RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Rasgrp4Q8BTM9 673 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 PlvapQ91VC4 438 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Nlrp4cQ3TKR3 982 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Oog4Q4G0C7 502 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 DbnlQ62418 436 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ston1Q8CDJ8 730 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 SftpbP50405 377 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Znf148Q61624 794 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Scfd1Q8BRF7 639 aaKnown RBP13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 HnrnprQ8VHM5 632 aaKnown RBP13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Syf2Q9D198 242 aaKnown RBP13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Tmed8Q3UHI4 326 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Art3Q8R2G4 371 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Upb1Q8VC97 393 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Gimap4Q99JY3 219 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ctnnd1P30999 938 aaKnown RBP13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Acot6Q32Q92 419 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ciapin1Q8WTY4 309 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Stau1Q9Z108 487 aaKnown RBP13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Gm9774A0A0A6YVU8 407 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Kifc3O35231 824 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ppp3ccP48455 513 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ncoa4Q5U4H9 625 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rps6kc1Q8BLK9 1056 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Q9D937 123 aaKnown RBP13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 PapolbQ9WVP6 641 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rnf17Q99MV7 1640 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Atp10aO54827 1508 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Olfr310B2RVZ1 332 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Eif4a3Q91VC3 411 aaKnown RBP13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ppp2r3dQ9Z176 491 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Lmtk2Q3TYD6 1471 aa13.35□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Syndig1A2ANU3 258 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cyp2c69E9PXC3 491 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 1700113H08RikE9Q9Q5 327 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 CcnoP0C242 352 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cyp2c40P56657 491 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Adgra1Q8C4G9 578 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Tmem119Q8R138 280 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Doc2gQ9ESN1 387 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Nr1h3Q9Z0Y9 445 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Shcbp1Q9Z179 668 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ubn2Q80WC1 1314 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 TpbpaP13438 124 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Lig1P37913 916 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Spata4Q8K3V1 295 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Wars2Q9CYK1 360 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Mphosph6Q9D1Q1 161 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Lzts3A2AHG0 700 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 L1camP11627 1260 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Atxn10P28658 475 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Igfbp4P47879 254 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 HpdP49429 393 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Drp2Q05AA6 957 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 PRAG1Q571I4 1179 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Nme8Q715T0 586 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rpn1Q91YQ5 608 aaKnown RBP13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Sec24cG3X972 1096 aaKnown RBP13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Nr2c1Q505F1 590 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Myo1dQ5SYD0 1006 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Usp8Q80U87 1080 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Vps37aQ8CHS8 397 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Prpf3Q922U1 683 aaKnown RBP13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ferd3lQ923Z4 168 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 A530032D15RikE9Q422 215 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 G430095P16RikE9Q913 147 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Gm8879F6R3J9 157 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Chl1P70232 1209 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Kiaa1468Q148V7 1216 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Mylk3Q3UIZ8 795 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ankrd34bQ3UUF8 508 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 L3mbtl3Q8BLB7 883 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Hps6Q8BLY7 805 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Spata31d1bE9QA57 1361 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 NntQ61941 1086 aaKnown RBP13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Phf23Q8BSN5 401 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 N4bp3Q8C7U1 537 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Dynll2Q9D0M5 89 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Tex21Q9R0U9 575 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Upf3bQ3ULL6 472 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Pla2g4eQ50L42 875 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Zc4h2Q68FG0 224 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Gpc3Q8CFZ4 579 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Vps39Q8R5L3 886 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Vps33aQ9D2N9 598 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Akap12Q9WTQ5 1684 aa13.34□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Lrrc63A6H694 637 aa13.33□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Arl4cP61208 192 aa13.33□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Parp3Q3ULW8 533 aa13.33□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Gucy2gQ6TL19 1100 aa13.33□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Trim52Q8CDV4 233 aa13.33□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Bbs7Q8K2G4 715 aa13.33□□□□□ -0.27
Col6a3-208ENSMUST00000188587 HdlbpQ8VDJ3 1268 aaKnown RBP13.33□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Fads3Q9JJE7 449 aa13.33□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Supt20hQ7TT00 530 aaKnown RBP13.33□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Pde10aQ8CA95 790 aa13.33□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Lman1lQ8VCD3 505 aa13.33□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Ehd4Q9EQP2 541 aa13.33□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Cdhr2E9Q7P9 1308 aa13.33□□□□□ -0.28
Col6a3-208ENSMUST00000188587 Cyp2c23E9Q5K4 494 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms