RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTP1	YDL230W	SPT14	P32363	452 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	CDC12	P32468	407 aa	Known RBP	11.44	□□□□□ -0.58
PTP1	YDL230W	SRB5	P32585	307 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	PTR2	P32901	601 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	MSN2	P33748	704 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	SHE1	P38200	338 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	RPS20	P38701	121 aa	Known RBP	11.44	□□□□□ -0.58
PTP1	YDL230W	YEL068C	P39977	110 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	FMC1	P40491	155 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	SWS2	P53937	143 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	CRT10	Q08226	957 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	YLR125W	Q12138	136 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	RKM5	Q12367	367 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	LAG2	Q92325	660 aa		11.44	□□□□□ -0.58
PTP1	YDL230W	PHO4	P07270	312 aa	Known RBP	11.43	□□□□□ -0.58
PTP1	YDL230W	APN1	P22936	367 aa		11.43	□□□□□ -0.58
PTP1	YDL230W	PTP1	P25044	335 aa		11.43	□□□□□ -0.58
PTP1	YDL230W	ORC2	P32833	620 aa		11.43	□□□□□ -0.58
PTP1	YDL230W	SNU114	P36048	1008 aa	Known RBP	11.43	□□□□□ -0.58
PTP1	YDL230W	BOL3	P39724	118 aa		11.43	□□□□□ -0.58
PTP1	YDL230W	GIP2	P40036	548 aa		11.43	□□□□□ -0.58
PTP1	YDL230W	YAE1	P47118	141 aa	Predicted RBP	11.43	□□□□□ -0.58
PTP1	YDL230W	RIM21	P48565	533 aa		11.43	□□□□□ -0.58
PTP1	YDL230W	EGD1	Q02642	157 aa	Known RBP	11.43	□□□□□ -0.58
PTP1	YDL230W	INP1	Q03694	420 aa		11.43	□□□□□ -0.58
PTP1	YDL230W	YLR346C	Q06139	101 aa		11.43	□□□□□ -0.58
PTP1	YDL230W	ARV1	Q06541	321 aa		11.43	□□□□□ -0.58
PTP1	YDL230W	YEL009C-A	A0A023PZF2	135 aa		11.42	□□□□□ -0.58
PTP1	YDL230W	HOM2	P13663	365 aa	Known RBP	11.42	□□□□□ -0.58
PTP1	YDL230W	MCK1	P21965	375 aa	Known RBP	11.42	□□□□□ -0.58
PTP1	YDL230W	TOD6	P34219	525 aa		11.42	□□□□□ -0.58
PTP1	YDL230W	RSM22	P36056	628 aa		11.42	□□□□□ -0.58
PTP1	YDL230W	AAD10	P47182	288 aa		11.42	□□□□□ -0.58
PTP1	YDL230W	YAT1	P80235	687 aa		11.42	□□□□□ -0.58
PTP1	YDL230W	YVH1	Q02256	364 aa	Known RBP	11.42	□□□□□ -0.58
PTP1	YDL230W	YDL211C	Q12121	372 aa		11.42	□□□□□ -0.58
PTP1	YDL230W	LEU9	Q12166	604 aa	Known RBP	11.42	□□□□□ -0.58
PTP1	YDL230W	TPO4	Q12256	659 aa		11.42	□□□□□ -0.58
PTP1	YDL230W	AAC3	P18238	307 aa		11.41	□□□□□ -0.58
PTP1	YDL230W	YMC1	P32331	307 aa		11.41	□□□□□ -0.58
PTP1	YDL230W	FMP52	P40008	231 aa		11.41	□□□□□ -0.58
PTP1	YDL230W	PGA1	P53896	198 aa		11.41	□□□□□ -0.58
PTP1	YDL230W	NIS1	P53939	407 aa		11.41	□□□□□ -0.58
PTP1	YDL230W	NOP12	Q08208	459 aa	Known RBP	11.41	□□□□□ -0.58
PTP1	YDL230W	YOR238W	Q08634	303 aa		11.41	□□□□□ -0.58
PTP1	YDL230W	RRG7	Q08774	242 aa	Predicted RBP	11.41	□□□□□ -0.58
PTP1	YDL230W	YDR262W	Q12331	272 aa		11.41	□□□□□ -0.58
PTP1	YDL230W	NAR1	P23503	491 aa	Known RBP	11.4	□□□□□ -0.58
PTP1	YDL230W	SUR1	P33300	382 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	CHL4	P38907	458 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	ALP1	P38971	573 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	PAM16	P42949	149 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	IBA57	P47158	497 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	ORM2	Q06144	216 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	THI73	Q07904	523 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	IRC13	Q08630	104 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	YDR061W	Q12298	539 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	GLO4	Q12320	285 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	PCL9	Q12477	304 aa		11.4	□□□□□ -0.58
PTP1	YDL230W	BEM2	P39960	2167 aa	Known RBP	11.4	□□□□□ -0.59
PTP1	YDL230W	CAP2	P13517	287 aa		11.39	□□□□□ -0.59
PTP1	YDL230W	GDS1	P41913	522 aa		11.39	□□□□□ -0.59
PTP1	YDL230W	PFS2	P42841	465 aa	Known RBP	11.39	□□□□□ -0.59
PTP1	YDL230W	DIE2	P50076	525 aa		11.39	□□□□□ -0.59
PTP1	YDL230W	ARO8	P53090	500 aa	Known RBP	11.39	□□□□□ -0.59
PTP1	YDL230W	TPC1	P53257	314 aa		11.39	□□□□□ -0.59
PTP1	YDL230W	PLM2	Q04383	521 aa		11.39	□□□□□ -0.59
PTP1	YDL230W	YPQ2	Q06328	317 aa		11.39	□□□□□ -0.59
PTP1	YDL230W	SUS1	Q6WNK7	96 aa		11.39	□□□□□ -0.59
PTP1	YDL230W	YBR137W	P38276	179 aa		11.38	□□□□□ -0.59
PTP1	YDL230W	VMA22	P38784	181 aa		11.38	□□□□□ -0.59
PTP1	YDL230W	ANS1	P38832	159 aa		11.38	□□□□□ -0.59
PTP1	YDL230W	FMO1	P38866	432 aa		11.38	□□□□□ -0.59
PTP1	YDL230W	SPT20	P50875	604 aa		11.38	□□□□□ -0.59
PTP1	YDL230W	IMO32	P53219	342 aa		11.38	□□□□□ -0.59
PTP1	YDL230W	PFA5	Q03289	374 aa		11.38	□□□□□ -0.59
PTP1	YDL230W	GAL4	P04386	881 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	SIR2	P06700	562 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	HOP1	P20050	605 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	YOR062C	P36025	268 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	MBA1	P38300	278 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	TRR2	P38816	342 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	YIL165C	P40446	119 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	BUD9	P53226	547 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	RRN9	P53437	365 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	SUN4	P53616	420 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	MNT4	P53745	580 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	YDR514C	Q04408	483 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	TSR2	Q06672	205 aa	Known RBP	11.37	□□□□□ -0.59
PTP1	YDL230W	TY1A-NL1	Q12391	440 aa	Known RBP	11.37	□□□□□ -0.59
PTP1	YDL230W	LSO1	Q3E827	93 aa		11.37	□□□□□ -0.59
PTP1	YDL230W	SAC7	P17121	654 aa		11.36	□□□□□ -0.59
PTP1	YDL230W	PRP2	P20095	876 aa	Predicted RBP	11.36	□□□□□ -0.59
PTP1	YDL230W	DBF2	P22204	572 aa		11.36	□□□□□ -0.59
PTP1	YDL230W	HSP30	P25619	332 aa		11.36	□□□□□ -0.59
PTP1	YDL230W	ECM15	P35195	104 aa		11.36	□□□□□ -0.59
PTP1	YDL230W	MCM7	P38132	845 aa		11.36	□□□□□ -0.59
PTP1	YDL230W	PRP39	P39682	629 aa	Known RBP	11.36	□□□□□ -0.59
PTP1	YDL230W	PZF1	P39933	429 aa		11.36	□□□□□ -0.59
PTP1	YDL230W	YKE4	P40544	346 aa		11.36	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms