RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 WDR11Q9BZH6 1224 aa18.01■□□□□ 0.47
TMEM53-208ENST00000476724 RNF216Q9NWF9 866 aaPredicted RBP18.01■□□□□ 0.47
TMEM53-208ENST00000476724 RLFQ13129 1914 aa18.01■□□□□ 0.47
TMEM53-208ENST00000476724 ASTN1O14525 1302 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 ATP8B3O60423 1300 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 UBE4BO95155 1302 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 FLOT1O75955 427 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 UCHL3P15374 230 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 PON1P27169 355 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 SETQ01105 290 aaPredicted RBP18■□□□□ 0.47
TMEM53-208ENST00000476724 SUPT20HL1Q3ZLR7 823 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 CFAP221Q4G0U5 840 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 GLE1Q53GS7 698 aaKnown RBP18■□□□□ 0.47
TMEM53-208ENST00000476724 DPY19L2P1Q6NXN4 242 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 NFRKBQ6P4R8 1299 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 GBP6Q6ZN66 633 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 C1orf186Q6ZWK4 172 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 ANKRD13CQ8N6S4 541 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18■□□□□ 0.47
TMEM53-208ENST00000476724 DCPSQ96C86 337 aaKnown RBP18■□□□□ 0.47
TMEM53-208ENST00000476724 NACC1Q96RE7 527 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18■□□□□ 0.47
TMEM53-208ENST00000476724 AS3MTQ9HBK9 375 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 ADAMTS1Q9UHI8 967 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 PCDHGC5Q9Y5F6 944 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 PAPPA2Q9BXP8 1791 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 WDR90Q96KV7 1748 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 A0A087X0T9 212 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 RSPH10B2B2RC85 870 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 BUB1O43683 1085 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 PPP1R12BO60237 982 aaPredicted RBP18■□□□□ 0.47
TMEM53-208ENST00000476724 AKAP3O75969 853 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 FAM228BP0C875 321 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 RSPH10BP0C881 870 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 PRKCIP41743 596 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 HMGCS2P54868 508 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 KIAA0753Q2KHM9 967 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 CEP55Q53EZ4 464 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 TPH2Q8IWU9 490 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 CPXCR1Q8N123 301 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 CCDC102AQ96A19 550 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 WNK4Q96J92 1243 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 MKNK1Q9BUB5 465 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 CCPG1Q9ULG6 757 aa18■□□□□ 0.47
TMEM53-208ENST00000476724 COL11A1P12107 1806 aaPredicted RBP18■□□□□ 0.47
TMEM53-208ENST00000476724 GAS7O60861 476 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 ICAM1P05362 532 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 SLC9A1P19634 815 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 KLRC1P26715 233 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 CTTNQ14247 550 aaKnown RBP17.99■□□□□ 0.47
TMEM53-208ENST00000476724 EPHA7Q15375 998 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 IFI16Q16666 785 aaKnown RBP17.99■□□□□ 0.47
TMEM53-208ENST00000476724 IRF2BP2Q7Z5L9 587 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 MYCT1Q8N699 235 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 DYDC2Q96IM9 177 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 PARVGQ9HBI0 331 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 RAVER2Q9HCJ3 691 aaKnown RBP17.99■□□□□ 0.47
TMEM53-208ENST00000476724 VPS18Q9P253 973 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 A0A0U1RQG5 324 aaPredicted RBP17.99■□□□□ 0.47
TMEM53-208ENST00000476724 PSMC2P35998 433 aaKnown RBP17.99■□□□□ 0.47
TMEM53-208ENST00000476724 TNNT3P45378 269 aaPredicted RBP17.99■□□□□ 0.47
TMEM53-208ENST00000476724 GPR162Q16538 588 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 SULF1Q8IWU6 871 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 SLC35C1Q96A29 364 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 ODF2LQ9ULJ1 636 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 PPP1R9AQ9ULJ8 1098 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 HPCAL4Q9UM19 191 aa17.99■□□□□ 0.47
TMEM53-208ENST00000476724 LOXHD1Q8IVV2 1947 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 GRID2IPA4D2P6 1211 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 UBXN2AP68543 259 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 APBA1Q02410 837 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 ARID5AQ03989 594 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 DCAF17Q5H9S7 520 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-208ENST00000476724 NOL9Q5SY16 702 aaKnown RBP17.98■□□□□ 0.47
TMEM53-208ENST00000476724 DPY19L2Q6NUT2 758 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-208ENST00000476724 GPIHBP1Q8IV16 184 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 NEK9Q8TD19 979 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 PIGOQ8TEQ8 1089 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 LRRC1Q9BTT6 524 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 SLC38A10Q9HBR0 1119 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 CALCOCO1Q9P1Z2 691 aa17.98■□□□□ 0.47
TMEM53-208ENST00000476724 FRMPD4Q14CM0 1322 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 ERICH4A6NGS2 130 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 TGFB1I1O43294 461 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 PALMO75781 387 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 ZNF131P52739 623 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 VGLL4Q14135 290 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 MEI1Q5TIA1 1274 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 VPS36Q86VN1 386 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 BORCS6Q96GS4 357 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 L3MBTL3Q96JM7 780 aaPredicted RBP17.97■□□□□ 0.47
TMEM53-208ENST00000476724 ZNF577Q9BSK1 485 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 TEKT3Q9BXF9 490 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 SNCAIPQ9Y6H5 919 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 PTPRFP10586 1907 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 NFIBO00712 420 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 CES2O00748 559 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 ACTN1P12814 892 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 TNFRSF8P28908 595 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms