RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C YBL028CP38202 106 aa3.16□□□□□ -1.9
CCL1YPR025C GDT1P38301 280 aaPredicted RBP3.16□□□□□ -1.9
CCL1YPR025C SEC27P41811 889 aaKnown RBP3.16□□□□□ -1.9
CCL1YPR025C YDL199CQ12407 687 aa3.16□□□□□ -1.9
CCL1YPR025C PCL9Q12477 304 aa3.16□□□□□ -1.9
CCL1YPR025C MEX67Q99257 599 aaKnown RBP3.16□□□□□ -1.9
CCL1YPR025C SCH9P11792 824 aaKnown RBP3.15□□□□□ -1.91
CCL1YPR025C MSP1P28737 362 aa3.15□□□□□ -1.91
CCL1YPR025C FAA1P30624 700 aaKnown RBP3.15□□□□□ -1.91
CCL1YPR025C SWI3P32591 825 aa3.15□□□□□ -1.91
CCL1YPR025C IES6P32617 166 aa3.15□□□□□ -1.91
CCL1YPR025C LAS1P36146 502 aaPredicted RBP3.15□□□□□ -1.91
CCL1YPR025C YDL114WQ07530 308 aa3.15□□□□□ -1.91
CCL1YPR025C PEX27Q08580 376 aa3.15□□□□□ -1.91
CCL1YPR025C YOR338WQ99326 363 aa3.15□□□□□ -1.91
CCL1YPR025C UBA1P22515 1024 aaKnown RBP3.14□□□□□ -1.91
CCL1YPR025C CDC50P25656 391 aa3.14□□□□□ -1.91
CCL1YPR025C PSO2P30620 661 aa3.14□□□□□ -1.91
CCL1YPR025C SPO23P33757 523 aa3.14□□□□□ -1.91
CCL1YPR025C APE4P38821 490 aa3.14□□□□□ -1.91
CCL1YPR025C SNL1P40548 159 aa3.14□□□□□ -1.91
CCL1YPR025C TSA2Q04120 196 aa3.14□□□□□ -1.91
CCL1YPR025C NFI1Q12216 726 aa3.14□□□□□ -1.91
CCL1YPR025C HSP26P15992 214 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91 RIP-Chip
CCL1YPR025C MRPL8P22353 238 aa3.13□□□□□ -1.91
CCL1YPR025C FUN26P31381 517 aa3.13□□□□□ -1.91
CCL1YPR025C PRS1P32895 427 aaKnown RBP3.13□□□□□ -1.91
CCL1YPR025C ADH5P38113 351 aaKnown RBP3.13□□□□□ -1.91
CCL1YPR025C OM14P38325 134 aa3.13□□□□□ -1.91
CCL1YPR025C YER186CP40101 306 aa3.13□□□□□ -1.91
CCL1YPR025C REX2P54964 269 aaKnown RBP3.13□□□□□ -1.91
CCL1YPR025C GAT3Q07928 141 aa3.13□□□□□ -1.91
CCL1YPR025C RPS18AP0CX55 146 aaKnown RBP3.12□□□□□ -1.91
CCL1YPR025C RPS18BP0CX56 146 aaPredicted RBP3.12□□□□□ -1.91
CCL1YPR025C PHO84P25297 587 aaKnown RBP3.12□□□□□ -1.91
CCL1YPR025C MSK1P32048 576 aa3.12□□□□□ -1.91
CCL1YPR025C VPH1P32563 840 aaKnown RBP3.12□□□□□ -1.91
CCL1YPR025C PFS1P38872 237 aa3.12□□□□□ -1.91
CCL1YPR025C TIM17P39515 158 aa3.12□□□□□ -1.91
CCL1YPR025C LYS12P40495 371 aaKnown RBP3.12□□□□□ -1.91
CCL1YPR025C AIP1P46680 615 aaKnown RBP3.12□□□□□ -1.91
CCL1YPR025C RET3P53600 189 aa3.12□□□□□ -1.91
CCL1YPR025C YNR068CP53754 272 aa3.12□□□□□ -1.91
CCL1YPR025C SKI8Q02793 397 aaPredicted RBP3.12□□□□□ -1.91
CCL1YPR025C YMR010WQ03687 405 aa3.12□□□□□ -1.91
CCL1YPR025C SHS1Q07657 551 aa3.12□□□□□ -1.91
CCL1YPR025C ZRC1P20107 442 aa3.11□□□□□ -1.91
CCL1YPR025C DBR1P24309 405 aaKnown RBP3.11□□□□□ -1.91
CCL1YPR025C PTK1P36002 662 aaPredicted RBP3.11□□□□□ -1.91
CCL1YPR025C SLX1P38324 304 aa3.11□□□□□ -1.91
CCL1YPR025C CIN2P46670 268 aa3.11□□□□□ -1.91
CCL1YPR025C TRF5P48561 642 aaKnown RBP3.11□□□□□ -1.91
CCL1YPR025C MPS2P53159 387 aa3.11□□□□□ -1.91
CCL1YPR025C UTP6Q02354 440 aaKnown RBP3.11□□□□□ -1.91
CCL1YPR025C AIM33Q04516 312 aa3.11□□□□□ -1.91
CCL1YPR025C YHC1Q05900 231 aaKnown RBP3.11□□□□□ -1.91
CCL1YPR025C YLH47Q06493 454 aa3.11□□□□□ -1.91
CCL1YPR025C YOR012WQ12351 137 aa3.11□□□□□ -1.91
CCL1YPR025C SOD1P00445 154 aaKnown RBP3.1□□□□□ -1.91
CCL1YPR025C PRB1P09232 635 aa3.1□□□□□ -1.91
CCL1YPR025C EFB1P32471 206 aaKnown RBP3.1□□□□□ -1.91
CCL1YPR025C SSE1P32589 693 aaKnown RBP3.1□□□□□ -1.91
CCL1YPR025C CTK3P46963 296 aaPredicted RBP3.1□□□□□ -1.91
CCL1YPR025C FSH3Q99369 266 aa3.1□□□□□ -1.91
CCL1YPR025C COX4P04037 155 aa3.09□□□□□ -1.91
CCL1YPR025C MAS2P11914 482 aa3.09□□□□□ -1.91
CCL1YPR025C GIT1P25346 518 aa3.09□□□□□ -1.91
CCL1YPR025C CHA1P25379 360 aaKnown RBP3.09□□□□□ -1.91
CCL1YPR025C RDS1P25611 832 aa3.09□□□□□ -1.91
CCL1YPR025C POT1P27796 417 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
CCL1YPR025C GPI18P38211 433 aa3.09□□□□□ -1.91
CCL1YPR025C WSC4P38739 605 aa3.09□□□□□ -1.91
CCL1YPR025C SEC9P40357 651 aa3.09□□□□□ -1.91
CCL1YPR025C IGD1P43598 195 aa3.09□□□□□ -1.91
CCL1YPR025C KEG1P43614 200 aa3.09□□□□□ -1.91
CCL1YPR025C RPA34P47006 233 aaPredicted RBP3.09□□□□□ -1.91
CCL1YPR025C YNL143CP53908 130 aa3.09□□□□□ -1.91
CCL1YPR025C MRPS16Q02608 121 aa3.09□□□□□ -1.91
CCL1YPR025C MSC3Q05812 728 aa3.09□□□□□ -1.91
CCL1YPR025C DBP9Q06218 594 aaKnown RBP3.09□□□□□ -1.91
CCL1YPR025C YPR078CQ06813 372 aa3.09□□□□□ -1.91
CCL1YPR025C YOL075CQ08234 1294 aa3.09□□□□□ -1.91
CCL1YPR025C BSC6Q08280 497 aa3.09□□□□□ -1.91
CCL1YPR025C MCT1Q12283 360 aa3.09□□□□□ -1.91
CCL1YPR025C GLE1Q12315 538 aa3.09□□□□□ -1.91
CCL1YPR025C HMS1Q12398 434 aa3.09□□□□□ -1.91
CCL1YPR025C SFG1Q12507 346 aa3.09□□□□□ -1.91
CCL1YPR025C STE3P06783 470 aa3.08□□□□□ -1.92
CCL1YPR025C RPL16AP26784 199 aaKnown RBP3.08□□□□□ -1.92
CCL1YPR025C DEP1P31385 405 aa3.08□□□□□ -1.92
CCL1YPR025C MRP21P38175 177 aa3.08□□□□□ -1.92
CCL1YPR025C LSM12P38828 187 aaKnown RBP3.08□□□□□ -1.92
CCL1YPR025C AQR1P53943 586 aa3.08□□□□□ -1.92
CCL1YPR025C DET1Q99288 334 aaKnown RBP3.08□□□□□ -1.92
CCL1YPR025C HEM4P06174 275 aa3.07□□□□□ -1.92
CCL1YPR025C RPS16AP0CX51 143 aaKnown RBP3.07□□□□□ -1.92
CCL1YPR025C RPS16BP0CX52 143 aaKnown RBP3.07□□□□□ -1.92
CCL1YPR025C MAS1P10507 462 aa3.07□□□□□ -1.92
CCL1YPR025C THR4P16120 514 aaKnown RBP3.07□□□□□ -1.92
CCL1YPR025C CMK2P22517 447 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms