RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 U2AF2P26368 475 aaKnown RBP eCLIP9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 KRT2P35908 639 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 PPP2R5CQ13362 524 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 ORC2Q13416 577 aaPredicted RBP9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 PLCB4Q15147 1175 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 SHHQ15465 462 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 INF2Q27J81 1249 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 PRR16Q569H4 304 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 PSRC1Q6PGN9 363 aaPredicted RBP9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 DIS3L2Q8IYB7 885 aaKnown RBP9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 C7orf31Q8N865 590 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 HERVK_113Q902F9 699 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 HAS1Q92839 578 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 NAP1L4Q99733 375 aaKnown RBP9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 LBHD1Q9BQE6 289 aaPredicted RBP9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 ZNF577Q9BSK1 485 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 FOXP1Q9H334 677 aaPredicted RBP9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 SMARCAD1Q9H4L7 1026 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 REV3LO60673 3130 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 C17orf102A2RUQ5 167 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 BTBD18B2RXH4 712 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 TREHO43280 583 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 ZNF862O60290 1169 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 NBNO60934 754 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 GADD45BO75293 160 aaPredicted RBP9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 ADCY5O95622 1261 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 CKBP12277 381 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 SELPP16109 830 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 ZNF200P98182 395 aaPredicted RBP9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 BFSP2Q13515 415 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 GRIK4Q16099 956 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 TCTN1Q2MV58 587 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 LRRC8DQ7L1W4 858 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 TMEM199Q8N511 208 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 CCDC155Q8N6L0 562 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 KRI1Q8N9T8 703 aaKnown RBP9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 ATP8B4Q8TF62 1192 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 FAM20AQ96MK3 541 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 MTMR9Q96QG7 549 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 PPP1R12CQ9BZL4 782 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 UNC45AQ9H3U1 944 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 ZSCAN16Q9H4T2 348 aaPredicted RBP9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 DDX19AQ9NUU7 478 aaKnown RBP9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 PKD2L1Q9P0L9 805 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 RABGEF1Q9UJ41 708 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 KDM3AQ9Y4C1 1321 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 TTC3P53804 2025 aa9.44□□□□□ -0.9
GPATCH4-207ENST00000494414 CCDC194A0A1B0GVG4 234 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 KIF28PB7ZC32 967 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 GPR37O15354 613 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 RPLP2P05387 115 aaKnown RBP9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 SFNP31947 248 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 STAT5BP51692 787 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 JAK3P52333 1124 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 SMAD3P84022 425 aaKnown RBP9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 PPFIA1Q13136 1202 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 DHX8Q14562 1220 aaKnown RBP9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 NOLC1Q14978 699 aaKnown RBP eCLIP9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 TARBP2Q15633 366 aaKnown RBP9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 UGCGQ16739 394 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 FAM47CQ5HY64 1035 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 LRCH2Q5VUJ6 765 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 FAM109BQ6ICB4 259 aaPredicted RBP9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 TAF2Q6P1X5 1199 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 PIK3AP1Q6ZUJ8 805 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 VTI1AQ96AJ9 217 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 SCLYQ96I15 445 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 DDX25Q9UHL0 483 aaKnown RBP9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 CFAP45Q9UL16 551 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 MTMR6Q9Y217 621 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 PCDHA2Q9Y5H9 948 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 PCDHA10Q9Y5I2 948 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 COL6A3P12111 3177 aa9.43□□□□□ -0.9
GPATCH4-207ENST00000494414 EYSQ5T1H1 3165 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 FNDC1Q4ZHG4 1894 aaPredicted RBP9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 TMEM265A0A087WTH1 108 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 VPS37CA5D8V6 355 aaPredicted RBP9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 RRN3P2A6NIE6 340 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 GOLGA8CPA6NN73 597 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 BAIAP3O94812 1187 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 C22orf31O95567 290 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 GNAT1P11488 350 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 INSRRP14616 1297 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 ZNF76P36508 570 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 TRAPPC10P48553 1259 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 CCL23P55773 120 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 PLEKHG4Q58EX7 1191 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 ZNF618Q5T7W0 954 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 UTP14CQ5TAP6 766 aaKnown RBP9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 RUFY4Q6ZNE9 571 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 ZNF365Q70YC5 407 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 C4orf32Q8N8J7 132 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 MYRIPQ8NFW9 859 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 FAM200AQ8TCP9 573 aa9.42□□□□□ -0.9
GPATCH4-207ENST00000494414 ATP6V0A1Q93050 837 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms