RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W SRB4P32569 687 aa2.45□□□□□ -2.02
SPB1YCL054W TVP38P36164 337 aa2.45□□□□□ -2.02
SPB1YCL054W KAP104P38217 918 aaKnown RBP2.45□□□□□ -2.02
SPB1YCL054W GAA1P39012 614 aa2.45□□□□□ -2.02
SPB1YCL054W HMF1P40037 129 aaKnown RBP2.45□□□□□ -2.02
SPB1YCL054W YIL024CP40543 189 aa2.45□□□□□ -2.02
SPB1YCL054W RRT5P43607 289 aa2.45□□□□□ -2.02
SPB1YCL054W LIA1P47120 325 aaKnown RBP2.45□□□□□ -2.02
SPB1YCL054W ABM1P47146 123 aa2.45□□□□□ -2.02
SPB1YCL054W BRO1P48582 844 aa2.45□□□□□ -2.02
SPB1YCL054W PHB2P50085 310 aa2.45□□□□□ -2.02
SPB1YCL054W SPO19Q03029 223 aa2.45□□□□□ -2.02
SPB1YCL054W YMR102CQ03177 834 aa2.45□□□□□ -2.02
SPB1YCL054W MRPS17Q03246 237 aaPredicted RBP2.45□□□□□ -2.02
SPB1YCL054W CAB5Q03941 241 aa2.45□□□□□ -2.02
SPB1YCL054W CSM3Q04659 317 aa2.45□□□□□ -2.02
SPB1YCL054W VAC14Q06708 880 aa2.45□□□□□ -2.02
SPB1YCL054W PAA1Q12447 191 aaKnown RBP2.45□□□□□ -2.02
SPB1YCL054W YIL002W-AQ3E7Z5 69 aa2.45□□□□□ -2.02
SPB1YCL054W PGK1P00560 416 aaKnown RBP2.44□□□□□ -2.02
SPB1YCL054W MAS1P10507 462 aa2.44□□□□□ -2.02
SPB1YCL054W YCP4P25349 247 aaKnown RBP2.44□□□□□ -2.02
SPB1YCL054W COT1P32798 439 aa2.44□□□□□ -2.02
SPB1YCL054W RRP1P35178 278 aaPredicted RBP2.44□□□□□ -2.02
SPB1YCL054W SWC5P38326 303 aa2.44□□□□□ -2.02
SPB1YCL054W ALP1P38971 573 aa2.44□□□□□ -2.02
SPB1YCL054W VPS25P47142 202 aa2.44□□□□□ -2.02
SPB1YCL054W HMS2P47175 358 aa2.44□□□□□ -2.02
SPB1YCL054W FRE4P53746 719 aa2.44□□□□□ -2.02
SPB1YCL054W SRL4Q03085 281 aa2.44□□□□□ -2.02
SPB1YCL054W ERV41Q04651 352 aa2.44□□□□□ -2.02
SPB1YCL054W GLO2Q05584 274 aa2.44□□□□□ -2.02
SPB1YCL054W YLL007CQ07799 665 aa2.44□□□□□ -2.02
SPB1YCL054W NRT1Q08485 598 aa2.44□□□□□ -2.02
SPB1YCL054W HIS4P00815 799 aaKnown RBP2.44□□□□□ -2.02
SPB1YCL054W DST1P07273 309 aa2.44□□□□□ -2.02
SPB1YCL054W YFL068WP0CX99 160 aa2.44□□□□□ -2.02
SPB1YCL054W YLL066W-AP0CY00 160 aa2.44□□□□□ -2.02
SPB1YCL054W YLL067W-AP0CY01 160 aa2.44□□□□□ -2.02
SPB1YCL054W CDC42P19073 191 aa2.44□□□□□ -2.02
SPB1YCL054W YAP1P19880 650 aaKnown RBP2.44□□□□□ -2.02
SPB1YCL054W REC114P32841 428 aa2.44□□□□□ -2.02
SPB1YCL054W SKN1P33336 771 aa2.44□□□□□ -2.02
SPB1YCL054W FRE2P36033 711 aa2.44□□□□□ -2.02
SPB1YCL054W YKR015CP36111 568 aa2.44□□□□□ -2.02
SPB1YCL054W ECM4P36156 370 aa2.44□□□□□ -2.02
SPB1YCL054W MRPL37P36532 105 aa2.44□□□□□ -2.02
SPB1YCL054W YCR041WP37265 110 aa2.44□□□□□ -2.02
SPB1YCL054W FLO5P38894 1075 aa2.44□□□□□ -2.02
SPB1YCL054W TVP23P38962 199 aa2.44□□□□□ -2.02
SPB1YCL054W GTO1P48239 356 aa2.44□□□□□ -2.02
SPB1YCL054W YDL186WP48568 277 aa2.44□□□□□ -2.02
SPB1YCL054W MPP6P53725 186 aaPredicted RBP2.44□□□□□ -2.02
SPB1YCL054W PGA2P53903 129 aa2.44□□□□□ -2.02
SPB1YCL054W YLR173WQ06247 608 aa2.44□□□□□ -2.02
SPB1YCL054W SMC5Q08204 1093 aa2.44□□□□□ -2.02
SPB1YCL054W YLL056CQ12177 298 aa2.44□□□□□ -2.02
SPB1YCL054W LSP1Q12230 341 aaKnown RBP2.44□□□□□ -2.02
SPB1YCL054W YDR262WQ12331 272 aa2.44□□□□□ -2.02
SPB1YCL054W SPO24Q3E752 67 aa2.44□□□□□ -2.02
SPB1YCL054W FKS1P38631 1876 aaKnown RBP2.44□□□□□ -2.02
SPB1YCL054W UBR2Q07963 1872 aa2.43□□□□□ -2.02
SPB1YCL054W UGA1P17649 471 aa2.43□□□□□ -2.02
SPB1YCL054W DAL81P21657 970 aa2.43□□□□□ -2.02
SPB1YCL054W AIM17P23180 465 aaKnown RBP2.43□□□□□ -2.02
SPB1YCL054W MEK1P24719 497 aaPredicted RBP2.43□□□□□ -2.02
SPB1YCL054W MSK1P32048 576 aa2.43□□□□□ -2.02
SPB1YCL054W ERG1P32476 496 aaKnown RBP2.43□□□□□ -2.02
SPB1YCL054W VRG4P40107 337 aa2.43□□□□□ -2.02
SPB1YCL054W BNA3P47039 444 aaKnown RBP2.43□□□□□ -2.02
SPB1YCL054W TRF5P48561 642 aaKnown RBP2.43□□□□□ -2.02
SPB1YCL054W EFM5P53200 248 aaKnown RBP2.43□□□□□ -2.02
SPB1YCL054W YNR048WP53740 393 aa2.43□□□□□ -2.02
SPB1YCL054W GIM3P53900 129 aa2.43□□□□□ -2.02
SPB1YCL054W YNL134CP53912 376 aaKnown RBP2.43□□□□□ -2.02
SPB1YCL054W ASA1Q06822 443 aa2.43□□□□□ -2.02
SPB1YCL054W AAD15Q08361 143 aa2.43□□□□□ -2.02
SPB1YCL054W PEX27Q08580 376 aa2.43□□□□□ -2.02
SPB1YCL054W TIP41Q12199 356 aa2.43□□□□□ -2.02
SPB1YCL054W YDL009CQ12210 107 aa2.43□□□□□ -2.02
SPB1YCL054W GIS3Q12418 502 aa2.43□□□□□ -2.02
SPB1YCL054W YBL111CQ3E7Y5 667 aa2.43□□□□□ -2.02
SPB1YCL054W TUB1P09733 447 aaKnown RBP2.43□□□□□ -2.02
SPB1YCL054W CLN3P13365 580 aa2.43□□□□□ -2.02
SPB1YCL054W PRP16P15938 1071 aaPredicted RBP2.43□□□□□ -2.02
SPB1YCL054W MDM10P18409 493 aa2.43□□□□□ -2.02
SPB1YCL054W CKI1P20485 582 aa2.43□□□□□ -2.02
SPB1YCL054W LSB5P25369 354 aa2.43□□□□□ -2.02
SPB1YCL054W YPS1P32329 569 aa2.43□□□□□ -2.02
SPB1YCL054W SIP2P34164 415 aaKnown RBP2.43□□□□□ -2.02
SPB1YCL054W DRE2P36152 348 aa2.43□□□□□ -2.02
SPB1YCL054W TAE1P38340 232 aa2.43□□□□□ -2.02
SPB1YCL054W SIP3P38717 1229 aa2.43□□□□□ -2.02
SPB1YCL054W PET100P38958 111 aa2.43□□□□□ -2.02
SPB1YCL054W LYS1P38998 373 aaRIP-Chip data2.43□□□□□ -2.02not detected
SPB1YCL054W HAT2P39984 401 aa2.43□□□□□ -2.02
SPB1YCL054W PCL6P40038 420 aa2.43□□□□□ -2.02
SPB1YCL054W YPL068CQ02749 293 aa2.43□□□□□ -2.02
SPB1YCL054W PNG1Q02890 363 aa2.43□□□□□ -2.02
SPB1YCL054W RSN1Q03516 953 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms