RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 MAP4K3Q8IVH8 894 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 MB21D2Q8IYB1 491 aaPredicted RBP8.18□□□□□ -1.1
YBX3-206ENST00000536823 ADGRF4Q8IZF3 695 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 KLHDC9Q8NEP7 349 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 NCOA7Q8NI08 942 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 MORC4Q8TE76 937 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 MAF1Q9H063 256 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 C7orf69Q9H7B7 122 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 VTA1Q9NP79 307 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 ATP11BQ9Y2G3 1177 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 LTBP2Q14767 1821 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 ERICH2A1L162 156 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 MYADML2A6NDP7 307 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 KLRF2D3W0D1 207 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 C6orf222P0C671 652 aaPredicted RBP8.17□□□□□ -1.1
YBX3-206ENST00000536823 RARAP10276 462 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 IGFBP4P22692 258 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 TARSP26639 723 aaKnown RBP8.17□□□□□ -1.1
YBX3-206ENST00000536823 GRNP28799 593 aaKnown RBP8.17□□□□□ -1.1
YBX3-206ENST00000536823 BMP8BP34820 402 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 GJA9P57773 515 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 RPS6P62753 249 aaKnown RBP8.17□□□□□ -1.1
YBX3-206ENST00000536823 NKX3-2P78367 333 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 GRM4Q14833 912 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 WTAPQ15007 396 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 SETDB1Q15047 1291 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 QRICH1Q2TAL8 776 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 USH1GQ495M9 461 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 TRIM60Q495X7 471 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 TMEM67Q5HYA8 995 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 RNF43Q68DV7 783 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 CCSAPQ6IQ19 270 aaPredicted RBP8.17□□□□□ -1.1
YBX3-206ENST00000536823 GDF6Q6KF10 455 aaPredicted RBP8.17□□□□□ -1.1
YBX3-206ENST00000536823 RNF207Q6ZRF8 634 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 FBXO16Q8IX29 292 aaPredicted RBP8.17□□□□□ -1.1
YBX3-206ENST00000536823 ABI1Q8IZP0 508 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 STAG2Q8N3U4 1231 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 POU5F2Q8N7G0 328 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 RGS22Q8NE09 1264 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 FERMT2Q96AC1 680 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 MTMR8Q96EF0 704 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 CCDC136Q96JN2 1154 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 HINFPQ9BQA5 517 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 JMJD4Q9H9V9 463 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 SPC25Q9HBM1 224 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 ANO2Q9NQ90 1003 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 PDLIM7Q9NR12 457 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 ADD3Q9UEY8 706 aaKnown RBP8.17□□□□□ -1.1
YBX3-206ENST00000536823 MAD2L2Q9UI95 211 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 DDX49Q9Y6V7 483 aaKnown RBP8.17□□□□□ -1.1
YBX3-206ENST00000536823 ABCB11O95342 1321 aa8.17□□□□□ -1.1
YBX3-206ENST00000536823 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.16□□□□□ -1.1
YBX3-206ENST00000536823 SLC27A2O14975 620 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 CTAGE5O15320 804 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 DHX16O60231 1041 aaKnown RBP8.16□□□□□ -1.1
YBX3-206ENST00000536823 PRMT3O60678 531 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 CDC45O75419 566 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 EDNRBP24530 442 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 CALML3P27482 149 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 ACLYP53396 1101 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 TNFAIP2Q03169 654 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 KCNA10Q16322 511 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 SLC35G1Q2M3R5 365 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 CREB3L3Q68CJ9 461 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 TAPT1Q6NXT6 567 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 TLK2Q86UE8 772 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 IL22RA1Q8N6P7 574 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 PCSK9Q8NBP7 692 aaKnown RBP8.16□□□□□ -1.1
YBX3-206ENST00000536823 DNERQ8NFT8 737 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 IGDCC4Q8TDY8 1250 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 NUP133Q8WUM0 1156 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 UTP4Q969X6 686 aaKnown RBP8.16□□□□□ -1.1
YBX3-206ENST00000536823 IFT43Q96FT9 208 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 MTA3Q9BTC8 594 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 CEP41Q9BYV8 373 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 LY9Q9HBG7 655 aa8.16□□□□□ -1.1
YBX3-206ENST00000536823 MRPL11Q9Y3B7 192 aaKnown RBP8.16□□□□□ -1.1
YBX3-206ENST00000536823 ELP1O95163 1332 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 RBM47A0AV96 593 aaKnown RBP8.15□□□□□ -1.1
YBX3-206ENST00000536823 HMX2A2RU54 273 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 SH2B2O14492 632 aaPredicted RBP8.15□□□□□ -1.1
YBX3-206ENST00000536823 ZBTB5O15062 677 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 PRC1O43663 620 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 PPP1R11O60927 126 aaPredicted RBP8.15□□□□□ -1.1
YBX3-206ENST00000536823 DDAH1O94760 285 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 NEFLP07196 543 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 ASGR1P07306 291 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 MCM5P33992 734 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 GHRHRQ02643 423 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 TLE2Q04725 743 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 TROAPQ12815 778 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 NECTIN1Q15223 517 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 UVSSAQ2YD98 709 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 IQSEC1Q6DN90 963 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 CASC1Q6TDU7 716 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 NOL8Q76FK4 1167 aaKnown RBP8.15□□□□□ -1.1
YBX3-206ENST00000536823 EEPD1Q7L9B9 569 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 CHST3Q7LGC8 479 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 CATIPQ7Z7H3 387 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms