RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 BCL9LQ86UU0 1499 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 A0A087X0T9 212 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 M0R2N6 131 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 DNM1LO00429 736 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 FAM228BP0C875 321 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
SEC11A-206ENST00000558924 DLGAP5Q15398 846 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 MAGOHBQ96A72 148 aaKnown RBP13.2□□□□□ -0.3
SEC11A-206ENST00000558924 SPDL1Q96EA4 605 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 SH3GL2Q99962 352 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 REEP2Q9BRK0 252 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 HDAC9Q9UKV0 1011 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 RABGAP1Q9Y3P9 1069 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 PLTPP55058 493 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 ZKSCAN8Q15776 578 aaPredicted RBP13.2□□□□□ -0.3
SEC11A-206ENST00000558924 GUF1Q8N442 669 aaKnown RBP13.2□□□□□ -0.3
SEC11A-206ENST00000558924 ANKRD42Q8N9B4 389 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 ZNF473Q8WTR7 871 aaKnown RBP13.2□□□□□ -0.3
SEC11A-206ENST00000558924 KCNK9Q9NPC2 374 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 FZD1Q9UP38 647 aa13.2□□□□□ -0.3
SEC11A-206ENST00000558924 MSL3Q8N5Y2 521 aaKnown RBP13.19□□□□□ -0.3
SEC11A-206ENST00000558924 MASTLQ96GX5 879 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 SWAP70Q9UH65 585 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 L3MBTL1Q9Y468 752 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 A0A1W2PQC6 194 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 FAM86B1E9PN63 330 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 FSBPO95073 299 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 FAM86B2P0C5J1 330 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 LRRC14Q15048 493 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 EXOC3L4Q17RC7 722 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 CASKIN2Q8WXE0 1202 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 DYDC2Q96IM9 177 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 MTMR9Q96QG7 549 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 CRAMP1Q96RY5 1269 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 TRIM51Q9BSJ1 452 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 TMEM39BQ9GZU3 492 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 DNAJC18Q9H819 358 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 GOLGA8IPA6NC78 632 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 GOLGA8JA6NMD2 632 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 EXOC3O60645 756 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 ODR4Q5SWX8 454 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 CENPPQ6IPU0 288 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 HIBCHQ6NVY1 386 aaPredicted RBP13.19□□□□□ -0.3
SEC11A-206ENST00000558924 CYB5D1Q6P9G0 228 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 ANKS1AQ92625 1134 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 CCDC127Q96BQ5 260 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 TLR10Q9BXR5 811 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 GJA3Q9Y6H8 435 aa13.19□□□□□ -0.3
SEC11A-206ENST00000558924 ABCB11O95342 1321 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 TMEM150BA6NC51 233 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 RASSF9O75901 435 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 CAPN12Q6ZSI9 719 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 NLRP14Q86W24 1093 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 PROM2Q8N271 834 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 ZNF483Q8TF39 744 aaPredicted RBP13.18□□□□□ -0.3
SEC11A-206ENST00000558924 PDGFDQ9GZP0 370 aaPredicted RBP13.18□□□□□ -0.3
SEC11A-206ENST00000558924 DHX36Q9H2U1 1008 aaKnown RBP13.18□□□□□ -0.3
SEC11A-206ENST00000558924 CTNND1O60716 968 aaKnown RBP13.18□□□□□ -0.3
SEC11A-206ENST00000558924 EPB41P11171 864 aaKnown RBP13.18□□□□□ -0.3
SEC11A-206ENST00000558924 ITGA4P13612 1032 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 ADRA2BP18089 450 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 CYP11B2P19099 503 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 PARP9Q8IXQ6 854 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 ZCWPW1Q9H0M4 648 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 FBXL5Q9UKA1 691 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 RASSF10A6NK89 507 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 MYL1P05976 194 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
SEC11A-206ENST00000558924 COG2Q14746 738 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 SNCBQ16143 134 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 TBC1D1Q86TI0 1168 aaPredicted RBP13.18□□□□□ -0.3
SEC11A-206ENST00000558924 FAM178BQ8IXR5 827 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 RUSC1Q9BVN2 902 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 GLIS2Q9BZE0 524 aaPredicted RBP13.18□□□□□ -0.3
SEC11A-206ENST00000558924 GCNT4Q9P109 453 aa13.18□□□□□ -0.3
SEC11A-206ENST00000558924 SNED1Q8TER0 1413 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 CCDC169A6NNP5 214 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 TTI1O43156 1089 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 RTN2O75298 545 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 LGR5O75473 907 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 STAT2P52630 851 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 JAG1P78504 1218 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 MYO1EQ12965 1108 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 QPCTQ16769 361 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 HS2ST1Q7LGA3 356 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 SCFD1Q8WVM8 642 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 STAMBPL1Q96FJ0 436 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 VCPKMTQ9H867 229 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 FAM198AQ9UFP1 575 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 PVALEFA0A1B0GWK0 134 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 ZNF233A6NK53 670 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 EML1O00423 815 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 PPP1R37O75864 691 aa13.17□□□□□ -0.3
SEC11A-206ENST00000558924 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
SEC11A-206ENST00000558924 LRRC63Q05C16 580 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms