RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	HOT1	Q03213	719 aa		2.3	□□□□□ -2.04
RSA1	YPL193W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.3	□□□□□ -2.04	not detected
RSA1	YPL193W	RCN2	Q12044	265 aa		2.3	□□□□□ -2.04
RSA1	YPL193W	NFI1	Q12216	726 aa		2.3	□□□□□ -2.04
RSA1	YPL193W	RUD3	Q12234	484 aa	Known RBP	2.3	□□□□□ -2.04
RSA1	YPL193W	SEC39	Q12745	709 aa		2.3	□□□□□ -2.04
RSA1	YPL193W	RPL1A	P0CX43	217 aa	Known RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	RPL1B	P0CX44	217 aa	Known RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	ASP3-2	P0CX77	362 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	ASP3-3	P0CX78	362 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	ASP3-4	P0CX79	362 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	RPL19A	P0CX82	189 aa	Known RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	RPL19B	P0CX83	189 aa	Predicted RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	ASP3-1	P0CZ17	362 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.29	□□□□□ -2.04	not detected
RSA1	YPL193W	THR4	P16120	514 aa	Known RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	OM45	P16547	393 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.29	□□□□□ -2.04	not detected
RSA1	YPL193W	YCK1	P23291	538 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	NTG1	P31378	399 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	YEL043W	P32618	956 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	GYP6	P32806	458 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	TKL2	P33315	681 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	BMH2	P34730	273 aa	Known RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	LAS1	P36146	502 aa	Predicted RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	DAD2	P36162	133 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	GDT1	P38301	280 aa	Predicted RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	HSM3	P38348	480 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	PFS1	P38872	237 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	AVT2	P39981	480 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	HEM14	P40012	539 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	TIF34	P40217	347 aa	Known RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	PRM5	P40476	318 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	SPO22	P40511	975 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	LCB2	P40970	561 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	SSU1	P41930	458 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	MDE1	P47095	244 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	URB2	P47108	1174 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	NUP84	P52891	726 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	DUO1	P53168	247 aa	Known RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	POP6	P53218	158 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	IBD2	P53892	351 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	YSA1	Q01976	231 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	OAZ1	Q02803	292 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	YPL107W	Q02873	248 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	RRN5	Q02983	363 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	FUS2	Q05670	677 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	YLR345W	Q06137	509 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	YLR456W	Q06199	204 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	DBP9	Q06218	594 aa	Known RBP	2.29	□□□□□ -2.04
RSA1	YPL193W	YPR172W	Q06608	200 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	MUM3	Q08750	479 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	GPM2	Q12008	311 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	TAF10	Q12030	206 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	NMD4	Q12129	218 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	FRE6	Q12473	712 aa		2.29	□□□□□ -2.04
RSA1	YPL193W	MES1	P00958	751 aa	Known RBP	2.28	□□□□□ -2.04
RSA1	YPL193W	FRS2	P15625	503 aa	Known RBP	2.28	□□□□□ -2.04
RSA1	YPL193W	KAR3	P17119	729 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	GRR1	P24814	1151 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	CLB1	P24868	471 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	RRP7	P25368	297 aa	Predicted RBP	2.28	□□□□□ -2.04
RSA1	YPL193W	RAD51	P25454	400 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	YSC83	P32792	385 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	MRPL10	P36520	322 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	MSR1	P38714	643 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	OST1	P41543	476 aa	Known RBP	2.28	□□□□□ -2.04
RSA1	YPL193W	LCL3	P53153	274 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	ALF1	P53904	254 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	AQR1	P53943	586 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	ERB1	Q04660	807 aa	Known RBP	2.28	□□□□□ -2.04
RSA1	YPL193W	AIM32	Q04689	311 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	YPL199C	Q08954	240 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	YPL278C	Q08990	100 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	RTC5	Q12108	567 aa	Known RBP	2.28	□□□□□ -2.04
RSA1	YPL193W	YIL002W-A	Q3E7Z5	69 aa		2.28	□□□□□ -2.04
RSA1	YPL193W	YAR066W	P0CX18	203 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	YHR214W	P0CX19	203 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	RPL43A	P0CX25	92 aa	Known RBP	2.27	□□□□□ -2.05
RSA1	YPL193W	RPL43B	P0CX26	92 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	CLC1	P17891	233 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	CPR2	P23285	205 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	PHO84	P25297	587 aa	Known RBP	2.27	□□□□□ -2.05
RSA1	YPL193W	MSP1	P28737	362 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	STB6	P36085	766 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	TCM62	P38228	572 aa	Known RBP	2.27	□□□□□ -2.05
RSA1	YPL193W	SHE3	P38272	425 aa	Known RBP	2.27	□□□□□ -2.05
RSA1	YPL193W	ATG12	P38316	186 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	OTU2	P38747	307 aa	Known RBP	2.27	□□□□□ -2.05
RSA1	YPL193W	FHL1	P39521	936 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	MRX6	P48564	524 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	CUE3	P53137	624 aa	Known RBP	2.27	□□□□□ -2.05
RSA1	YPL193W	RPN14	P53196	417 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	YGR066C	P53242	292 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.27	□□□□□ -2.05	not detected
RSA1	YPL193W	IGO1	P53897	168 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	EGD1	Q02642	157 aa	Known RBP	2.27	□□□□□ -2.05
RSA1	YPL193W	RSN1	Q03516	953 aa		2.27	□□□□□ -2.05
RSA1	YPL193W	ATG38	Q05789	226 aa	Known RBP	2.27	□□□□□ -2.05
RSA1	YPL193W	MDY2	Q12285	212 aa		2.27	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms