RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C AGX1P43567 385 aa12.35□□□□□ -0.43
SSA1YAL005C RET2P43621 546 aa12.35□□□□□ -0.43
SSA1YAL005C IMD4P50094 524 aaKnown RBP12.35□□□□□ -0.43
SSA1YAL005C YPL068CQ02749 293 aa12.35□□□□□ -0.43
SSA1YAL005C ERB1Q04660 807 aaKnown RBP12.35□□□□□ -0.43
SSA1YAL005C NNT1Q05874 261 aa12.35□□□□□ -0.43
SSA1YAL005C VID22Q05934 901 aa12.35□□□□□ -0.43
SSA1YAL005C IFA38P38286 347 aa12.34□□□□□ -0.43
SSA1YAL005C YBR285WP38354 144 aa12.34□□□□□ -0.43
SSA1YAL005C YDL211CQ12121 372 aa12.34□□□□□ -0.43
SSA1YAL005C PUP1P25043 261 aa12.33□□□□□ -0.44
SSA1YAL005C DBP6P53734 629 aaKnown RBP12.33□□□□□ -0.44
SSA1YAL005C TMA7Q3E764 64 aaKnown RBP12.33□□□□□ -0.44
SSA1YAL005C AI1P03875 834 aa12.33□□□□□ -0.44
SSA1YAL005C KSS1P14681 368 aa12.33□□□□□ -0.44
SSA1YAL005C LST4P34239 828 aa12.33□□□□□ -0.44
SSA1YAL005C ECM8P38246 354 aa12.33□□□□□ -0.44
SSA1YAL005C YHR097CP38809 366 aaKnown RBP12.33□□□□□ -0.44
SSA1YAL005C PDS1P40316 373 aaPredicted RBP12.33□□□□□ -0.44
SSA1YAL005C SEH1P53011 349 aaKnown RBP12.33□□□□□ -0.44
SSA1YAL005C DFG5Q05031 458 aa12.33□□□□□ -0.44
SSA1YAL005C ITR1P30605 584 aa12.32□□□□□ -0.44
SSA1YAL005C RIB7P33312 244 aa12.32□□□□□ -0.44
SSA1YAL005C YER158CP40095 573 aa12.32□□□□□ -0.44
SSA1YAL005C CUP9P41817 306 aa12.32□□□□□ -0.44
SSA1YAL005C REX3Q12090 404 aa12.32□□□□□ -0.44
SSA1YAL005C PRP46Q12417 451 aaPredicted RBP12.32□□□□□ -0.44
SSA1YAL005C YOL163WP0CF20 169 aa12.31□□□□□ -0.44
SSA1YAL005C NAR1P23503 491 aaKnown RBP12.31□□□□□ -0.44
SSA1YAL005C MON1P53129 644 aa12.31□□□□□ -0.44
SSA1YAL005C NCE101Q02820 53 aa12.31□□□□□ -0.44
SSA1YAL005C DAT1P13483 248 aaKnown RBP12.31□□□□□ -0.44
SSA1YAL005C RRP7P25368 297 aaPredicted RBP12.31□□□□□ -0.44
SSA1YAL005C YBR139WP38109 508 aa12.31□□□□□ -0.44
SSA1YAL005C SPO19Q03029 223 aa12.31□□□□□ -0.44
SSA1YAL005C RTC5Q12108 567 aaKnown RBP12.31□□□□□ -0.44
SSA1YAL005C TPO4Q12256 659 aa12.31□□□□□ -0.44
SSA1YAL005C YPT1P01123 206 aaKnown RBP12.3□□□□□ -0.44
SSA1YAL005C SEN2P16658 377 aa12.3□□□□□ -0.44
SSA1YAL005C KGD1P20967 1014 aaKnown RBP12.3□□□□□ -0.44
SSA1YAL005C KRE6P32486 720 aa12.3□□□□□ -0.44
SSA1YAL005C ORC2P32833 620 aa12.3□□□□□ -0.44
SSA1YAL005C SRO77P38163 1010 aa12.3□□□□□ -0.44
SSA1YAL005C MDV1P47025 714 aa12.3□□□□□ -0.44
SSA1YAL005C HMS2P47175 358 aa12.3□□□□□ -0.44
SSA1YAL005C SHE4P51534 789 aa12.3□□□□□ -0.44
SSA1YAL005C SNF12P53628 566 aa12.3□□□□□ -0.44
SSA1YAL005C SKI7Q08491 747 aaPredicted RBP12.3□□□□□ -0.44
SSA1YAL005C PBN1P25580 416 aa12.29□□□□□ -0.44
SSA1YAL005C HBS1P32769 611 aaKnown RBP12.29□□□□□ -0.44
SSA1YAL005C EMP70P32802 667 aa12.29□□□□□ -0.44
SSA1YAL005C BCK2P33306 851 aa12.29□□□□□ -0.44
SSA1YAL005C MPH1P40562 993 aa12.29□□□□□ -0.44
SSA1YAL005C YJL055WP47044 245 aa12.29□□□□□ -0.44
SSA1YAL005C YLR460CP54007 376 aa12.29□□□□□ -0.44
SSA1YAL005C SMP3Q04174 516 aa12.29□□□□□ -0.44
SSA1YAL005C MDM30Q05930 598 aa12.29□□□□□ -0.44
SSA1YAL005C CRT10Q08226 957 aa12.29□□□□□ -0.44
SSA1YAL005C AKR2Q12013 749 aa12.29□□□□□ -0.44
SSA1YAL005C YOR214CQ12282 236 aa12.29□□□□□ -0.44
SSA1YAL005C YPL119C-AQ3E751 87 aa12.29□□□□□ -0.44
SSA1YAL005C YEL068CP39977 110 aa12.29□□□□□ -0.44
SSA1YAL005C YGR168CP53293 376 aa12.29□□□□□ -0.44
SSA1YAL005C NPC2Q12408 173 aa12.29□□□□□ -0.44
SSA1YAL005C PAR32Q12515 295 aaKnown RBP12.29□□□□□ -0.44
SSA1YAL005C GLT1Q12680 2145 aaKnown RBP12.28□□□□□ -0.44
SSA1YAL005C YCR100CP25606 316 aa12.28□□□□□ -0.44
SSA1YAL005C ITR2P30606 609 aa12.28□□□□□ -0.44
SSA1YAL005C CTF8P38877 133 aa12.28□□□□□ -0.44
SSA1YAL005C PET100P38958 111 aa12.28□□□□□ -0.44
SSA1YAL005C SIT1P39980 628 aa12.28□□□□□ -0.44
SSA1YAL005C YPT7P32939 208 aa12.27□□□□□ -0.44
SSA1YAL005C MIA40P36046 403 aa12.27□□□□□ -0.44
SSA1YAL005C ALG3P38179 458 aa12.27□□□□□ -0.44
SSA1YAL005C YIL166CP40445 542 aa12.27□□□□□ -0.44
SSA1YAL005C CIN1P40987 1014 aa12.27□□□□□ -0.44
SSA1YAL005C URC2Q04411 772 aa12.27□□□□□ -0.44
SSA1YAL005C PAL1Q05518 499 aaKnown RBP12.27□□□□□ -0.44
SSA1YAL005C SEI1Q06058 285 aa12.27□□□□□ -0.44
SSA1YAL005C BRX1Q08235 291 aaKnown RBP12.27□□□□□ -0.44
SSA1YAL005C SNU114P36048 1008 aaKnown RBP12.27□□□□□ -0.45
SSA1YAL005C YNL208WP40159 199 aaKnown RBP12.27□□□□□ -0.45
SSA1YAL005C SHR5P41912 237 aa12.27□□□□□ -0.45
SSA1YAL005C RSN1Q03516 953 aa12.27□□□□□ -0.45
SSA1YAL005C MHF1Q3E835 90 aa12.27□□□□□ -0.45
SSA1YAL005C SEC61P32915 480 aa12.26□□□□□ -0.45
SSA1YAL005C YKR011CQ02209 353 aa12.26□□□□□ -0.45
SSA1YAL005C YOR376WQ08900 122 aa12.26□□□□□ -0.45
SSA1YAL005C YPR015CQ12531 247 aa12.26□□□□□ -0.45
SSA1YAL005C HAA1Q12753 694 aaKnown RBP12.26□□□□□ -0.45
SSA1YAL005C URE2P23202 354 aaKnown RBP12.25□□□□□ -0.45
SSA1YAL005C ASF2P32448 525 aaPredicted RBP12.25□□□□□ -0.45
SSA1YAL005C SSE2P32590 693 aaKnown RBP12.25□□□□□ -0.45
SSA1YAL005C GCN20P43535 752 aaKnown RBP12.25□□□□□ -0.45
SSA1YAL005C BAT2P47176 376 aaKnown RBP12.25□□□□□ -0.45
SSA1YAL005C RSM10Q03201 203 aa12.25□□□□□ -0.45
SSA1YAL005C TAD3Q9URQ3 322 aa12.25□□□□□ -0.45
SSA1YAL005C ADE5,7P07244 802 aaKnown RBP12.25□□□□□ -0.45
SSA1YAL005C ARF1P11076 181 aaKnown RBP12.25□□□□□ -0.45
SSA1YAL005C LDB16P25587 256 aa12.25□□□□□ -0.45
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms