RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 SMYD4Q8IYR2 804 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 SPZ1Q9BXG8 430 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 PRDM1O75626 825 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 PDIA5Q14554 519 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 PTPROQ16827 1216 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 CAPN12Q6ZSI9 719 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 SIX5Q8N196 739 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 LZTS1Q9Y250 596 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 ZMYM6O95789 1325 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 TRAPPC3O43617 180 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 LMNAP02545 664 aaKnown RBP12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 SP100P23497 879 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 EIF4BP23588 611 aaKnown RBP12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 CRKP46108 304 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 CFAP61Q8NHU2 1237 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 UBA5Q9GZZ9 404 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 TSKSQ9UJT2 592 aa12.24□□□□□ -0.45
RAPGEF3-202ENST00000395358 E7EWF7 191 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 PSMD14O00487 310 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 ZBTB43O43298 467 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 LDHAP00338 332 aaKnown RBP12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 RIPK1Q13546 671 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 SLC39A14Q15043 492 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 KLC3Q6P597 504 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 WASF1Q92558 559 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 NSUN4Q96CB9 384 aaKnown RBP12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 CYTH2Q99418 400 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 RABL2BQ9UNT1 228 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 FRMD4BQ9Y2L6 1034 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 ARFGEF2Q9Y6D5 1785 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 KCNJ18B7U540 433 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 PRKAB2O43741 272 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 ATP9AO75110 1047 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 CAPN15O75808 1086 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 KRT13P13646 458 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 CHN1P15882 459 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 ERCC5P28715 1186 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 METAP2P50579 478 aaKnown RBP eCLIP12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 KCNJ12Q14500 433 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 INAQ16352 499 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 LRRC34Q8IZ02 419 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 FHDC1Q9C0D6 1143 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 TRIM43BA6NCK2 446 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 IRGCQ6NXR0 463 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 CCDC110Q8TBZ0 833 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 TMEM87BQ96K49 555 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 MLXIPLQ9NP71 852 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 MRGBPQ9NV56 204 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 MTRF1LQ9UGC7 380 aaKnown RBP12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 MROH7-TTC4A0A0A0MT08 1334 aa12.23□□□□□ -0.45
RAPGEF3-202ENST00000395358 TCP10L2B9ZVM9 353 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 MARCH6O60337 910 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 STK10O94804 968 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 LMBRD2Q68DH5 695 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 MMGT1Q8N4V1 131 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 SMCR8Q8TEV9 937 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 TUBA8Q9NY65 449 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 PNMA2Q9UL42 364 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 KCNK3O14649 394 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 NCK2O43639 380 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 ZNF24P17028 368 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 FMR1Q06787 632 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 EHHADHQ08426 723 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 TBL3Q12788 808 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 PAK1Q13153 545 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 ADAM9Q13443 819 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 LRRC14Q15048 493 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 RCN1Q15293 331 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 KCTD21Q4G0X4 260 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 GDAP1Q8TB36 358 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 MPP4Q96JB8 637 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 EHD2Q9NZN4 543 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 BTBD7Q9P203 1132 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 SNX12Q9UMY4 172 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 USP15Q9Y4E8 981 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 CLRN2A0PK11 232 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 SMAPO00193 183 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 VHLP40337 213 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 MTTPP55157 894 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 ZNF554Q86TJ5 538 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 PIGOQ8TEQ8 1089 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 FBXL5Q9UKA1 691 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 ITGB1BP2Q9UKP3 347 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 RIC1Q4ADV7 1423 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 A8MUI8 341 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 ATP6V1C1P21283 382 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 NR1I3Q14994 352 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 PPP1R21Q6ZMI0 780 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 SAPCD2Q86UD0 394 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 TMEM139Q8IV31 216 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 ARHGAP24Q8N264 748 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 PALMDQ9NP74 551 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 LRCH1Q9Y2L9 728 aa12.22□□□□□ -0.45
RAPGEF3-202ENST00000395358 S100BP04271 92 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF3-202ENST00000395358 CYP21A2P08686 494 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms