RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 NRCAMQ92823 1304 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 TRIM43BA6NCK2 446 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 M0QZ92 97 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 HAS3O00219 553 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 KIAA0355O15063 1070 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 TBX3O15119 743 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 SIAH2O43255 324 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 DKC1O60832 514 aaKnown RBP eCLIP8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 CCNE2O96020 404 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 CD4P01730 458 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 CYP2C18P33260 490 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 TXKP42681 527 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 TRAPPC10P48553 1259 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 SLC26A2P50443 739 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 CCL23P55773 120 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 PPIGQ13427 754 aaKnown RBP eCLIP8.12□□□□□ -1.111e-6■■□□□ 12.8
NPLOC4-221ENST00000625705 CUL4AQ13619 759 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 ZNF174Q15697 407 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 GRIK4Q16099 956 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 RSPH3Q86UC2 560 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 SESTD1Q86VW0 696 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 CCDC60Q8IWA6 550 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 SLC43A3Q8NBI5 491 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 RDM1Q8NG50 284 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 TNFRSF25Q93038 417 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 TRIM43Q96BQ3 446 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 INTS4Q96HW7 963 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 FAM167AQ96KS9 214 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 SETD4Q9NVD3 440 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 GABBR1Q9UBS5 961 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 TUBE1Q9UJT0 475 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 TBX21Q9UL17 535 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 PCDHA12Q9UN75 941 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 TELO2Q9Y4R8 837 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 LTBP2Q14767 1821 aa8.12□□□□□ -1.11
NPLOC4-221ENST00000625705 RRN3P2A6NIE6 340 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 KIF28PB7ZC32 967 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 DHX15O43143 795 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 HBP1O60381 514 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 LGR5O75473 907 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 PSMD10O75832 226 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 TIMP1P01033 207 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 OR52Z1P0C646 297 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 THPOP40225 353 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 ZNF200P98182 395 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 PRKCEQ02156 737 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 KCNH2Q12809 1159 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 PTK7Q13308 1070 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 ORC2Q13416 577 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 RILPL1Q5EBL4 403 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 TREML4Q6UXN2 200 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 ABHD15Q6UXT9 468 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 PLPPR4Q7Z2D5 763 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 FERMT3Q86UX7 667 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 BANK1Q8NDB2 785 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 ERMNQ8TAM6 284 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 ETNPPLQ8TBG4 499 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 CAGE1Q8TC20 777 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 LMBR1Q8WVP7 490 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 BAP1Q92560 729 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 MBOAT7Q96N66 472 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 SCLT1Q96NL6 688 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 NOC4LQ9BVI4 516 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 RAB34Q9BZG1 259 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 FTOQ9C0B1 505 aaKnown RBP eCLIP8.11□□□□□ -1.113e-7■■■□□ 17.7
NPLOC4-221ENST00000625705 FAM49AQ9H0Q0 323 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 MTIF3Q9H2K0 278 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 RNPEPQ9H4A4 650 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 TTC12Q9H892 705 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 KCNMB3Q9NPA1 279 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 CEP131Q9UPN4 1083 aa8.11□□□□□ -1.11
NPLOC4-221ENST00000625705 MYH9P35579 1960 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 TREHO43280 583 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 ATG7O95352 703 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 CTSHP09668 335 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 INSRRP14616 1297 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 SNRPBP14678 240 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 CSF2RAP15509 400 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 U2AF2P26368 475 aaKnown RBP eCLIP8.1□□□□□ -1.119e-7■■■■□ 22.5
NPLOC4-221ENST00000625705 CYP4A11Q02928 519 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 PPP2R5CQ13362 524 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 PLCB4Q15147 1175 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 MFSD5Q6N075 450 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 TAF2Q6P1X5 1199 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 LRRC8DQ7L1W4 858 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 BRAPQ7Z569 592 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 DEFB128Q7Z7B8 93 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 RPUSD2Q8IZ73 545 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 METTL13Q8N6R0 699 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 AFAP1L1Q8TED9 768 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 ATP8B4Q8TF62 1192 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 TRAPPC12Q8WVT3 735 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 SCLYQ96I15 445 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 RNPC3Q96LT9 517 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 PCYT2Q99447 389 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 NRBP2Q9NSY0 501 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 TANC1Q9C0D5 1861 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 KAT6AQ92794 2004 aa8.1□□□□□ -1.11
NPLOC4-221ENST00000625705 COL1A2P08123 1366 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms