RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP60	YAR002W	PRE6	P40303	254 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	SOK1	P40317	901 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	AIM20	P40451	204 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	MAD2	P40958	196 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YGR201C	P42936	225 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	PRM10	P42946	383 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	SWP82	P43554	623 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	BIT61	P47041	543 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	EFM3	P47163	339 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	PAC10	P48363	199 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	ERG26	P53199	349 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	GRX5	Q02784	150 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	RSC9	Q03124	581 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YMR210W	Q03649	449 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	TRM82	Q03774	444 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	RRP17	Q04031	235 aa	Predicted RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	GAL83	Q04739	417 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	ROY1	Q04847	553 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	PDR8	Q06149	701 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YLR040C	Q07988	224 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	REX4	Q08237	289 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	FRE5	Q08908	694 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	SAM4	Q08985	325 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	YGK3	Q12222	375 aa	Predicted RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	SFM1	Q12314	213 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	PST2	Q12335	198 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	MRX4	Q12467	430 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	CET1	O13297	549 aa	Predicted RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	MDM35	O60200	86 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	STE7	P06784	515 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	DBP3	P20447	523 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	RRP7	P25368	297 aa	Predicted RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	IMG2	P25642	146 aa	Predicted RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	ADE1	P27616	306 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
NUP60	YAR002W	PUP2	P32379	260 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	MKK1	P32490	508 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	PET309	P32522	965 aa	Predicted RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	RPN2	P32565	945 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	NUF2	P33895	451 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	MRPL37	P36532	105 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	BNA4	P38169	460 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	ZTA1	P38230	334 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	ARN2	P38724	620 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	MET30	P39014	640 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	RCY1	P39531	840 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	AST2	P39945	430 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	FAU1	P40099	211 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	MNT3	P40549	630 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	STE24	P47154	453 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	MSE1	P48525	536 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	RAD17	P48581	401 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	ROG1	P53118	685 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	COX18	P53239	316 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YGR079W	P53249	370 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YNR061C	P53747	219 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YKR005C	Q02203	525 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	SMA1	Q02651	245 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YPL113C	Q02961	396 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	MSC1	Q03104	513 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YMD8	Q03697	442 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	RIM13	Q03792	727 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	GPI17	Q04080	534 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YLR345W	Q06137	509 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	ARO10	Q06408	635 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	MDM36	Q06820	579 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	GSH2	Q08220	491 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	RRP40	Q08285	240 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	YPL191C	Q08930	360 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	PFA4	Q12006	378 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	NFI1	Q12216	726 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YOR114W	Q12219	294 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	TRM13	Q12383	476 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YPR064W	Q12492	139 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	RPS21B	Q3E754	87 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	NAG1	Q8TGN9	163 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	RPC40	P07703	335 aa	Known RBP	3.18	□□□□□ -1.9
NUP60	YAR002W	ZWF1	P11412	505 aa	Known RBP	3.18	□□□□□ -1.9
NUP60	YAR002W	PET9	P18239	318 aa	Known RBP	3.18	□□□□□ -1.9
NUP60	YAR002W	SCL1	P21243	252 aa	Known RBP	3.18	□□□□□ -1.9
NUP60	YAR002W	RIB7	P33312	244 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	ASC1	P38011	319 aa	Known RBP	3.18	□□□□□ -1.9
NUP60	YAR002W	AIM2	P39721	246 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	VRG4	P40107	337 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	RRG9	P40156	214 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	JLP2	P40206	208 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	LYS12	P40495	371 aa	Known RBP	3.18	□□□□□ -1.9
NUP60	YAR002W	YJL163C	P46996	555 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	COQ5	P49017	307 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	MTL1	P53214	551 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	NQM1	P53228	333 aa	Predicted RBP	3.18	□□□□□ -1.9
NUP60	YAR002W	TWF1	P53250	332 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	CSL4	P53859	292 aa	Predicted RBP	3.18	□□□□□ -1.9
NUP60	YAR002W	MGR3	Q04472	501 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	RNH1	Q04740	348 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	NEJ1	Q06148	342 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	YOL073C	Q08232	322 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	DCI1	Q08558	271 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	PUS9	Q12069	462 aa		3.18	□□□□□ -1.9
NUP60	YAR002W	RPN13	O13563	156 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms