RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 POTEBQ6S5H4 581 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 HEATR3Q7Z4Q2 680 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 SUGP1Q8IWZ8 645 aaKnown RBP12.46□□□□□ -0.41
CHGA-205ENST00000556098 IL31RAQ8NI17 732 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 TUT1Q9H6E5 874 aaKnown RBP12.46□□□□□ -0.41
CHGA-205ENST00000556098 SETD4Q9NVD3 440 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 CD207Q9UJ71 328 aa12.46□□□□□ -0.41
CHGA-205ENST00000556098 COL4A6Q14031 1691 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 TECTAO75443 2155 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 NR1I2O75469 434 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 LGALS2P05162 132 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 GHRP10912 638 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 CCND2P30279 289 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 PRPHP41219 470 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 TOB1P50616 345 aaPredicted RBP12.45□□□□□ -0.42
CHGA-205ENST00000556098 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
CHGA-205ENST00000556098 BTG3Q14201 252 aaPredicted RBP12.45□□□□□ -0.42
CHGA-205ENST00000556098 PGM5Q15124 567 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 PAN2Q504Q3 1202 aaKnown RBP12.45□□□□□ -0.42
CHGA-205ENST00000556098 TRIM50Q86XT4 487 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 FMR1NBQ8N0W7 255 aaPredicted RBP12.45□□□□□ -0.42
CHGA-205ENST00000556098 REXO1Q8N1G1 1221 aaKnown RBP12.45□□□□□ -0.42
CHGA-205ENST00000556098 PRSS33Q8NF86 280 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 EMID1Q96A84 441 aaPredicted RBP12.45□□□□□ -0.42
CHGA-205ENST00000556098 PBXIP1Q96AQ6 731 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 PDCD2LQ9BRP1 358 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 C11orf84Q9BUA3 381 aaPredicted RBP12.45□□□□□ -0.42
CHGA-205ENST00000556098 KCNH6Q9H252 994 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 RNPEPQ9H4A4 650 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 ALG13Q9NP73 1137 aaKnown RBP12.45□□□□□ -0.42
CHGA-205ENST00000556098 HPSEQ9Y251 543 aa12.45□□□□□ -0.42
CHGA-205ENST00000556098 PLXNA3P51805 1871 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 ADGRA3Q8IWK6 1321 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 TTC3P53804 2025 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 TMEM221A6NGB7 291 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 C19orf67A6NJJ6 358 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 M0R296 226 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 TBX10O75333 385 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 PPFIA4O75335 1185 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 LTBRP36941 435 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 SYKP43405 635 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 ADCY7P51828 1080 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 SP2Q02086 613 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 SNW1Q13573 536 aaKnown RBP12.44□□□□□ -0.42
CHGA-205ENST00000556098 NONOQ15233 471 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHGA-205ENST00000556098 SMAD2Q15796 467 aaKnown RBP12.44□□□□□ -0.42
CHGA-205ENST00000556098 IER5LQ5T953 404 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 KCNV1Q6PIU1 500 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 SASS6Q6UVJ0 657 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 RBM23Q86U06 439 aaKnown RBP12.44□□□□□ -0.42
CHGA-205ENST00000556098 OXER1Q8TDS5 423 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 PIBF1Q8WXW3 757 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 CUL5Q93034 780 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 C16orf70Q9BSU1 422 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 FUCA2Q9BTY2 467 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 AMNQ9BXJ7 453 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 BCAS3Q9H6U6 928 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 JMJD4Q9H9V9 463 aa12.44□□□□□ -0.42
CHGA-205ENST00000556098 SMCO2A6NFE2 343 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 RGS20O76081 388 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 GNAT1P11488 350 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 PFKFB1P16118 471 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 PTPN5P54829 565 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 AP3B2Q13367 1082 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 SMAD4Q13485 552 aaKnown RBP12.43□□□□□ -0.42
CHGA-205ENST00000556098 ZRSR1Q15695 479 aaKnown RBP12.43□□□□□ -0.42
CHGA-205ENST00000556098 SLC35G1Q2M3R5 365 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 PIK3AP1Q6ZUJ8 805 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 CYFIP1Q7L576 1253 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 GAS2L3Q86XJ1 694 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 APBB2Q92870 758 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 PIGSQ96S52 555 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 RIC8AQ9NPQ8 531 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 FBXO2Q9UK22 296 aaPredicted RBP12.43□□□□□ -0.42
CHGA-205ENST00000556098 PCDHA6Q9UN73 950 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 PCDHA8Q9Y5H6 950 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 PCDHA1Q9Y5I3 950 aa12.43□□□□□ -0.42
CHGA-205ENST00000556098 hCG_1642624A0A1W2PR95 340 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 NCK2O43639 380 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 ZNF202O95125 648 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHGA-205ENST00000556098 GCFC2P16383 781 aaKnown RBP12.42□□□□□ -0.42
CHGA-205ENST00000556098 MARK3P27448 753 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 LONP1P36776 959 aaKnown RBP12.42□□□□□ -0.42
CHGA-205ENST00000556098 BMPR1AP36894 532 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 TXLNAP40222 546 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 HSD17B4P51659 736 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 CCDC173Q0VFZ6 552 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 SEMA3FQ13275 785 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 STX1AQ16623 288 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 SPOUT1Q5T280 376 aaKnown RBP12.42□□□□□ -0.42
CHGA-205ENST00000556098 NEK8Q86SG6 692 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 FAM200AQ8TCP9 573 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 EDAQ92838 391 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 RPGRIP1Q96KN7 1286 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 AK8Q96MA6 479 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 SDF4Q9BRK5 362 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 NAT10Q9H0A0 1025 aaKnown RBP12.42□□□□□ -0.42
CHGA-205ENST00000556098 LMAN2LQ9H0V9 348 aa12.42□□□□□ -0.42
CHGA-205ENST00000556098 GOLPH3LQ9H4A5 285 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms