RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C PDX1P16451 410 aa6.15□□□□□ -1.42
LDB7YBL006C DBP3P20447 523 aaKnown RBP6.15□□□□□ -1.42
LDB7YBL006C TOA1P32773 286 aa6.15□□□□□ -1.42
LDB7YBL006C TSL1P38427 1098 aaKnown RBP6.15□□□□□ -1.42
LDB7YBL006C SHO1P40073 367 aa6.15□□□□□ -1.42
LDB7YBL006C COG2P53271 262 aa6.15□□□□□ -1.42
LDB7YBL006C YPL039WQ03080 316 aa6.15□□□□□ -1.42
LDB7YBL006C COX20Q04935 205 aa6.15□□□□□ -1.42
LDB7YBL006C AVO1Q08236 1176 aa6.15□□□□□ -1.42
LDB7YBL006C HNT3Q08702 217 aa6.15□□□□□ -1.42
LDB7YBL006C GRE1Q08969 168 aa6.15□□□□□ -1.42
LDB7YBL006C MCP1Q12106 302 aa6.15□□□□□ -1.42
LDB7YBL006C UTR1P21373 530 aa6.14□□□□□ -1.43
LDB7YBL006C REC107P21651 314 aa6.14□□□□□ -1.43
LDB7YBL006C SAN1P22470 610 aa6.14□□□□□ -1.43
LDB7YBL006C DGR2P32330 852 aa6.14□□□□□ -1.43
LDB7YBL006C HEK2P38199 381 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43 RIP-Chip
LDB7YBL006C RRP4P38792 359 aaKnown RBP6.14□□□□□ -1.43
LDB7YBL006C YHR180WP38868 163 aa6.14□□□□□ -1.43
LDB7YBL006C YHR219WP38900 624 aa6.14□□□□□ -1.43
LDB7YBL006C ARF3P40994 183 aaRIP-Chip data6.14□□□□□ -1.43not detected
LDB7YBL006C MSY1P48527 492 aa6.14□□□□□ -1.43
LDB7YBL006C TWF1P53250 332 aa6.14□□□□□ -1.43
LDB7YBL006C SYF2P53277 215 aaPredicted RBP6.14□□□□□ -1.43
LDB7YBL006C YNL181WP53878 407 aa6.14□□□□□ -1.43
LDB7YBL006C INN1P53901 409 aa6.14□□□□□ -1.43
LDB7YBL006C SPO77Q06134 477 aa6.14□□□□□ -1.43
LDB7YBL006C ARO10Q06408 635 aa6.14□□□□□ -1.43
LDB7YBL006C PSR1Q07800 427 aa6.14□□□□□ -1.43
LDB7YBL006C RRT8Q08219 342 aa6.14□□□□□ -1.43
LDB7YBL006C BRX1Q08235 291 aaKnown RBP6.14□□□□□ -1.43
LDB7YBL006C RDL2Q08742 149 aaKnown RBP6.14□□□□□ -1.43
LDB7YBL006C UGA1P17649 471 aa6.13□□□□□ -1.43
LDB7YBL006C NAB2P32505 525 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
LDB7YBL006C SSE1P32589 693 aaKnown RBP6.13□□□□□ -1.43
LDB7YBL006C SWH1P35845 1188 aa6.13□□□□□ -1.43
LDB7YBL006C MRPL39P36533 70 aa6.13□□□□□ -1.43
LDB7YBL006C YHL037CP38733 133 aa6.13□□□□□ -1.43
LDB7YBL006C MTC6P38849 526 aa6.13□□□□□ -1.43
LDB7YBL006C RSP5P39940 809 aaKnown RBP6.13□□□□□ -1.43
LDB7YBL006C MRX1P40050 688 aa6.13□□□□□ -1.43
LDB7YBL006C MET28P40573 187 aa6.13□□□□□ -1.43
LDB7YBL006C HXT9P40885 567 aa6.13□□□□□ -1.43
LDB7YBL006C YGR201CP42936 225 aa6.13□□□□□ -1.43
LDB7YBL006C HXT11P54862 567 aa6.13□□□□□ -1.43
LDB7YBL006C MRL1Q06815 381 aa6.13□□□□□ -1.43
LDB7YBL006C MUM3Q08750 479 aa6.13□□□□□ -1.43
LDB7YBL006C DYN1P36022 4092 aa6.13□□□□□ -1.43
LDB7YBL006C URA2P07259 2214 aaKnown RBP6.13□□□□□ -1.43
LDB7YBL006C MET2P08465 486 aa6.12□□□□□ -1.43
LDB7YBL006C ERD2P18414 219 aa6.12□□□□□ -1.43
LDB7YBL006C YHR097CP38809 366 aaKnown RBP6.12□□□□□ -1.43
LDB7YBL006C LSM4P40070 187 aaKnown RBP6.12□□□□□ -1.43
LDB7YBL006C YMR144WP40214 342 aaKnown RBP6.12□□□□□ -1.43
LDB7YBL006C RFC4P40339 323 aaKnown RBP6.12□□□□□ -1.43
LDB7YBL006C RLP7P40693 322 aaKnown RBP6.12□□□□□ -1.43
LDB7YBL006C SNM1P40993 198 aa6.12□□□□□ -1.43
LDB7YBL006C YFL051CP43552 160 aa6.12□□□□□ -1.43
LDB7YBL006C BUD9P53226 547 aa6.12□□□□□ -1.43
LDB7YBL006C YNL033WP53964 284 aa6.12□□□□□ -1.43
LDB7YBL006C YNL019CP53975 284 aa6.12□□□□□ -1.43
LDB7YBL006C YMR265CQ03508 461 aaKnown RBP6.12□□□□□ -1.43
LDB7YBL006C KRE28Q04431 385 aa6.12□□□□□ -1.43
LDB7YBL006C COQ11Q05892 277 aa6.12□□□□□ -1.43
LDB7YBL006C EMG1Q06287 252 aaKnown RBP6.12□□□□□ -1.43
LDB7YBL006C RAF1Q06891 181 aa6.12□□□□□ -1.43
LDB7YBL006C NOP12Q08208 459 aaKnown RBP6.12□□□□□ -1.43
LDB7YBL006C SNX3Q08826 162 aaKnown RBP6.12□□□□□ -1.43
LDB7YBL006C YDL109CQ12103 647 aa6.12□□□□□ -1.43
LDB7YBL006C ATP7P30902 174 aa6.11□□□□□ -1.43
LDB7YBL006C MAL32P38158 584 aa6.11□□□□□ -1.43
LDB7YBL006C YHL012WP38709 493 aa6.11□□□□□ -1.43
LDB7YBL006C TRM5P38793 499 aa6.11□□□□□ -1.43
LDB7YBL006C YHR218WP38899 603 aa6.11□□□□□ -1.43
LDB7YBL006C MPM1P40364 252 aa6.11□□□□□ -1.43
LDB7YBL006C NIT2P47016 307 aa6.11□□□□□ -1.43
LDB7YBL006C YJR142WP47173 342 aa6.11□□□□□ -1.43
LDB7YBL006C TOM22P49334 152 aa6.11□□□□□ -1.43
LDB7YBL006C LYS5P50113 272 aa6.11□□□□□ -1.43
LDB7YBL006C YGR126WP53274 230 aa6.11□□□□□ -1.43
LDB7YBL006C VBA4Q04602 768 aaKnown RBP6.11□□□□□ -1.43
LDB7YBL006C THP1Q08231 455 aa6.11□□□□□ -1.43
LDB7YBL006C YIG1Q08956 461 aa6.11□□□□□ -1.43
LDB7YBL006C RLM1Q12224 676 aa6.11□□□□□ -1.43
LDB7YBL006C SFM1Q12314 213 aa6.11□□□□□ -1.43
LDB7YBL006C WTM1Q12363 437 aaKnown RBP6.11□□□□□ -1.43
LDB7YBL006C YDL199CQ12407 687 aa6.11□□□□□ -1.43
LDB7YBL006C DFG16Q99234 619 aa6.11□□□□□ -1.43
LDB7YBL006C RHO1P06780 209 aaKnown RBP6.1□□□□□ -1.43
LDB7YBL006C SUI3P09064 285 aaKnown RBP6.1□□□□□ -1.43
LDB7YBL006C PDA1P16387 420 aaKnown RBP6.1□□□□□ -1.43
LDB7YBL006C PRP4P20053 465 aaKnown RBP6.1□□□□□ -1.43
LDB7YBL006C MRP8P35719 219 aa6.1□□□□□ -1.43
LDB7YBL006C COG3P40094 801 aa6.1□□□□□ -1.43
LDB7YBL006C AVT7P40501 490 aa6.1□□□□□ -1.43
LDB7YBL006C GPP1P41277 250 aaKnown RBP6.1□□□□□ -1.43
LDB7YBL006C NUP57P48837 541 aa6.1□□□□□ -1.43
LDB7YBL006C MPC1P53157 130 aaKnown RBP6.1□□□□□ -1.43
LDB7YBL006C DMA2P53924 522 aa6.1□□□□□ -1.43
LDB7YBL006C SVL3Q03088 825 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms