4P04037 155 aa4.42□□□□□ -1.7
RRP1YDR087C UTR1P21373 530 aa4.42□□□□□ -1.7
RRP1YDR087C DEP1P31385 405 aa4.42□□□□□ -1.7
RRP1YDR087C LIN1P38852 340 aaPredicted RBP4.42□□□□□ -1.7
RRP1YDR087C YHR182WP38870 785 aa4.42□□□□□ -1.7
RRP1YDR087C ALP1P38971 573 aa4.42□□□□□ -1.7
RRP1YDR087C YCH1P42937 148 aa4.42□□□□□ -1.7
RRP1YDR087C ENT5Q03769 411 aaKnown RBP4.42□□□□□ -1.7
RRP1YDR087C VMA2P16140 517 aaKnown RBP4.41□□□□□ -1.7
RRP1YDR087C PMT2P31382 759 aa4.41□□□□□ -1.7
RRP1YDR087C YKR015CP36111 568 aa4.41□□□□□ -1.7
RRP1YDR087C YPT35P38815 214 aaKnown RBP4.41□□□□□ -1.7
RRP1YDR087C IGD1P43598 195 aa4.41□□□□□ -1.7
RRP1YDR087C YJR030CP47101 745 aa4.41□□□□□ -1.7
RRP1YDR087C HST1P53685 503 aa4.41□□□□□ -1.7
RRP1YDR087C ARR1Q06596 294 aa4.41□□□□□ -1.7
RRP1YDR087C YOR376WQ08900 122 aa4.41□□□□□ -1.7
RRP1YDR087C RAD1P06777 1100 aa4.4□□□□□ -1.71
RRP1YDR087C IES6P32617 166 aa4.4□□□□□ -1.71
RRP1YDR087C PEX32P38292 413 aa4.4□□□□□ -1.71
RRP1YDR087C YMR134WP40207 237 aa4.4□□□□□ -1.71
RRP1YDR087C PRO2P54885 456 aaKnown RBP4.4□□□□□ -1.71
RRP1YDR087C MRPS16Q02608 121 aa4.4□□□□□ -1.71
RRP1YDR087C CSM3Q04659 317 aa4.4□□□□□ -1.71
RRP1YDR087C YLR177WQ06251 628 aa4.4□□□□□ -1.71
RRP1YDR087C APC5Q08683 685 aa4.4□□□□□ -1.71
RRP1YDR087C GLE1Q12315 538 aa4.4□□□□□ -1.71
RRP1YDR087C UBA3Q99344 299 aa4.4□□□□□ -1.71
RRP1YDR087C RPS14AP06367 137 aaKnown RBP4.39□□□□□ -1.71
RRP1YDR087C CMK2P22517 447 aa4.39□□□□□ -1.71
RRP1YDR087C MKK1P32490 508 aa4.39□□□□□ -1.71
RRP1YDR087C RPS14BP39516 138 aaKnown RBP4.39□□□□□ -1.71
RRP1YDR087C VHT1P53241 593 aa4.39□□□□□ -1.71
RRP1YDR087C TRM82Q03774 444 aa4.39□□□□□ -1.71
RRP1YDR087C FSH2Q05015 223 aa4.39□□□□□ -1.71
RRP1YDR087C FRE8Q12209 686 aa4.39□□□□□ -1.71
RRP1YDR087C SPO24Q3E752 67 aa4.39□□□□□ -1.71
RRP1YDR087C MDS3P53094 1487 aa4.38□□□□□ -1.71
RRP1YDR087C STE7P06784 515 aa4.38□□□□□ -1.71
RRP1YDR087C UNG1P12887 359 aa4.38□□□□□ -1.71
RRP1YDR087C ARF2P19146 181 aaKnown RBP4.38□□□□□ -1.71
RRP1YDR087C TRX1P22217 103 aaKnown RBP4.38□□□□□ -1.71
RRP1YDR087C MIR1P23641 311 aaKnown RBP4.38□□□□□ -1.71
RRP1YDR087C TOA1P32773 286 aa4.38□□□□□ -1.71
RRP1YDR087C MRPL27P36526 146 aaPredicted RBP4.38□□□□□ -1.71
RRP1YDR087C RCK2P38623 610 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms