RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 NISCHQ9Y2I1 1504 aa23.76■■□□□ 1.39
SEC11A-206ENST00000558924 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
SEC11A-206ENST00000558924 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
SEC11A-206ENST00000558924 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
SEC11A-206ENST00000558924 PCGF6Q9BYE7 350 aa20.15■□□□□ 0.82
SEC11A-206ENST00000558924 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
SEC11A-206ENST00000558924 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
SEC11A-206ENST00000558924 HRCP23327 699 aa20.05■□□□□ 0.8
SEC11A-206ENST00000558924 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
SEC11A-206ENST00000558924 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
SEC11A-206ENST00000558924 FAM9AQ8IZU1 332 aaPredicted RBP19.82■□□□□ 0.76
SEC11A-206ENST00000558924 LOC105371045A0A1W2PR82 267 aa19.8■□□□□ 0.76
SEC11A-206ENST00000558924 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
SEC11A-206ENST00000558924 MYO15BQ96JP2 1530 aa19.59■□□□□ 0.73
SEC11A-206ENST00000558924 ABCC9O60706 1549 aa19.53■□□□□ 0.72
SEC11A-206ENST00000558924 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
SEC11A-206ENST00000558924 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
SEC11A-206ENST00000558924 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
SEC11A-206ENST00000558924 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
SEC11A-206ENST00000558924 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
SEC11A-206ENST00000558924 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
SEC11A-206ENST00000558924 TRIM26Q12899 539 aaPredicted RBP19.03■□□□□ 0.64
SEC11A-206ENST00000558924 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
SEC11A-206ENST00000558924 RANGAP1P46060 587 aaPredicted RBP18.98■□□□□ 0.63
SEC11A-206ENST00000558924 DCAF1Q9Y4B6 1507 aa18.93■□□□□ 0.62
SEC11A-206ENST00000558924 CECR2Q9BXF3 1484 aa18.91■□□□□ 0.62
SEC11A-206ENST00000558924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
SEC11A-206ENST00000558924 RB1CC1Q8TDY2 1594 aa18.78■□□□□ 0.6
SEC11A-206ENST00000558924 UBTFP17480 764 aaKnown RBP18.78■□□□□ 0.6
SEC11A-206ENST00000558924 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
SEC11A-206ENST00000558924 NEUROD1Q13562 356 aa18.73■□□□□ 0.59
SEC11A-206ENST00000558924 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
SEC11A-206ENST00000558924 MROH2BQ7Z745 1585 aa18.67■□□□□ 0.58
SEC11A-206ENST00000558924 GTF3C3Q9Y5Q9 886 aa18.66■□□□□ 0.58
SEC11A-206ENST00000558924 ZEB1P37275 1124 aaPredicted RBP18.64■□□□□ 0.57
SEC11A-206ENST00000558924 ACIN1Q9UKV3 1341 aaKnown RBP18.6■□□□□ 0.57
SEC11A-206ENST00000558924 MYT1Q01538 1121 aa18.6■□□□□ 0.57
SEC11A-206ENST00000558924 WIZO95785 1651 aa18.54■□□□□ 0.56
SEC11A-206ENST00000558924 NACADO15069 1562 aa18.52■□□□□ 0.56
SEC11A-206ENST00000558924 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
SEC11A-206ENST00000558924 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
SEC11A-206ENST00000558924 APLP2Q06481 763 aa18.37■□□□□ 0.53
SEC11A-206ENST00000558924 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
SEC11A-206ENST00000558924 CENPBP07199 599 aaPredicted RBP18.34■□□□□ 0.53
SEC11A-206ENST00000558924 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
SEC11A-206ENST00000558924 SOGA1O94964 1423 aa18.28■□□□□ 0.52
SEC11A-206ENST00000558924 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.52
SEC11A-206ENST00000558924 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
SEC11A-206ENST00000558924 ITGAEP38570 1179 aa18.19■□□□□ 0.5
SEC11A-206ENST00000558924 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
SEC11A-206ENST00000558924 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
SEC11A-206ENST00000558924 CEP162Q5TB80 1403 aa18.1■□□□□ 0.49
SEC11A-206ENST00000558924 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
SEC11A-206ENST00000558924 WRNQ14191 1432 aaPredicted RBP eCLIP18.02■□□□□ 0.48
SEC11A-206ENST00000558924 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
SEC11A-206ENST00000558924 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
SEC11A-206ENST00000558924 SMARCA2P51531 1590 aa17.95■□□□□ 0.46
SEC11A-206ENST00000558924 P3H3Q8IVL6 736 aa17.95■□□□□ 0.46
SEC11A-206ENST00000558924 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
SEC11A-206ENST00000558924 MIER1Q8N108 512 aa17.91■□□□□ 0.46
SEC11A-206ENST00000558924 ZNF316A6NFI3 1004 aaPredicted RBP17.89■□□□□ 0.45
SEC11A-206ENST00000558924 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
SEC11A-206ENST00000558924 UNC13AQ9UPW8 1703 aa17.87■□□□□ 0.45
SEC11A-206ENST00000558924 CLIP1P30622 1438 aa17.86■□□□□ 0.45
SEC11A-206ENST00000558924 GOLGA3Q08378 1498 aa17.83■□□□□ 0.44
SEC11A-206ENST00000558924 BCANQ96GW7 911 aa17.8■□□□□ 0.44
SEC11A-206ENST00000558924 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
SEC11A-206ENST00000558924 BICRAQ9NZM4 1560 aa17.78■□□□□ 0.44
SEC11A-206ENST00000558924 RAPGEF2Q9Y4G8 1499 aa17.73■□□□□ 0.43
SEC11A-206ENST00000558924 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
SEC11A-206ENST00000558924 KANK4Q5T7N3 995 aaPredicted RBP17.71■□□□□ 0.42
SEC11A-206ENST00000558924 EEA1Q15075 1411 aa17.7■□□□□ 0.42
SEC11A-206ENST00000558924 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
SEC11A-206ENST00000558924 ARID3CA6NKF2 412 aa17.67■□□□□ 0.42
SEC11A-206ENST00000558924 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
SEC11A-206ENST00000558924 ANP32EQ9BTT0 268 aa17.66■□□□□ 0.42
SEC11A-206ENST00000558924 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
SEC11A-206ENST00000558924 TSHZ2Q9NRE2 1034 aa17.58■□□□□ 0.41
SEC11A-206ENST00000558924 SUPT16HQ9Y5B9 1047 aaKnown RBP17.56■□□□□ 0.4
SEC11A-206ENST00000558924 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
SEC11A-206ENST00000558924 HIRIP3Q9BW71 556 aaPredicted RBP17.53■□□□□ 0.4
SEC11A-206ENST00000558924 KIF27Q86VH2 1401 aa17.48■□□□□ 0.39
SEC11A-206ENST00000558924 CUX2O14529 1486 aa17.46■□□□□ 0.39
SEC11A-206ENST00000558924 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
SEC11A-206ENST00000558924 CNGB1Q14028 1251 aaPredicted RBP17.46■□□□□ 0.39
SEC11A-206ENST00000558924 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
SEC11A-206ENST00000558924 SIN3AQ96ST3 1273 aa17.39■□□□□ 0.37
SEC11A-206ENST00000558924 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
SEC11A-206ENST00000558924 KIF21BO75037 1637 aa17.36■□□□□ 0.37
SEC11A-206ENST00000558924 CARMIL1Q5VZK9 1371 aa17.35■□□□□ 0.37
SEC11A-206ENST00000558924 DDX10Q13206 875 aaKnown RBP17.34■□□□□ 0.37
SEC11A-206ENST00000558924 FKBP8Q14318 412 aa17.34■□□□□ 0.37
SEC11A-206ENST00000558924 TRIM52Q96A61 297 aa17.34■□□□□ 0.37
SEC11A-206ENST00000558924 CHIC2Q9UKJ5 165 aa17.34■□□□□ 0.37
SEC11A-206ENST00000558924 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
SEC11A-206ENST00000558924 CUX1P39880 1505 aa17.31■□□□□ 0.36
SEC11A-206ENST00000558924 NEFLP07196 543 aa17.3■□□□□ 0.36
SEC11A-206ENST00000558924 FBLN2P98095 1184 aa17.29■□□□□ 0.36
SEC11A-206ENST00000558924 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
SEC11A-206ENST00000558924 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms