RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeast

Gene RER1, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RER1	YCL001W	BRR2	P32639	2163 aa	Known RBP	4.16	□□□□□ -1.74
RER1	YCL001W	ARG4	P04076	463 aa	Predicted RBP	4.15	□□□□□ -1.75
RER1	YCL001W	HEM2	P05373	342 aa		4.15	□□□□□ -1.75
RER1	YCL001W	CDC21	P06785	304 aa		4.15	□□□□□ -1.75
RER1	YCL001W	SPT3	P06844	337 aa		4.15	□□□□□ -1.75
RER1	YCL001W	YCR090C	P25654	182 aa	Known RBP	4.15	□□□□□ -1.75
RER1	YCL001W	CRM1	P30822	1084 aa	Known RBP	4.15	□□□□□ -1.75
RER1	YCL001W	SFC1	P33303	322 aa		4.15	□□□□□ -1.75
RER1	YCL001W	PEP8	P40335	379 aa		4.15	□□□□□ -1.75
RER1	YCL001W	ARE2	P53629	642 aa	Known RBP	4.15	□□□□□ -1.75
RER1	YCL001W	YMR209C	Q03648	457 aa		4.15	□□□□□ -1.75
RER1	YCL001W	RAD30	Q04049	632 aa		4.15	□□□□□ -1.75
RER1	YCL001W	PPT2	Q12036	173 aa		4.15	□□□□□ -1.75
RER1	YCL001W	ATG29	Q12092	213 aa		4.15	□□□□□ -1.75
RER1	YCL001W	RUD3	Q12234	484 aa	Known RBP	4.15	□□□□□ -1.75
RER1	YCL001W	YPL247C	Q12523	523 aa		4.15	□□□□□ -1.75
RER1	YCL001W	SEC39	Q12745	709 aa		4.15	□□□□□ -1.75
RER1	YCL001W	LAG2	Q92325	660 aa		4.15	□□□□□ -1.75
RER1	YCL001W	BRR1	Q99177	341 aa	Predicted RBP	4.15	□□□□□ -1.75
RER1	YCL001W	HFA1	P32874	2273 aa		4.15	□□□□□ -1.75
RER1	YCL001W	RPB8	P20436	146 aa		4.14	□□□□□ -1.75
RER1	YCL001W	KKQ8	P36004	724 aa		4.14	□□□□□ -1.75
RER1	YCL001W	INM1	P38710	295 aa		4.14	□□□□□ -1.75
RER1	YCL001W	YHR218W	P38899	603 aa		4.14	□□□□□ -1.75
RER1	YCL001W	AXL1	P40851	1208 aa		4.14	□□□□□ -1.75
RER1	YCL001W	AZF1	P41696	914 aa		4.14	□□□□□ -1.75
RER1	YCL001W	SPG5	P42933	373 aa		4.14	□□□□□ -1.75
RER1	YCL001W	YJR030C	P47101	745 aa		4.14	□□□□□ -1.75
RER1	YCL001W	LIA1	P47120	325 aa	Known RBP	4.14	□□□□□ -1.75
RER1	YCL001W	YSA1	Q01976	231 aa		4.14	□□□□□ -1.75
RER1	YCL001W	RSM10	Q03201	203 aa		4.14	□□□□□ -1.75
RER1	YCL001W	YMR155W	Q03795	547 aa		4.14	□□□□□ -1.75
RER1	YCL001W	CSN9	Q03981	162 aa		4.14	□□□□□ -1.75
RER1	YCL001W	RRP45	Q05636	305 aa	Known RBP	4.14	□□□□□ -1.75
RER1	YCL001W	YLR053C	Q12026	108 aa		4.14	□□□□□ -1.75
RER1	YCL001W	STT4	P37297	1900 aa		4.13	□□□□□ -1.75
RER1	YCL001W	AAC3	P18238	307 aa		4.13	□□□□□ -1.75
RER1	YCL001W	TYR1	P20049	452 aa		4.13	□□□□□ -1.75
RER1	YCL001W	SAN1	P22470	610 aa		4.13	□□□□□ -1.75
RER1	YCL001W	IMG1	P25626	169 aa		4.13	□□□□□ -1.75
RER1	YCL001W	ADE1	P27616	306 aa		4.13	□□□□□ -1.75
RER1	YCL001W	MEI5	P32489	222 aa		4.13	□□□□□ -1.75
RER1	YCL001W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
RER1	YCL001W	RPS1A	P33442	255 aa	Known RBP	4.13	□□□□□ -1.75
RER1	YCL001W	YBR032W	P38223	100 aa		4.13	□□□□□ -1.75
RER1	YCL001W	PHO89	P38361	574 aa		4.13	□□□□□ -1.75
RER1	YCL001W	NOP16	P40007	231 aa	Known RBP	4.13	□□□□□ -1.75
RER1	YCL001W	COA1	P40452	197 aa		4.13	□□□□□ -1.75
RER1	YCL001W	PKP1	P40530	394 aa		4.13	□□□□□ -1.75
RER1	YCL001W	DPB11	P47027	764 aa	Predicted RBP	4.13	□□□□□ -1.75
RER1	YCL001W	IBD2	P53892	351 aa		4.13	□□□□□ -1.75
RER1	YCL001W	SLM2	P53955	656 aa		4.13	□□□□□ -1.75
RER1	YCL001W	RMI1	Q02685	241 aa		4.13	□□□□□ -1.75
RER1	YCL001W	RNY1	Q02933	434 aa	Known RBP	4.13	□□□□□ -1.75
RER1	YCL001W	TAF12	Q03761	539 aa		4.13	□□□□□ -1.75
RER1	YCL001W	YKU80	Q04437	629 aa		4.13	□□□□□ -1.75
RER1	YCL001W	PSR1	Q07800	427 aa		4.13	□□□□□ -1.75
RER1	YCL001W	YPL278C	Q08990	100 aa		4.13	□□□□□ -1.75
RER1	YCL001W	IRA1	P18963	3092 aa		4.13	□□□□□ -1.75
RER1	YCL001W	YCR051W	P25631	222 aa		4.12	□□□□□ -1.75
RER1	YCL001W	BUD14	P27637	709 aa		4.12	□□□□□ -1.75
RER1	YCL001W	PDB1	P32473	366 aa	Known RBP	4.12	□□□□□ -1.75
RER1	YCL001W	MRPL15	P36523	253 aa		4.12	□□□□□ -1.75
RER1	YCL001W	YBL029W	P38201	376 aa		4.12	□□□□□ -1.75
RER1	YCL001W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
RER1	YCL001W	BUR6	P40096	142 aa		4.12	□□□□□ -1.75
RER1	YCL001W	YIL086C	P40503	102 aa		4.12	□□□□□ -1.75
RER1	YCL001W	GCD10	P41814	478 aa		4.12	□□□□□ -1.75
RER1	YCL001W	AIF1	P52923	378 aa		4.12	□□□□□ -1.75
RER1	YCL001W	ERG26	P53199	349 aa	Known RBP	4.12	□□□□□ -1.75
RER1	YCL001W	EFM5	P53200	248 aa	Known RBP	4.12	□□□□□ -1.75
RER1	YCL001W	NNF2	P53253	936 aa		4.12	□□□□□ -1.75
RER1	YCL001W	YNL260C	P53846	198 aa		4.12	□□□□□ -1.75
RER1	YCL001W	PRO2	P54885	456 aa	Known RBP	4.12	□□□□□ -1.75
RER1	YCL001W	GIP3	Q03016	1276 aa		4.12	□□□□□ -1.75
RER1	YCL001W	GAS3	Q03655	524 aa		4.12	□□□□□ -1.75
RER1	YCL001W	ROY1	Q04847	553 aa		4.12	□□□□□ -1.75
RER1	YCL001W	FAR8	Q05040	523 aa		4.12	□□□□□ -1.75
RER1	YCL001W	SEC10	Q06245	871 aa		4.12	□□□□□ -1.75
RER1	YCL001W	YDL218W	Q07629	317 aa		4.12	□□□□□ -1.75
RER1	YCL001W	YPR022C	Q12139	1133 aa		4.12	□□□□□ -1.75
RER1	YCL001W	YOR114W	Q12219	294 aa		4.12	□□□□□ -1.75
RER1	YCL001W	NCA2	Q12374	616 aa		4.12	□□□□□ -1.75
RER1	YCL001W	SPE4	Q12455	300 aa		4.12	□□□□□ -1.75
RER1	YCL001W	RHO2	P06781	192 aa		4.11	□□□□□ -1.75
RER1	YCL001W	NMT1	P14743	455 aa		4.11	□□□□□ -1.75
RER1	YCL001W	HSC82	P15108	705 aa	Known RBP	4.11	□□□□□ -1.75
RER1	YCL001W	SRV2	P17555	526 aa	Known RBP	4.11	□□□□□ -1.75
RER1	YCL001W	SPS22	P25380	463 aa		4.11	□□□□□ -1.75
RER1	YCL001W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RER1	YCL001W	SDH3	P33421	198 aa		4.11	□□□□□ -1.75
RER1	YCL001W	RRN10	P38204	145 aa		4.11	□□□□□ -1.75
RER1	YCL001W	LIN1	P38852	340 aa	Predicted RBP	4.11	□□□□□ -1.75
RER1	YCL001W	PHO90	P39535	881 aa		4.11	□□□□□ -1.75
RER1	YCL001W	UIP3	P39547	235 aa		4.11	□□□□□ -1.75
RER1	YCL001W	APQ12	P40532	138 aa		4.11	□□□□□ -1.75
RER1	YCL001W	DIM1	P41819	318 aa	Known RBP	4.11	□□□□□ -1.75
RER1	YCL001W	ALK1	P43633	760 aa	Known RBP	4.11	□□□□□ -1.75
RER1	YCL001W	UPF3	P48412	387 aa	Known RBP	4.11	□□□□□ -1.75
RER1	YCL001W	DUO1	P53168	247 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms