RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 SSRP1Q08945 709 aaKnown RBP10.22□□□□□ -0.77
COL8A1-207ENST00000483969 CCDC144BQ3MJ40 725 aa10.22□□□□□ -0.77
COL8A1-207ENST00000483969 NOL8Q76FK4 1167 aaKnown RBP10.22□□□□□ -0.77
COL8A1-207ENST00000483969 RNF180Q86T96 592 aa10.22□□□□□ -0.77
COL8A1-207ENST00000483969 FAM35AQ86V20 835 aa10.22□□□□□ -0.77
COL8A1-207ENST00000483969 CCDC12Q8WUD4 166 aaPredicted RBP10.22□□□□□ -0.77
COL8A1-207ENST00000483969 RNF26Q9BY78 433 aaPredicted RBP10.22□□□□□ -0.77
COL8A1-207ENST00000483969 XPNPEP3Q9NQH7 507 aa10.22□□□□□ -0.77
COL8A1-207ENST00000483969 RLFQ13129 1914 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 SMCO2A6NFE2 343 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 KBTBD13C9JR72 458 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 PFKFB2O60825 505 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 SCG2P13521 617 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 EDNRBP24530 442 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 NAPAP54920 295 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 STK3Q13188 491 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 NTRK3Q16288 839 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 PFKFB3Q16875 520 aaPredicted RBP10.21□□□□□ -0.77
COL8A1-207ENST00000483969 ANO1Q5XXA6 986 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 MCTP2Q6DN12 878 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 TAPT1Q6NXT6 567 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 SHISA2Q6UWI4 295 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 EEPD1Q7L9B9 569 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 SHISA4Q96DD7 197 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 PAWRQ96IZ0 340 aaKnown RBP10.21□□□□□ -0.77
COL8A1-207ENST00000483969 HTATIP2Q9BUP3 242 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 SLC26A6Q9BXS9 759 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 KATNBL1Q9H079 304 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 AP5M1Q9H0R1 490 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 EHMT1Q9H9B1 1298 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 NCOA5Q9HCD5 579 aaKnown RBP10.21□□□□□ -0.77
COL8A1-207ENST00000483969 PXMP2Q9NR77 195 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 BARHL2Q9NY43 387 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 COL20A1Q9P218 1284 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 TPCN1Q9ULQ1 816 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 Q9Y3F1 56 aa10.21□□□□□ -0.77
COL8A1-207ENST00000483969 NID2Q14112 1375 aa10.21□□□□□ -0.78
COL8A1-207ENST00000483969 RBM47A0AV96 593 aaKnown RBP10.2□□□□□ -0.78
COL8A1-207ENST00000483969 DNM1LO00429 736 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 ASTN1O14525 1302 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 MEIS2O14770 477 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 NKRFO15226 690 aaKnown RBP eCLIP10.2□□□□□ -0.78
COL8A1-207ENST00000483969 STAM2O75886 525 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 FOSP01100 380 aaPredicted RBP10.2□□□□□ -0.78
COL8A1-207ENST00000483969 MYCLP12524 364 aaPredicted RBP10.2□□□□□ -0.78
COL8A1-207ENST00000483969 EIF2AK2P19525 551 aaKnown RBP10.2□□□□□ -0.78
COL8A1-207ENST00000483969 GRNP28799 593 aaKnown RBP10.2□□□□□ -0.78
COL8A1-207ENST00000483969 GNA11P29992 359 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 CCND2P30279 289 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 ADCYAP1R1P41586 468 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 TTLL4Q14679 1199 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 RABEP1Q15276 862 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 ARTNQ5T4W7 220 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 WWC2Q6AWC2 1192 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 XRRA1Q6P2D8 792 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 KCNV1Q6PIU1 500 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 USP17L6PQ6QN14 398 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 VSIG10LQ86VR7 867 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 DMRTC2Q8IXT2 367 aaPredicted RBP10.2□□□□□ -0.78
COL8A1-207ENST00000483969 SCFD2Q8WU76 684 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 PHKBQ93100 1093 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 ZSCAN31Q96LW9 406 aaPredicted RBP10.2□□□□□ -0.78
COL8A1-207ENST00000483969 PDCD2LQ9BRP1 358 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 WDR11Q9BZH6 1224 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 C11orf49Q9H6J7 331 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 C6orf50Q9HD87 102 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 ZFP64Q9NPA5 681 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 RIC8AQ9NPQ8 531 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 KLK14Q9P0G3 267 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
COL8A1-207ENST00000483969 MYH4Q9Y623 1939 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 ZSWIM8A7E2V4 1837 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 STXBP3O00186 592 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 DYNC1LI2O43237 492 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-207ENST00000483969 ZEB2O60315 1214 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 DEXIO95424 95 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 TXNP10599 105 aaKnown RBP10.19□□□□□ -0.78
COL8A1-207ENST00000483969 CPB1P15086 417 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 XBP1P17861 261 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 ADCY7P51828 1080 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 GJA9P57773 515 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 GPLD1P80108 840 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 SCRN1Q12765 414 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 PGM5Q15124 567 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 LRRC41Q15345 812 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 PKN1Q16512 942 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 DUSP28Q4G0W2 176 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 BRDTQ58F21 947 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-207ENST00000483969 GJC2Q5T442 439 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-207ENST00000483969 SEPT14Q6ZU15 432 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 UBE2Q1Q7Z7E8 422 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 FBXO16Q8IX29 292 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-207ENST00000483969 FAM177A1Q8N128 213 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-207ENST00000483969 PCSK9Q8NBP7 692 aaKnown RBP10.19□□□□□ -0.78
COL8A1-207ENST00000483969 CCDC148Q8NFR7 591 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 BICD2Q8TD16 824 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 VTI1AQ96AJ9 217 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 PSMG3-AS1Q96PY0 264 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 LPIN3Q9BQK8 851 aa10.19□□□□□ -0.78
COL8A1-207ENST00000483969 BACH2Q9BYV9 841 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms