RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 TANC1Q9C0D5 1861 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 MYH4Q9Y623 1939 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 PLIN4Q96Q06 1357 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 PRR23AA6NEV1 266 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 NOP56O00567 594 aaKnown RBP9.16□□□□□ -0.94
CASP4-201ENST00000393150 TNFRSF10BO14763 440 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 GRM6O15303 877 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 ABL1P00519 1130 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 F2P00734 622 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 MMP1P03956 469 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 TOP1P11387 765 aaKnown RBP9.16□□□□□ -0.94
CASP4-201ENST00000393150 ATF7P17544 494 aaPredicted RBP9.16□□□□□ -0.94
CASP4-201ENST00000393150 SLC16A2P36021 539 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 RRP1P56182 461 aaKnown RBP9.16□□□□□ -0.94
CASP4-201ENST00000393150 PPARAQ07869 468 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 ARHGAP1Q07960 439 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 FAM26DQ5JW98 314 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 C16orf46Q6P387 395 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 CCDC62Q6P9F0 684 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 BTNL9Q6UXG8 535 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 LYSMD3Q7Z3D4 306 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 DGLUCYQ7Z3D6 616 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 ALDH16A1Q8IZ83 802 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 ADSSL1Q8N142 457 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 KBTBD3Q8NAB2 608 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 SMRP1Q8NCR6 262 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 HELQQ8TDG4 1101 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 KAT2BQ92831 832 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 RIPOR3Q96MK2 946 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 SPATA33Q96N06 139 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 TLE6Q9H808 572 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 MLXIPQ9HAP2 919 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 DNMT3LQ9UJW3 386 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 WDR19Q8NEZ3 1342 aa9.16□□□□□ -0.94
CASP4-201ENST00000393150 FIGNL2A6NMB9 653 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 ZNF286BP0CG31 522 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 STAG3L1P0CL83 205 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 NPR3P17342 541 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 NBL1P41271 181 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 PHKA2P46019 1235 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 PLA2G4AP47712 749 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 VCPP55072 806 aaKnown RBP9.15□□□□□ -0.94
CASP4-201ENST00000393150 DLX2Q07687 328 aaPredicted RBP9.15□□□□□ -0.94
CASP4-201ENST00000393150 CBX2Q14781 532 aaPredicted RBP9.15□□□□□ -0.94
CASP4-201ENST00000393150 PTPN21Q16825 1174 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 USH1GQ495M9 461 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 WDR44Q5JSH3 913 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 SPOUT1Q5T280 376 aaKnown RBP9.15□□□□□ -0.94
CASP4-201ENST00000393150 TMCO4Q5TGY1 634 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 SERINC5Q86VE9 423 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 P2RX5Q93086 422 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 NEK1Q96PY6 1258 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 CDCA3Q99618 268 aaPredicted RBP9.15□□□□□ -0.94
CASP4-201ENST00000393150 LRRCC1Q9C099 1032 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 PHACTR1Q9C0D0 580 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 ECHDC1Q9NTX5 307 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 DDX41Q9UJV9 622 aaKnown RBP9.15□□□□□ -0.94
CASP4-201ENST00000393150 ZNF215Q9UL58 517 aaPredicted RBP9.15□□□□□ -0.94
CASP4-201ENST00000393150 ZNF232Q9UNY5 417 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 TNNQ9UQP3 1299 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 MRPL11Q9Y3B7 192 aaKnown RBP9.15□□□□□ -0.94
CASP4-201ENST00000393150 USP15Q9Y4E8 981 aaPredicted RBP9.15□□□□□ -0.94
CASP4-201ENST00000393150 PCDHB12Q9Y5F1 795 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 CACNA1BQ00975 2339 aa9.15□□□□□ -0.94
CASP4-201ENST00000393150 CACNA1GO43497 2377 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 DHX16O60231 1041 aaKnown RBP9.14□□□□□ -0.95
CASP4-201ENST00000393150 TBX10O75333 385 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 ARIH2O95376 493 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 RPLP2P05387 115 aaKnown RBP9.14□□□□□ -0.95
CASP4-201ENST00000393150 CTSHP09668 335 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 TGFB3P10600 412 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 HSPD1P10809 573 aaKnown RBP9.14□□□□□ -0.95
CASP4-201ENST00000393150 RHOQP17081 205 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 NRIP1P48552 1158 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 BMS1Q14692 1282 aaKnown RBP9.14□□□□□ -0.95
CASP4-201ENST00000393150 TRIM71Q2Q1W2 868 aaKnown RBP9.14□□□□□ -0.95
CASP4-201ENST00000393150 GPATCH4Q5T3I0 446 aaKnown RBP9.14□□□□□ -0.95
CASP4-201ENST00000393150 PDE12Q6L8Q7 609 aaKnown RBP9.14□□□□□ -0.95
CASP4-201ENST00000393150 ASCL5Q7RTU5 278 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 RBM23Q86U06 439 aaKnown RBP9.14□□□□□ -0.95
CASP4-201ENST00000393150 CLEC4DQ8WXI8 215 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 OSBP2Q969R2 916 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 CTAGE1Q96RT6 745 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 USP26Q9BXU7 913 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 SEMA4AQ9H3S1 761 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 ALG13Q9NP73 1137 aaKnown RBP9.14□□□□□ -0.95
CASP4-201ENST00000393150 PLAGL2Q9UPG8 496 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 ABCB11O95342 1321 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 FRMPD2Q68DX3 1309 aaPredicted RBP9.14□□□□□ -0.95
CASP4-201ENST00000393150 ADGRA3Q8IWK6 1321 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 MICAL3Q7RTP6 2002 aa9.14□□□□□ -0.95
CASP4-201ENST00000393150 TRIOO75962 3097 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 H3BRB1 525 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 HAS3O00219 553 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 ZNF200P98182 395 aaPredicted RBP9.13□□□□□ -0.95
CASP4-201ENST00000393150 TRAF1Q13077 416 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 MBTPS1Q14703 1052 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 TCTN1Q2MV58 587 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 RRP12Q5JTH9 1297 aaKnown RBP9.13□□□□□ -0.95
CASP4-201ENST00000393150 TTBK2Q6IQ55 1244 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms