RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PCDHGA2Q9Y5H1 932 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 FANCMQ8IYD8 2048 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 M0QZ92 97 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 SLC30A4O14863 429 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 RPLP2P05387 115 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 TGFB3P10600 412 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 TOP1P11387 765 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 PPM1AP35813 382 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 ADAM17P78536 824 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 KRT17Q04695 432 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 BMS1Q14692 1282 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 ZNF528Q3MIS6 628 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 SND1Q7KZF4 910 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 RTN4RL1Q86UN2 441 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 TRIM50Q86XT4 487 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 TRMT2AQ8IZ69 625 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 C12orf76Q8N812 135 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 ANKK1Q8NFD2 765 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 DDX1Q92499 740 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 TBC1D5Q92609 795 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 OSBP2Q969R2 916 aa11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 TYW1Q9NV66 732 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-213ENST00000496037 LAMTOR5O43504 91 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 PROS1P07225 676 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 PDHBP11177 359 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 SARSP49591 514 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 MRPS6P82932 125 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 SP2Q02086 613 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 ZNF543Q08ER8 600 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 UTP14CQ5TAP6 766 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 IER5Q5VY09 327 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 PHLDB3Q6NSJ2 640 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 THSD4Q6ZMP0 1018 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 ITPRIPQ8IWB1 547 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 FTSJ3Q8IY81 847 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 DNAJB3Q8WWF6 145 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 ARHGEF3Q9NR81 526 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 SPATA6Q9NWH7 488 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 DLGAP2Q9P1A6 1054 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 TUBE1Q9UJT0 475 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 SQORQ9Y6N5 450 aa11.15□□□□□ -0.62
SMARCAL1-213ENST00000496037 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 CLASP2O75122 1294 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 CFBP00751 764 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 NOVP48745 357 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 PPFIA1Q13136 1202 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 PTGDRQ13258 359 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 CDC37Q16543 378 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 ZKSCAN2Q63HK3 967 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 TMC5Q6UXY8 1006 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 MRPL43Q8N983 215 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 ZFRQ96KR1 1074 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 PDCD2LQ9BRP1 358 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 EPC1Q9H2F5 836 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 FBXO4Q9UKT5 387 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 PADI3Q9ULW8 664 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 MRPL11Q9Y3B7 192 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 ZFYVE26Q68DK2 2539 aa11.14□□□□□ -0.63
SMARCAL1-213ENST00000496037 C2orf71A6NGG8 1288 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 M0R2C6 588 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 ZFYP08048 801 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 SRFP11831 508 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 PMLP29590 882 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 SHC2P98077 582 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 METTL7BQ6UX53 244 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 CABP7Q86V35 215 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 MAML2Q8IZL2 1156 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 PJA1Q8NG27 643 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 ZNF558Q96NG5 402 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 BCO2Q9BYV7 579 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 SFXN1Q9H9B4 322 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 PARD6AQ9NPB6 346 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 ZSCAN32Q9NX65 697 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 RAB23Q9ULC3 237 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 ZMIZ1Q9ULJ6 1067 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 TRPV2Q9Y5S1 764 aa11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-213ENST00000496037 DENND4AQ7Z401 1863 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 DENND3A2RUS2 1198 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 RNF113AO15541 343 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 TBC1D4O60343 1298 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 TGM1P22735 817 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 CCND2P30279 289 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 CSTF1Q05048 431 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 SPEM2Q0P670 501 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 NFX1Q12986 1120 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 NEDD9Q14511 834 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 GRIK4Q16099 956 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 GPATCH4Q5T3I0 446 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 FAM102BQ5T8I3 360 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 KANK3Q6NY19 840 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 KCNT2Q6UVM3 1135 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 KBTBD3Q8NAB2 608 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 GPR152Q8TDT2 470 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 GLG1Q92896 1179 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms