RNA–Protein interactions for RNA: YPL083C

SEN54, Transcript of Subunit of the tRNA splicing endonuclease, yeast

Gene SEN54, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN54	YPL083C	ASI1	P54074	624 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	AIM33	Q04516	312 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	IVY1	Q04934	453 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	ASA1	Q06822	443 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	TLG2	Q08144	397 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	YOR365C	Q08844	703 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	TIP41	Q12199	356 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	PKH2	Q12236	1081 aa	Known RBP	2.59	□□□□□ -1.99
SEN54	YPL083C	GIS3	Q12418	502 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	FMP16	Q12497	93 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	RGS2	Q99188	309 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	BUD3	P25558	1636 aa		2.59	□□□□□ -1.99
SEN54	YPL083C	RPL24A	P04449	155 aa	Known RBP	2.59	□□□□□ -2
SEN54	YPL083C	RPL18A	P0CX49	186 aa	Known RBP	2.59	□□□□□ -2
SEN54	YPL083C	RPL18B	P0CX50	186 aa	Known RBP	2.59	□□□□□ -2
SEN54	YPL083C	CLN3	P13365	580 aa		2.59	□□□□□ -2
SEN54	YPL083C	CPR3	P25719	182 aa		2.59	□□□□□ -2
SEN54	YPL083C	SMY1	P32364	656 aa	Known RBP	2.59	□□□□□ -2
SEN54	YPL083C	HXT1	P32465	570 aa		2.59	□□□□□ -2
SEN54	YPL083C	RAD24	P32641	659 aa		2.59	□□□□□ -2
SEN54	YPL083C	PRS1	P32895	427 aa	Known RBP	2.59	□□□□□ -2
SEN54	YPL083C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.59	□□□□□ -2	not detected
SEN54	YPL083C	BMH2	P34730	273 aa	Known RBP	2.59	□□□□□ -2
SEN54	YPL083C	RPC25	P35718	212 aa		2.59	□□□□□ -2
SEN54	YPL083C	DOA1	P36037	715 aa		2.59	□□□□□ -2
SEN54	YPL083C	YKL071W	P36086	256 aa		2.59	□□□□□ -2
SEN54	YPL083C	FET3	P38993	636 aa		2.59	□□□□□ -2
SEN54	YPL083C	RCY1	P39531	840 aa		2.59	□□□□□ -2
SEN54	YPL083C	SCC4	P40090	624 aa		2.59	□□□□□ -2
SEN54	YPL083C	SPG5	P42933	373 aa		2.59	□□□□□ -2
SEN54	YPL083C	YJR154W	P47181	346 aa		2.59	□□□□□ -2
SEN54	YPL083C	YGR117C	P53270	476 aa		2.59	□□□□□ -2
SEN54	YPL083C	YGR168C	P53293	376 aa		2.59	□□□□□ -2
SEN54	YPL083C	GPI1	P53306	609 aa		2.59	□□□□□ -2
SEN54	YPL083C	SOL4	P53315	255 aa		2.59	□□□□□ -2
SEN54	YPL083C	YMR087W	Q04299	284 aa		2.59	□□□□□ -2
SEN54	YPL083C	APC4	Q04601	652 aa		2.59	□□□□□ -2
SEN54	YPL083C	GPN3	Q06543	272 aa		2.59	□□□□□ -2
SEN54	YPL083C	MDM36	Q06820	579 aa		2.59	□□□□□ -2
SEN54	YPL083C	DNL4	Q08387	944 aa	Predicted RBP	2.59	□□□□□ -2
SEN54	YPL083C	BUG1	Q12191	341 aa		2.59	□□□□□ -2
SEN54	YPL083C	RUP1	Q12242	671 aa		2.59	□□□□□ -2
SEN54	YPL083C	RNH203	Q12338	110 aa		2.59	□□□□□ -2
SEN54	YPL083C	RKM5	Q12367	367 aa		2.59	□□□□□ -2
SEN54	YPL083C	FSH3	Q99369	266 aa		2.59	□□□□□ -2
SEN54	YPL083C	SSK22	P25390	1331 aa	Predicted RBP	2.58	□□□□□ -2
SEN54	YPL083C	HIS4	P00815	799 aa	Known RBP	2.58	□□□□□ -2
SEN54	YPL083C	ARG80	P07249	177 aa		2.58	□□□□□ -2
SEN54	YPL083C	MRPL25	P23369	157 aa		2.58	□□□□□ -2
SEN54	YPL083C	YSR3	P23501	404 aa		2.58	□□□□□ -2
SEN54	YPL083C	GPI12	P23797	304 aa		2.58	□□□□□ -2
SEN54	YPL083C	COX13	P32799	129 aa		2.58	□□□□□ -2
SEN54	YPL083C	IMP3	P32899	183 aa	Predicted RBP	2.58	□□□□□ -2
SEN54	YPL083C	SKN1	P33336	771 aa		2.58	□□□□□ -2
SEN54	YPL083C	YKL097C	P34245	136 aa		2.58	□□□□□ -2
SEN54	YPL083C	ISC1	P40015	477 aa	Known RBP	2.58	□□□□□ -2
SEN54	YPL083C	RTR1	P40084	226 aa	Predicted RBP	2.58	□□□□□ -2
SEN54	YPL083C	YJL118W	P47022	219 aa		2.58	□□□□□ -2
SEN54	YPL083C	PMT5	P52867	743 aa		2.58	□□□□□ -2
SEN54	YPL083C	YNL260C	P53846	198 aa		2.58	□□□□□ -2
SEN54	YPL083C	MMT1	Q03218	510 aa		2.58	□□□□□ -2
SEN54	YPL083C	URC2	Q04411	772 aa		2.58	□□□□□ -2
SEN54	YPL083C	GLO2	Q05584	274 aa		2.58	□□□□□ -2
SEN54	YPL083C	DIC1	Q06143	298 aa		2.58	□□□□□ -2
SEN54	YPL083C	TSR1	Q07381	788 aa	Known RBP	2.58	□□□□□ -2
SEN54	YPL083C	BSC6	Q08280	497 aa		2.58	□□□□□ -2
SEN54	YPL083C	YDR262W	Q12331	272 aa		2.58	□□□□□ -2
SEN54	YPL083C	PAA1	Q12447	191 aa	Known RBP	2.58	□□□□□ -2
SEN54	YPL083C	ADF1	Q2V2Q1	113 aa		2.58	□□□□□ -2
SEN54	YPL083C	SPP41	P38904	1435 aa		2.57	□□□□□ -2
SEN54	YPL083C	TPK3	P05986	398 aa		2.57	□□□□□ -2
SEN54	YPL083C	RPL12A	P0CX53	165 aa	Known RBP	2.57	□□□□□ -2
SEN54	YPL083C	RPL12B	P0CX54	165 aa		2.57	□□□□□ -2
SEN54	YPL083C	PRR1	P28708	518 aa		2.57	□□□□□ -2
SEN54	YPL083C	SNC1	P31109	117 aa		2.57	□□□□□ -2
SEN54	YPL083C	SKG6	P32900	734 aa	Predicted RBP	2.57	□□□□□ -2
SEN54	YPL083C	YNK1	P36010	153 aa	Known RBP	2.57	□□□□□ -2
SEN54	YPL083C	YCR041W	P37265	110 aa		2.57	□□□□□ -2
SEN54	YPL083C	PEX32	P38292	413 aa		2.57	□□□□□ -2
SEN54	YPL083C	LYS12	P40495	371 aa	Known RBP	2.57	□□□□□ -2
SEN54	YPL083C	HXT9	P40885	567 aa		2.57	□□□□□ -2
SEN54	YPL083C	LOC1	P43586	204 aa	Predicted RBP	2.57	□□□□□ -2
SEN54	YPL083C	LOH1	P47055	219 aa		2.57	□□□□□ -2
SEN54	YPL083C	ARP10	Q04549	284 aa		2.57	□□□□□ -2
SEN54	YPL083C	BOP2	Q06150	570 aa		2.57	□□□□□ -2
SEN54	YPL083C	SHS1	Q07657	551 aa		2.57	□□□□□ -2
SEN54	YPL083C	LDS2	Q08218	356 aa		2.57	□□□□□ -2
SEN54	YPL083C	YPQ1	Q12010	308 aa		2.57	□□□□□ -2
SEN54	YPL083C	ARF1	P11076	181 aa	Known RBP	2.56	□□□□□ -2
SEN54	YPL083C	RPS2	P25443	254 aa	Known RBP	2.56	□□□□□ -2
SEN54	YPL083C	YCR016W	P25617	290 aa	Known RBP	2.56	□□□□□ -2
SEN54	YPL083C	UTR4	P32626	227 aa		2.56	□□□□□ -2
SEN54	YPL083C	MNS1	P32906	549 aa		2.56	□□□□□ -2
SEN54	YPL083C	MYO3	P36006	1272 aa		2.56	□□□□□ -2
SEN54	YPL083C	RSM22	P36056	628 aa		2.56	□□□□□ -2
SEN54	YPL083C	RIM2	P38127	377 aa		2.56	□□□□□ -2
SEN54	YPL083C	IML3	P38265	245 aa		2.56	□□□□□ -2
SEN54	YPL083C	SIP3	P38717	1229 aa		2.56	□□□□□ -2
SEN54	YPL083C	YER034W	P40022	185 aa	Known RBP	2.56	□□□□□ -2
SEN54	YPL083C	SHQ1	P40486	507 aa	Predicted RBP	2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms