RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 CCDC50Q8IVM0 306 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 MAPKAPK5Q8IW41 473 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 ZNF784Q8NCA9 323 aaPredicted RBP9.25□□□□□ -0.93
VPS50-208ENST00000458707 OR2W6PQ8NHA6 318 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 LMBR1Q8WVP7 490 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 RAPGEF5Q92565 580 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 TLCD1Q96CP7 247 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 JPH2Q9BR39 696 aaPredicted RBP9.25□□□□□ -0.93
VPS50-208ENST00000458707 CNOT10Q9H9A5 744 aaKnown RBP9.25□□□□□ -0.93
VPS50-208ENST00000458707 VAT1LQ9HCJ6 419 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 FAM114A2Q9NRY5 505 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 EMILIN3Q9NT22 766 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 CNOT8Q9UFF9 292 aaKnown RBP9.25□□□□□ -0.93
VPS50-208ENST00000458707 MCM8Q9UJA3 840 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 JAG2Q9Y219 1238 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 TRAF3IP3Q9Y228 551 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 LEMD3Q9Y2U8 911 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 GPR75-ASB3A0A0A6YYF3 556 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 A0A0G2JS52 829 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 TMCO5BA8MYB1 307 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 F8VZ95 297 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 DNM1LO00429 736 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 CETN3O15182 167 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 PPFIA2O75334 1257 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 FLOT1O75955 427 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 CYP11B2P19099 503 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 TMOD1P28289 359 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 FLT3P36888 993 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 EPS15P42566 896 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 EIF3BP55884 814 aaKnown RBP9.25□□□□□ -0.93
VPS50-208ENST00000458707 JAM2P57087 298 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 GRIK5Q16478 980 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 ALKBH5Q6P6C2 394 aaKnown RBP9.25□□□□□ -0.93
VPS50-208ENST00000458707 NT5DC3Q86UY8 548 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 CACNA2D3Q8IZS8 1091 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 SYCE1Q8N0S2 351 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 FUKQ8N0W3 1084 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 CCDC26Q8TAB7 109 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 ARHGEF1Q92888 912 aaKnown RBP9.25□□□□□ -0.93
VPS50-208ENST00000458707 COA7Q96BR5 231 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 HES6Q96HZ4 224 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 CCDC114Q96M63 670 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 UBA5Q9GZZ9 404 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 DDX47Q9H0S4 455 aaKnown RBP9.25□□□□□ -0.93
VPS50-208ENST00000458707 KDM4CQ9H3R0 1056 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 CD248Q9HCU0 757 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 SWAP70Q9UH65 585 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 DDX25Q9UHL0 483 aaKnown RBP9.25□□□□□ -0.93
VPS50-208ENST00000458707 SAP30BPQ9UHR5 308 aaKnown RBP9.25□□□□□ -0.93
VPS50-208ENST00000458707 HDAC9Q9UKV0 1011 aa9.25□□□□□ -0.93
VPS50-208ENST00000458707 KRIT1O00522 736 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 DAPK3O43293 454 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 DNAJC8O75937 253 aaPredicted RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 GFPT2O94808 682 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 PLA2G4BP0C869 781 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 SLC9A1P19634 815 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 PON1P27169 355 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 RDXP35241 583 aaKnown RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 CD151P48509 253 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 CDR1P51861 262 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 NEDD9Q14511 834 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 PPP2R5AQ15172 486 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 DDB1Q16531 1140 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 SPRED3Q2MJR0 410 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 ERMARDQ5T6L9 678 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 CYB5D1Q6P9G0 228 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 DNAJC14Q6Y2X3 702 aaPredicted RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 C15orf52Q6ZUT6 534 aaKnown RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 PEX26Q7Z412 305 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 NELFCDQ8IXH7 590 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 MARCH10Q8NA82 808 aaPredicted RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 UBLCP1Q8WVY7 318 aaPredicted RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 CCT6BQ92526 530 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 ACSBG1Q96GR2 724 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 NAP1L4Q99733 375 aaKnown RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 AP1M1Q9BXS5 423 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 MFRPQ9BY79 579 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 CENPHQ9H3R5 247 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 KANSL2Q9H9L4 492 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 TBC1D7Q9P0N9 293 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 AMACRQ9UHK6 382 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 PCDHA12Q9UN75 941 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 NOVA2Q9UNW9 492 aaKnown RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 DIS3Q9Y2L1 958 aaKnown RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 THRAP3Q9Y2W1 955 aaKnown RBP9.24□□□□□ -0.93
VPS50-208ENST00000458707 CNTNAP4Q9C0A0 1308 aa9.24□□□□□ -0.93
VPS50-208ENST00000458707 PNMA6FA0A0J9YX94 578 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 GTPBP10A4D1E9 387 aaKnown RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 E9PMD0 336 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 AFPP02771 609 aaKnown RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 H2AFZP0C0S5 128 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 ACTN1P12814 892 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 ITGA4P13612 1032 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 DRD4P21917 467 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 NR2F2P24468 414 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 SCTRP47872 440 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 TNNI2P48788 182 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 SLC12A3P55017 1021 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 MAGOHP61326 146 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms