RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 TBK1Q9UHD2 729 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 TDP2O95551 362 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 ZBED1O96006 694 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 DBN1Q16643 649 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 C2orf69Q8N8R5 385 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 NSUN4Q96CB9 384 aaKnown RBP21.13■□□□□ 0.97
LMO4-202ENST00000370544 PP2D1A8MPX8 630 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 QARSP47897 775 aaKnown RBP21.12■□□□□ 0.97
LMO4-202ENST00000370544 SPP2Q13103 211 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 STOX1Q6ZVD7 989 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 FAM213AQ9BRX8 229 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 ADAM22Q9P0K1 906 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 CUL1Q13616 776 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 EXOC1LA0A1B0GW35 172 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 C12orf60Q5U649 245 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 STAG2Q8N3U4 1231 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 ZMYND12Q9H0C1 365 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 ANGPTL3Q9Y5C1 460 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 CAMSAP1Q5T5Y3 1602 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 DENND3A2RUS2 1198 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 SLC4A1P02730 911 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 CLCN6P51797 869 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 ZNF394Q53GI3 561 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 ALS2CLQ60I27 953 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 CNOT10Q9H9A5 744 aaKnown RBP21.12■□□□□ 0.97
LMO4-202ENST00000370544 CNOT8Q9UFF9 292 aaKnown RBP21.12■□□□□ 0.97
LMO4-202ENST00000370544 SUGT1Q9Y2Z0 365 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 USP42Q9H9J4 1324 aaKnown RBP21.12■□□□□ 0.97
LMO4-202ENST00000370544 C1orf167Q5SNV9 1468 aa21.12■□□□□ 0.97
LMO4-202ENST00000370544 RASGRF2O14827 1237 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 CLTAP09496 248 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 TSTA3Q13630 321 aaPredicted RBP21.11■□□□□ 0.97
LMO4-202ENST00000370544 PRPF38AQ8NAV1 312 aaKnown RBP21.11■□□□□ 0.97
LMO4-202ENST00000370544 BBS9Q3SYG4 887 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 ZNF568Q3ZCX4 644 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 POLD4Q9HCU8 107 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 GOLGA8QA0A0J9YX86 632 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 GOLGA8OA6NCC3 632 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 GOLGA8NF8WBI6 632 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 ATP2C1P98194 919 aaPredicted RBP21.11■□□□□ 0.97
LMO4-202ENST00000370544 ZNF699Q32M78 642 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 CEP120Q8N960 986 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 GABBR1Q9UBS5 961 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 ANAPC7Q9UJX3 599 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 TLK1Q9UKI8 766 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 SETD1BQ9UPS6 1966 aaKnown RBP21.11■□□□□ 0.97
LMO4-202ENST00000370544 ZBTB7AO95365 584 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 HERC5Q9UII4 1024 aaKnown RBP21.11■□□□□ 0.97
LMO4-202ENST00000370544 CCDC188H7C350 402 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 EXOSC10Q01780 885 aaKnown RBP21.11■□□□□ 0.97
LMO4-202ENST00000370544 NFX1Q12986 1120 aaKnown RBP21.11■□□□□ 0.97
LMO4-202ENST00000370544 SWSAP1Q6NVH7 229 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 LXNQ9BS40 222 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 ABCB6Q9NP58 842 aa21.11■□□□□ 0.97
LMO4-202ENST00000370544 CTNND1O60716 968 aaKnown RBP21.1■□□□□ 0.97
LMO4-202ENST00000370544 TJP3O95049 919 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 USP11P51784 963 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 GFPT1Q06210 699 aaPredicted RBP21.1■□□□□ 0.97
LMO4-202ENST00000370544 IFT88Q13099 833 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 RCN2Q14257 317 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 SHC4Q6S5L8 630 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 GNAT1P11488 350 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 SESN3P58005 492 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 TOPORSQ9NS56 1045 aaPredicted RBP21.1■□□□□ 0.97
LMO4-202ENST00000370544 SEL1LQ9UBV2 794 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 IPO5O00410 1097 aaKnown RBP21.1■□□□□ 0.97
LMO4-202ENST00000370544 EIF3BP55884 814 aaKnown RBP21.1■□□□□ 0.97
LMO4-202ENST00000370544 CENPUQ71F23 418 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 NGRNQ9NPE2 291 aaKnown RBP21.1■□□□□ 0.97
LMO4-202ENST00000370544 GPC3P51654 580 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 TMEM35BQ8NCS4 154 aa21.1■□□□□ 0.97
LMO4-202ENST00000370544 NOVA2Q9UNW9 492 aaKnown RBP21.1■□□□□ 0.97
LMO4-202ENST00000370544 MIF4GDA9UHW6 222 aaKnown RBP21.09■□□□□ 0.97
LMO4-202ENST00000370544 WDR46O15213 610 aaKnown RBP21.09■□□□□ 0.97
LMO4-202ENST00000370544 KPNA2P52292 529 aaKnown RBP21.09■□□□□ 0.97
LMO4-202ENST00000370544 PSMC5P62195 406 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 GPC5P78333 572 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 CASP8Q14790 479 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 DEPDC1BQ8WUY9 529 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 NFU1Q9UMS0 254 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 EVI5O60447 810 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 GUCY1A2P33402 732 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 VAMP7P51809 220 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 STX1BP61266 288 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 TMEM270Q6UE05 265 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 SRBD1Q8N5C6 995 aaKnown RBP21.09■□□□□ 0.97
LMO4-202ENST00000370544 ACAD9Q9H845 621 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 SYNGAP1Q96PV0 1343 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 SERPINB6P35237 376 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 BZW1Q7L1Q6 419 aaKnown RBP21.09■□□□□ 0.97
LMO4-202ENST00000370544 PSPC1Q8WXF1 523 aaKnown RBP21.09■□□□□ 0.97
LMO4-202ENST00000370544 PRKAG2Q9UGJ0 569 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 PDIK1LQ8N165 341 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 TBC1D16Q8TBP0 767 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 ATP6V1E2Q96A05 226 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 EIF2AK1Q9BQI3 630 aaKnown RBP21.09■□□□□ 0.97
LMO4-202ENST00000370544 VCX3AQ9NNX9 186 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 LMTK2Q8IWU2 1503 aa21.09■□□□□ 0.97
LMO4-202ENST00000370544 PLS3P13797 630 aa21.08■□□□□ 0.97
LMO4-202ENST00000370544 TTLL4Q14679 1199 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms