RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 SOX11P35716 441 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 POTEBQ6S5H4 581 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 TBC1D10CQ8IV04 446 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 A6NNZ2 444 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 ZBED1O96006 694 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 TXNRD1Q16881 649 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 TUBB8Q3ZCM7 444 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 ARMCX2Q7L311 632 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 TAS2R42Q7RTR8 314 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 EXOC8Q8IYI6 725 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 NUDCD1Q96RS6 583 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 POLR3FQ9H1D9 316 aaPredicted RBP14.14□□□□□ -0.15
SPG11-202ENST00000427534 CD209Q9NNX6 404 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 CLCA2Q9UQC9 943 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 COL15A1P39059 1388 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 PRPF4O43172 522 aaKnown RBP eCLIP14.14□□□□□ -0.15
SPG11-202ENST00000427534 CAPRIN1Q14444 709 aaKnown RBP14.14□□□□□ -0.15
SPG11-202ENST00000427534 TMCO5AQ8N6Q1 288 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 SH3KBP1Q96B97 665 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 HAUS4Q9H6D7 363 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 BCL2L12Q9HB09 334 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 ATP6V0A4Q9HBG4 840 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 ASMTLO95671 621 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 RASSF2P50749 326 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 TSPY1Q01534 308 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 OTULINQ96BN8 352 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 JPH2Q9BR39 696 aaPredicted RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 GPBP1L1Q9HC44 474 aaPredicted RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 KLHL8Q9P2G9 620 aaPredicted RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 PIN4Q9Y237 131 aaKnown RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 PTCH1Q13635 1447 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 UBA6A0AVT1 1052 aaPredicted RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 HUS1O60921 280 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 GAP43P17677 238 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 PHEXP78562 749 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 SFR1Q86XK3 245 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 SDCCAG3Q96C92 435 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 NHEJ1Q9H9Q4 299 aaPredicted RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 HOXC10Q9NYD6 342 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 TPX2Q9ULW0 747 aaKnown RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 CPSF1Q10570 1443 aaKnown RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 SART1O43290 800 aaKnown RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 ASNSP08243 561 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 C6orf222P0C671 652 aaPredicted RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 ETF1P62495 437 aaKnown RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 TAF1CQ15572 869 aaPredicted RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 PAGE5Q96GU1 130 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 TMEM206Q9H813 350 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 PYCARDQ9ULZ3 195 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 STX1BP61266 288 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 ADGRF4Q8IZF3 695 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 ARHGAP24Q8N264 748 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 PREX2Q70Z35 1606 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 CELF2O95319 508 aaKnown RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 POU5F1BQ06416 359 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 ZNF658Q5TYW1 1059 aaPredicted RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 TMEM179Q6ZVK1 233 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 PDCD7Q8N8D1 485 aaKnown RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 LINC00301Q8NCQ3 95 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 MLXIPLQ9NP71 852 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 CYP2E1P05181 493 aaPredicted RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 NLRP11P59045 1033 aaKnown RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 ARL13BQ3SXY8 428 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.13□□□□□ -0.151e-8■■■■■ 58.8
SPG11-202ENST00000427534 PBXIP1Q96AQ6 731 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 CUEDC2Q9H467 287 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 PDE11AQ9HCR9 933 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 TYW1Q9NV66 732 aaKnown RBP14.13□□□□□ -0.15
SPG11-202ENST00000427534 NDFIP2Q9NV92 336 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 HPCAL4Q9UM19 191 aa14.13□□□□□ -0.15
SPG11-202ENST00000427534 H7C1W4 665 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 DYNC1LI2O43237 492 aaPredicted RBP14.12□□□□□ -0.15
SPG11-202ENST00000427534 ZNF667Q5HYK9 610 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 RFWD2Q8NHY2 731 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 CAPN10Q9HC96 672 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 CNOT7Q9UIV1 285 aaKnown RBP14.12□□□□□ -0.15
SPG11-202ENST00000427534 ZNF233A6NK53 670 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 TFRCP02786 760 aaKnown RBP14.12□□□□□ -0.15
SPG11-202ENST00000427534 RPSAP08865 295 aaKnown RBP14.12□□□□□ -0.15
SPG11-202ENST00000427534 KIF12Q96FN5 646 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 XAB2Q9HCS7 855 aaKnown RBP14.12□□□□□ -0.15
SPG11-202ENST00000427534 RPS6KA4O75676 772 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 TSNAXIP1Q2TAA8 658 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 PAN2Q504Q3 1202 aaKnown RBP14.12□□□□□ -0.15
SPG11-202ENST00000427534 PNMA2Q9UL42 364 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 EVI5O60447 810 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 GNAT1P11488 350 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 TMC4Q7Z404 712 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 FAM160B2Q86V87 743 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 SCYL3Q8IZE3 742 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 NCLNQ969V3 563 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 PPP1R13BQ96KQ4 1090 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 RCOR1Q9UKL0 485 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 SLC4A7Q9Y6M7 1214 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 CYP27B1O15528 508 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 DDHD2O94830 711 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 DRP2Q13474 957 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 LBRQ14739 615 aaKnown RBP14.12□□□□□ -0.15
SPG11-202ENST00000427534 NECTIN1Q15223 517 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms