RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 AEBP2Q6ZN18 517 aaPredicted RBP33.97■■■■□ 3.03
COL8A1-207ENST00000483969 CHIC1Q5VXU3 224 aa32.43■■■□□ 2.78
COL8A1-207ENST00000483969 SENP3Q9H4L4 574 aaPredicted RBP29.1■■■□□ 2.25
COL8A1-207ENST00000483969 PHF23Q9BUL5 403 aaPredicted RBP28.63■■■□□ 2.17
COL8A1-207ENST00000483969 FOXD1Q16676 465 aa27.01■■□□□ 1.91
COL8A1-207ENST00000483969 PLPPR3Q6T4P5 718 aa26■■□□□ 1.75
COL8A1-207ENST00000483969 MSH5O43196 834 aa25.36■■□□□ 1.65
COL8A1-207ENST00000483969 PIAS4Q8N2W9 510 aaPredicted RBP25.32■■□□□ 1.64
COL8A1-207ENST00000483969 PPP6R1Q9UPN7 881 aa25.25■■□□□ 1.63
COL8A1-207ENST00000483969 ADRA2BP18089 450 aa25.2■■□□□ 1.62
COL8A1-207ENST00000483969 POTEDQ86YR6 584 aa24.49■■□□□ 1.51
COL8A1-207ENST00000483969 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
COL8A1-207ENST00000483969 MAPK8IP2Q13387 824 aaPredicted RBP23.08■■□□□ 1.29
COL8A1-207ENST00000483969 DMRT2Q9Y5R5 561 aa23.06■■□□□ 1.28
COL8A1-207ENST00000483969 PPP4R3CPQ6ZMV5 832 aa22.74■■□□□ 1.23
COL8A1-207ENST00000483969 CNKSR2Q8WXI2 1034 aa22.35■■□□□ 1.17
COL8A1-207ENST00000483969 HOXD11P31277 338 aaPredicted RBP22.24■■□□□ 1.15
COL8A1-207ENST00000483969 RNF216Q9NWF9 866 aaPredicted RBP22.12■■□□□ 1.13
COL8A1-207ENST00000483969 DCAF8L1A6NGE4 600 aa22.07■■□□□ 1.12
COL8A1-207ENST00000483969 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
COL8A1-207ENST00000483969 CACNB1Q02641 598 aaPredicted RBP21.63■■□□□ 1.05
COL8A1-207ENST00000483969 RNF39Q9H2S5 420 aa21.59■■□□□ 1.05
COL8A1-207ENST00000483969 NPM3O75607 178 aaKnown RBP21.57■■□□□ 1.04
COL8A1-207ENST00000483969 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
COL8A1-207ENST00000483969 C1QBPQ07021 282 aaKnown RBP21.32■■□□□ 1
COL8A1-207ENST00000483969 KCNA4P22459 653 aa21.22■□□□□ 0.99
COL8A1-207ENST00000483969 NISCHQ9Y2I1 1504 aa21.19■□□□□ 0.98
COL8A1-207ENST00000483969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.19■□□□□ 0.98
COL8A1-207ENST00000483969 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
COL8A1-207ENST00000483969 SLC4A2P04920 1241 aa20.55■□□□□ 0.88
COL8A1-207ENST00000483969 CAPN15O75808 1086 aa20.38■□□□□ 0.85
COL8A1-207ENST00000483969 SPINK5Q9NQ38 1064 aaPredicted RBP20.36■□□□□ 0.85
COL8A1-207ENST00000483969 APLP2Q06481 763 aa20.33■□□□□ 0.85
COL8A1-207ENST00000483969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
COL8A1-207ENST00000483969 HNRNPUL2Q1KMD3 747 aaKnown RBP20.3■□□□□ 0.84
COL8A1-207ENST00000483969 DSG3P32926 999 aa20.23■□□□□ 0.83
COL8A1-207ENST00000483969 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
COL8A1-207ENST00000483969 ZNF219Q9P2Y4 722 aaPredicted RBP20.12■□□□□ 0.81
COL8A1-207ENST00000483969 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
COL8A1-207ENST00000483969 TRHP20396 242 aaPredicted RBP20.05■□□□□ 0.8
COL8A1-207ENST00000483969 MYCNP04198 464 aaPredicted RBP20.03■□□□□ 0.8
COL8A1-207ENST00000483969 ABCB7O75027 752 aa19.88■□□□□ 0.77
COL8A1-207ENST00000483969 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
COL8A1-207ENST00000483969 POLA2Q14181 598 aa19.53■□□□□ 0.72
COL8A1-207ENST00000483969 ZBTB22O15209 634 aa19.48■□□□□ 0.71
COL8A1-207ENST00000483969 RBM42Q9BTD8 480 aaKnown RBP19.41■□□□□ 0.7
COL8A1-207ENST00000483969 ATF5Q9Y2D1 282 aaPredicted RBP19.41■□□□□ 0.7
COL8A1-207ENST00000483969 ZBTB12Q9Y330 459 aaPredicted RBP19.29■□□□□ 0.68
COL8A1-207ENST00000483969 ATXN8OSP0DMR3 200 aa19.27■□□□□ 0.68
COL8A1-207ENST00000483969 POTEHQ6S545 545 aa19.24■□□□□ 0.67
COL8A1-207ENST00000483969 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
COL8A1-207ENST00000483969 AKT1S1Q96B36 256 aa18.93■□□□□ 0.62
COL8A1-207ENST00000483969 CHRDL2Q6WN34 429 aa18.87■□□□□ 0.61
COL8A1-207ENST00000483969 FBLN2P98095 1184 aa18.81■□□□□ 0.6
COL8A1-207ENST00000483969 REM2Q8IYK8 340 aaPredicted RBP18.7■□□□□ 0.58
COL8A1-207ENST00000483969 CCDC180Q9P1Z9 1646 aa18.7■□□□□ 0.58
COL8A1-207ENST00000483969 CSRNP3Q8WYN3 585 aa18.67■□□□□ 0.58
COL8A1-207ENST00000483969 SPDYE2BA6NHP3 402 aa18.65■□□□□ 0.58
COL8A1-207ENST00000483969 SPDYE6P0CI01 402 aa18.65■□□□□ 0.58
COL8A1-207ENST00000483969 SPDYE2Q495Y8 402 aa18.65■□□□□ 0.58
COL8A1-207ENST00000483969 MKRN4PQ13434 485 aaPredicted RBP18.56■□□□□ 0.56
COL8A1-207ENST00000483969 PITPNM1O00562 1244 aa18.51■□□□□ 0.55
COL8A1-207ENST00000483969 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
COL8A1-207ENST00000483969 PIP4P2Q8N4L2 257 aa18.42■□□□□ 0.54
COL8A1-207ENST00000483969 ABCC9O60706 1549 aa18.4■□□□□ 0.54
COL8A1-207ENST00000483969 SSUH2Q9Y2M2 353 aa18.38■□□□□ 0.53
COL8A1-207ENST00000483969 ZNF692Q9BU19 519 aaPredicted RBP18.37■□□□□ 0.53
COL8A1-207ENST00000483969 FXR2P51116 673 aaKnown RBP eCLIP18.33■□□□□ 0.52
COL8A1-207ENST00000483969 SPDYE1Q8NFV5 336 aaPredicted RBP18.29■□□□□ 0.52
COL8A1-207ENST00000483969 CLEC11AQ9Y240 323 aa18.19■□□□□ 0.5
COL8A1-207ENST00000483969 PABPN1Q86U42 306 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL8A1-207ENST00000483969 SP7Q8TDD2 431 aaPredicted RBP18.1■□□□□ 0.49
COL8A1-207ENST00000483969 HAX1O00165 279 aa18.05■□□□□ 0.48
COL8A1-207ENST00000483969 PRKAR2AP13861 404 aaKnown RBP18.03■□□□□ 0.48
COL8A1-207ENST00000483969 PRR29P0C7W0 189 aa17.93■□□□□ 0.46
COL8A1-207ENST00000483969 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
COL8A1-207ENST00000483969 SPDYE4A6NLX3 237 aa17.79■□□□□ 0.44
COL8A1-207ENST00000483969 CHADLQ6NUI6 762 aa17.79■□□□□ 0.44
COL8A1-207ENST00000483969 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
COL8A1-207ENST00000483969 EVX2Q03828 476 aa17.74■□□□□ 0.43
COL8A1-207ENST00000483969 STAG3Q9UJ98 1225 aa17.71■□□□□ 0.43
COL8A1-207ENST00000483969 NACADO15069 1562 aa17.69■□□□□ 0.42
COL8A1-207ENST00000483969 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
COL8A1-207ENST00000483969 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
COL8A1-207ENST00000483969 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
COL8A1-207ENST00000483969 FARP1Q9Y4F1 1045 aaPredicted RBP17.6■□□□□ 0.41
COL8A1-207ENST00000483969 DCAF1Q9Y4B6 1507 aa17.54■□□□□ 0.4
COL8A1-207ENST00000483969 CD44P16070 742 aaKnown RBP17.49■□□□□ 0.39
COL8A1-207ENST00000483969 CREBZFQ9NS37 354 aa17.47■□□□□ 0.39
COL8A1-207ENST00000483969 GABBR2O75899 941 aa17.42■□□□□ 0.38
COL8A1-207ENST00000483969 PROM2Q8N271 834 aa17.39■□□□□ 0.37
COL8A1-207ENST00000483969 CLCN6P51797 869 aa17.33■□□□□ 0.36
COL8A1-207ENST00000483969 ZNF579Q8NAF0 562 aaKnown RBP17.25■□□□□ 0.35
COL8A1-207ENST00000483969 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL8A1-207ENST00000483969 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
COL8A1-207ENST00000483969 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
COL8A1-207ENST00000483969 MNX1P50219 401 aaPredicted RBP17.17■□□□□ 0.34
COL8A1-207ENST00000483969 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
COL8A1-207ENST00000483969 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
COL8A1-207ENST00000483969 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
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