RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CCDC88AQ3V6T2 1871 aa8.71□□□□□ -1.01
SNX13-208ENST00000482558 RANBP6O60518 1105 aaKnown RBP8.71□□□□□ -1.02
SNX13-208ENST00000482558 USP17L7P0C7H9 530 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 TM4SF1P30408 202 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 NDUFA8P51970 172 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 NLRP12P59046 1061 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 MECOMQ03112 1051 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 CHAF1AQ13111 956 aaPredicted RBP8.71□□□□□ -1.02
SNX13-208ENST00000482558 NOLC1Q14978 699 aaKnown RBP eCLIP8.71□□□□□ -1.02
SNX13-208ENST00000482558 PTPAQ15257 358 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 GALNT17Q6IS24 598 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 CTR9Q6PD62 1173 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 FAM196AQ6ZSG2 479 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 LUZP1Q86V48 1076 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 DGKHQ86XP1 1220 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 CEP120Q8N960 986 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 TRIML1Q8N9V2 468 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 CTCFLQ8NI51 663 aaPredicted RBP8.71□□□□□ -1.02
SNX13-208ENST00000482558 ANKS1AQ92625 1134 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 RPGRQ92834 1020 aaKnown RBP8.71□□□□□ -1.02
SNX13-208ENST00000482558 ANAPC16Q96DE5 110 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 LZTS2Q9BRK4 669 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 SH3GLB2Q9NR46 395 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 TCP11L1Q9NUJ3 509 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 KCNK4Q9NYG8 393 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 HPSEQ9Y251 543 aa8.71□□□□□ -1.02
SNX13-208ENST00000482558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.71□□□□□ -1.02
SNX13-208ENST00000482558 TAF1LQ8IZX4 1826 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 MYH13Q9UKX3 1938 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 A0A1B0GVL5 298 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 KIF28PB7ZC32 967 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 SNAP23O00161 211 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 CBFA2T2O43439 604 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 SMNDC1O75940 238 aaKnown RBP eCLIP8.7□□□□□ -1.02
SNX13-208ENST00000482558 BPNT1O95861 308 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 TUBB4AP04350 444 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 PFKFB1P16118 471 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 CALML3P27482 149 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 GSTT1P30711 240 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 MAN1A1P33908 653 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 KRT2P35908 639 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 ATP11AP98196 1134 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 PWP1Q13610 501 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 DUOXA2Q1HG44 320 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 CRY2Q49AN0 593 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 C2orf27AQ580R0 203 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 FAM117BQ6P1L5 589 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 OLFM4Q6UX06 510 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.7□□□□□ -1.02
SNX13-208ENST00000482558 MTERF4Q7Z6M4 381 aaKnown RBP8.7□□□□□ -1.02
SNX13-208ENST00000482558 DIS3L2Q8IYB7 885 aaKnown RBP8.7□□□□□ -1.02
SNX13-208ENST00000482558 ENAHQ8N8S7 591 aaPredicted RBP8.7□□□□□ -1.02
SNX13-208ENST00000482558 SHKBP1Q8TBC3 707 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 PHKBQ93100 1093 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 FERMT2Q96AC1 680 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 CRAMP1Q96RY5 1269 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 DCP1AQ9NPI6 582 aaPredicted RBP8.7□□□□□ -1.02
SNX13-208ENST00000482558 CASS4Q9NQ75 786 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 DZANK1Q9NVP4 752 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 TUBE1Q9UJT0 475 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 ROBO3Q96MS0 1386 aa8.7□□□□□ -1.02
SNX13-208ENST00000482558 CASZ1Q86V15 1759 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 DLEC1Q9Y238 1755 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 TRIM75PA6NK02 468 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 FSCN2O14926 492 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 PDPK1O15530 556 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 HOXA10P31260 410 aaPredicted RBP8.69□□□□□ -1.02
SNX13-208ENST00000482558 TROAPQ12815 778 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 OTUD7BQ6GQQ9 843 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 ADGRA1Q86SQ6 560 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 PAF1Q8N7H5 531 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 GLIS3Q8NEA6 775 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 KIAA1524Q8TCG1 905 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 NUP133Q8WUM0 1156 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 SDR42E1Q8WUS8 393 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 CHAC2Q8WUX2 184 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 RSRP1Q9BUV0 290 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 FTOQ9C0B1 505 aaKnown RBP eCLIP8.69□□□□□ -1.02
SNX13-208ENST00000482558 RASSF4Q9H2L5 321 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 ABCB6Q9NP58 842 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 CLIP2Q9UDT6 1046 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 SRP68Q9UHB9 627 aaKnown RBP8.69□□□□□ -1.02
SNX13-208ENST00000482558 ADAMTS1Q9UHI8 967 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 MCM8Q9UJA3 840 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 KCNH3Q9ULD8 1083 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 HIF3AQ9Y2N7 669 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 SRPRBQ9Y5M8 271 aaKnown RBP8.69□□□□□ -1.02
SNX13-208ENST00000482558 IRS2Q9Y4H2 1338 aa8.69□□□□□ -1.02
SNX13-208ENST00000482558 COL1A1P02452 1464 aaPredicted RBP8.69□□□□□ -1.02
SNX13-208ENST00000482558 SBF2Q86WG5 1849 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 KLRG2A4D1S0 409 aaPredicted RBP8.68□□□□□ -1.02
SNX13-208ENST00000482558 KIF2AO00139 706 aaPredicted RBP8.68□□□□□ -1.02
SNX13-208ENST00000482558 DYNC1I1O14576 645 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 CCP110O43303 1012 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 DTNBO60941 627 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 TRPA1O75762 1119 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 SMC2O95347 1197 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 IL1R1P14778 569 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 SMARCA1P28370 1054 aa8.68□□□□□ -1.02
SNX13-208ENST00000482558 FCGRTP55899 365 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms