RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	OST6	Q03723	332 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	YFT2	Q06676	274 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	IRC13	Q08630	104 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	YBL113C	Q7M4S9	792 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	YOL162W	P0CF19	215 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	AAC3	P18238	307 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	APN1	P22936	367 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	YCR100C	P25606	316 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	ACH1	P32316	526 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	YMC1	P32331	307 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	SRB5	P32585	307 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	KAP122	P32767	1081 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	6.57	□□□□□ -1.36	not detected
CDC7	YDL017W	YPT7	P32939	208 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	FMO1	P38866	432 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	SER2	P42941	309 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	FAA4	P47912	694 aa	Known RBP	6.57	□□□□□ -1.36
CDC7	YDL017W	MSE1	P48525	536 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	VPS73	P53142	486 aa	Known RBP	6.57	□□□□□ -1.36
CDC7	YDL017W	MRH4	P53166	561 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	FDC1	Q03034	503 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	YDR541C	Q03049	344 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	YLR346C	Q06139	101 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	YLR173W	Q06247	608 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	CDA2	Q06703	312 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	NOP12	Q08208	459 aa	Known RBP	6.57	□□□□□ -1.36
CDC7	YDL017W	CRT10	Q08226	957 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	PEX27	Q08580	376 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	UIP4	Q08926	304 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	YDL211C	Q12121	372 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	LEU9	Q12166	604 aa	Known RBP	6.57	□□□□□ -1.36
CDC7	YDL017W	TPO4	Q12256	659 aa		6.57	□□□□□ -1.36
CDC7	YDL017W	RRP12	Q12754	1228 aa	Known RBP	6.57	□□□□□ -1.36
CDC7	YDL017W	DPM1	P14020	267 aa	Known RBP	6.56	□□□□□ -1.36
CDC7	YDL017W	ARC19	P33204	171 aa	Known RBP	6.56	□□□□□ -1.36
CDC7	YDL017W	SNU114	P36048	1008 aa	Known RBP	6.56	□□□□□ -1.36
CDC7	YDL017W	AUR1	P36107	401 aa	Predicted RBP	6.56	□□□□□ -1.36
CDC7	YDL017W	RTC2	P38279	296 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	MBA1	P38300	278 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	MIT1	P40002	666 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	GIP2	P40036	548 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	GDS1	P41913	522 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	CIS3	P47001	227 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	YKR011C	Q02209	353 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	YDR514C	Q04408	483 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	YPQ2	Q06328	317 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	FRE5	Q08908	694 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	SPC3	Q12133	184 aa		6.56	□□□□□ -1.36
CDC7	YDL017W	CAP2	P13517	287 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	ERD1	P16151	362 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	PTR2	P32901	601 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	ECM15	P35195	104 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	YOR062C	P36025	268 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	RSM22	P36056	628 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	YKL077W	P36081	392 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	SHE1	P38200	338 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	RPS20	P38701	121 aa	Known RBP	6.55	□□□□□ -1.36
CDC7	YDL017W	ECM34	P38728	170 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	TRR2	P38816	342 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	CHL4	P38907	458 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	PRP39	P39682	629 aa	Known RBP	6.55	□□□□□ -1.36
CDC7	YDL017W	YNL195C	P40168	261 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	PFS2	P42841	465 aa	Known RBP	6.55	□□□□□ -1.36
CDC7	YDL017W	BPL1	P48445	690 aa	Predicted RBP	6.55	□□□□□ -1.36
CDC7	YDL017W	MNT4	P53745	580 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	YEH1	Q07804	573 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	THI73	Q07904	523 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	PCL9	Q12477	304 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	YEL009C-A	A0A023PZF2	135 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	RAS1	P01119	309 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	MCK1	P21965	375 aa	Known RBP	6.55	□□□□□ -1.36
CDC7	YDL017W	HSP30	P25619	332 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	CDC12	P32468	407 aa	Known RBP	6.55	□□□□□ -1.36
CDC7	YDL017W	ORC2	P32833	620 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	COS10	P52924	374 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	RNH70	P53331	553 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	NIS1	P53939	407 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	PFA5	Q03289	374 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	ORM2	Q06144	216 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	ARV1	Q06541	321 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	OPT2	Q06593	877 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	RKM1	Q08961	583 aa	Predicted RBP	6.55	□□□□□ -1.36
CDC7	YDL017W	YDR262W	Q12331	272 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	MMP1	Q12372	583 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	APC2	Q12440	853 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	YDL007C-A	Q2V2Q0	85 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	YGR161W-C	Q3E744	92 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	SUS1	Q6WNK7	96 aa		6.55	□□□□□ -1.36
CDC7	YDL017W	TOD6	P34219	525 aa		6.54	□□□□□ -1.36
CDC7	YDL017W	RPS0B	P46654	252 aa	Known RBP	6.54	□□□□□ -1.36
CDC7	YDL017W	SPT20	P50875	604 aa		6.54	□□□□□ -1.36
CDC7	YDL017W	YGL101W	P53144	215 aa		6.54	□□□□□ -1.36
CDC7	YDL017W	IMO32	P53219	342 aa		6.54	□□□□□ -1.36
CDC7	YDL017W	PGA1	P53896	198 aa		6.54	□□□□□ -1.36
CDC7	YDL017W	YAT1	P80235	687 aa		6.54	□□□□□ -1.36
CDC7	YDL017W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
CDC7	YDL017W	NOG1	Q02892	647 aa	Known RBP	6.54	□□□□□ -1.36
CDC7	YDL017W	SEC13	Q04491	297 aa	Known RBP	6.54	□□□□□ -1.36
CDC7	YDL017W	SMA2	Q04658	369 aa		6.54	□□□□□ -1.36
CDC7	YDL017W	RRN11	Q04712	507 aa		6.54	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms