RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Slc4a7Q8BTY2 1034 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Scyl2Q8CFE4 930 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Olfr805Q8VFI4 319 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Tas1r3Q925D8 858 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 IkbkbO88351 757 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Irf8P23611 424 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 MsnP26041 577 aaKnown RBP28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Ccnd2P30280 289 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Carmil2Q3V3V9 1296 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Ccpg1Q640L3 753 aa28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Rbm10Q99KG3 930 aaKnown RBP28.19■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Taf4bG5E8Z2 855 aa28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Tnfrsf11aO35305 625 aa28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 SnrpfP62307 86 aaKnown RBP28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Edem3Q2HXL6 931 aa28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Tmem63bQ3TWI9 832 aa28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Moxd2Q7TT41 619 aa28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 PpatQ8CIH9 517 aa28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Ccdc12Q8R344 166 aaKnown RBP28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Rpn1Q91YQ5 608 aaKnown RBP28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 1700020D05RikQ99PB1 294 aa28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Q9CYI0 393 aa28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Nol7Q9D7Z3 254 aaKnown RBP28.18■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Syt2P46097 422 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Dusp4Q8BFV3 398 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Btbd7Q8CFE5 1130 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Eif4a3Q91VC3 411 aaKnown RBP28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Slc15a2Q9ES07 729 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Col11a1Q61245 1804 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 RptorQ8K4Q0 1335 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Ildr2B5TVM2 661 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Ube3aO08759 870 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Olfm4Q3UZZ4 505 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Atp13a4Q5XF90 1193 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Sema4bQ62179 823 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Zbtb7bQ64321 544 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Xpnpep1Q6P1B1 623 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Ppp2r5aQ6PD03 486 aa28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Ddx39aQ8VDW0 427 aaKnown RBP28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Myh9Q8VDD5 1960 aaKnown RBP28.17■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Gm11549A0A286YD83 63 aa28.16■■■□□ 2.1
Tpm1-216ENSMUST00000113707 MafbP54841 323 aa28.16■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Hmgcs2P54869 508 aa28.16■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Gm1587Q3UT80 123 aa28.16■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Pcdhgc5Q91XW9 944 aa28.16■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Cyth3O08967 399 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 GcP21614 476 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Slc16a10Q3U9N9 512 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Trnp1Q80ZI1 223 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 3830417A13RikQ8BQJ2 303 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Bicdl2Q8CHW5 507 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Cfap53Q9D439 514 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Tpcn1Q9EQJ0 817 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Klra17Q9JMA4 273 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Bub1bQ9Z1S0 1052 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Fndc3c1Q6DFV6 1356 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Gimap9G3X987 291 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Serpinb2P12388 415 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Serpinc1P32261 465 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Dpcr1Q3TNW5 500 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Ecm1Q61508 559 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Actn1Q7TPR4 892 aaKnown RBP28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Stoml1Q8CI66 399 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Itm2cQ91VK4 269 aa28.15■■■□□ 2.1
Tpm1-216ENSMUST00000113707 AW822073A0A0N4SUK1 652 aa28.14■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Serpina1eQ00898 413 aa28.14■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Adamts18Q4VC17 1219 aa28.14■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Trim25Q61510 634 aaKnown RBP28.14■■■□□ 2.1
Tpm1-216ENSMUST00000113707 NntQ61941 1086 aaKnown RBP28.14■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Sestd1Q80UK0 696 aa28.14■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Maats1Q8BRC6 783 aa28.14■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Usp37Q8C0R0 979 aa28.14■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Fam76aQ922G2 307 aa28.14■■■□□ 2.1
Tpm1-216ENSMUST00000113707 Fthl17aQ9DAX0 182 aa28.14■■■□□ 2.1
Tpm1-216ENSMUST00000113707 MybP06876 636 aa28.13■■■□□ 2.09
Tpm1-216ENSMUST00000113707 LxnP70202 222 aa28.13■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Casp7P97864 303 aa28.13■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Gm3414Q3TNU4 584 aa28.13■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Oog4Q4G0C7 502 aa28.13■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Ccdc42Q5SV66 316 aa28.13■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Zfp397Q7TNK4 527 aa28.13■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Vps18Q8R307 973 aa28.13■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Mzb1Q9D8I1 188 aa28.13■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Tlr5Q9JLF7 859 aa28.13■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Mdm4O35618 489 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Adcy7P51829 1099 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Meis3P97368 378 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Asic3Q6X1Y6 530 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Uap1Q91YN5 522 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Grtp1Q9D3N8 359 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Rabgap1A2AWA9 1064 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Kmt5aQ2YDW7 349 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Mrgprb1Q3UG61 350 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Tmem232Q5K6N0 675 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 A1cfQ5YD48 595 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Gas8Q60779 478 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Six2Q62232 296 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Slc7a6osQ7TPE5 306 aa28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Vwa5aQ99KC8 793 aaKnown RBP28.12■■■□□ 2.09
Tpm1-216ENSMUST00000113707 Hspbp1Q99P31 357 aaKnown RBP28.12■■■□□ 2.09
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms