RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C MDL1P33310 695 aa3.41□□□□□ -1.86
RPN8YOR261C SPO23P33757 523 aa3.41□□□□□ -1.86
RPN8YOR261C PFS1P38872 237 aa3.41□□□□□ -1.86
RPN8YOR261C YPS5P53057 165 aa3.41□□□□□ -1.86
RPN8YOR261C YHC1Q05900 231 aaKnown RBP3.41□□□□□ -1.86
RPN8YOR261C AAD15Q08361 143 aa3.41□□□□□ -1.86
RPN8YOR261C PCL9Q12477 304 aa3.41□□□□□ -1.86
RPN8YOR261C MEX67Q99257 599 aaKnown RBP3.41□□□□□ -1.86
RPN8YOR261C FAB1P34756 2278 aa3.41□□□□□ -1.86
RPN8YOR261C ADH1P00330 348 aaKnown RBP3.4□□□□□ -1.87
RPN8YOR261C DEP1P31385 405 aa3.4□□□□□ -1.87
RPN8YOR261C KAP104P38217 918 aaKnown RBP3.4□□□□□ -1.87
RPN8YOR261C SPP381P38282 291 aaPredicted RBP3.4□□□□□ -1.87
RPN8YOR261C GDI1P39958 451 aaKnown RBP3.4□□□□□ -1.87
RPN8YOR261C IGD1P43598 195 aa3.4□□□□□ -1.87
RPN8YOR261C AIP1P46680 615 aaKnown RBP3.4□□□□□ -1.87
RPN8YOR261C MKC7P53379 596 aa3.4□□□□□ -1.87
RPN8YOR261C VHS1Q03785 461 aa3.4□□□□□ -1.87
RPN8YOR261C SXM1Q04175 944 aaKnown RBP3.4□□□□□ -1.87
RPN8YOR261C YBL111CQ3E7Y5 667 aa3.4□□□□□ -1.87
RPN8YOR261C RPS18AP0CX55 146 aaKnown RBP3.39□□□□□ -1.87
RPN8YOR261C RPS18BP0CX56 146 aaPredicted RBP3.39□□□□□ -1.87
RPN8YOR261C GIT1P25346 518 aa3.39□□□□□ -1.87
RPN8YOR261C CHA1P25379 360 aaKnown RBP3.39□□□□□ -1.87
RPN8YOR261C PEX5P35056 612 aa3.39□□□□□ -1.87
RPN8YOR261C LSM12P38828 187 aaKnown RBP3.39□□□□□ -1.87
RPN8YOR261C CIN2P46670 268 aa3.39□□□□□ -1.87
RPN8YOR261C MLC1P53141 149 aa3.39□□□□□ -1.87
RPN8YOR261C MRPL27P36526 146 aaPredicted RBP3.38□□□□□ -1.87
RPN8YOR261C SEC27P41811 889 aaKnown RBP3.38□□□□□ -1.87
RPN8YOR261C REX2P54964 269 aaKnown RBP3.38□□□□□ -1.87
RPN8YOR261C TPS1Q00764 495 aaKnown RBP3.38□□□□□ -1.87
RPN8YOR261C ERO1Q03103 563 aa3.38□□□□□ -1.87
RPN8YOR261C SRN2Q99176 213 aa3.38□□□□□ -1.87
RPN8YOR261C SLX1P38324 304 aa3.37□□□□□ -1.87
RPN8YOR261C YGL262WP53054 175 aa3.37□□□□□ -1.87
RPN8YOR261C GAT3Q07928 141 aa3.37□□□□□ -1.87
RPN8YOR261C FOL3Q12676 427 aaPredicted RBP3.37□□□□□ -1.87
RPN8YOR261C STE7P06784 515 aa3.36□□□□□ -1.87
RPN8YOR261C ECT1P33412 323 aa3.36□□□□□ -1.87
RPN8YOR261C HEM14P40012 539 aa3.36□□□□□ -1.87
RPN8YOR261C CTK3P46963 296 aaPredicted RBP3.36□□□□□ -1.87
RPN8YOR261C SEH1P53011 349 aaKnown RBP3.36□□□□□ -1.87
RPN8YOR261C VHT1P53241 593 aa3.36□□□□□ -1.87
RPN8YOR261C MSC3Q05812 728 aa3.36□□□□□ -1.87
RPN8YOR261C YPQ1Q12010 308 aa3.36□□□□□ -1.87
RPN8YOR261C MRPS9P38120 278 aa3.35□□□□□ -1.87
RPN8YOR261C SEC28P40509 296 aaKnown RBP3.35□□□□□ -1.87
RPN8YOR261C EPL1P43572 832 aa3.35□□□□□ -1.87
RPN8YOR261C TRF5P48561 642 aaKnown RBP3.35□□□□□ -1.87
RPN8YOR261C PRP38Q00723 242 aaPredicted RBP3.35□□□□□ -1.87
RPN8YOR261C YFH1Q07540 174 aa3.35□□□□□ -1.87
RPN8YOR261C MRPL8P22353 238 aa3.34□□□□□ -1.87
RPN8YOR261C CMK2P22517 447 aa3.34□□□□□ -1.87
RPN8YOR261C PUP2P32379 260 aa3.34□□□□□ -1.87
RPN8YOR261C JEM1P40358 645 aa3.34□□□□□ -1.87
RPN8YOR261C VAC7P53950 1165 aa3.34□□□□□ -1.87
RPN8YOR261C KTR6P54070 446 aa3.34□□□□□ -1.87
RPN8YOR261C ENT5Q03769 411 aaKnown RBP3.34□□□□□ -1.87
RPN8YOR261C SFM1Q12314 213 aa3.34□□□□□ -1.87
RPN8YOR261C YOR338WQ99326 363 aa3.34□□□□□ -1.87
RPN8YOR261C MSP1P28737 362 aa3.33□□□□□ -1.88
RPN8YOR261C ANP1P32629 500 aa3.33□□□□□ -1.88
RPN8YOR261C YLR177WQ06251 628 aa3.33□□□□□ -1.88
RPN8YOR261C PIN3Q06449 215 aa3.33□□□□□ -1.88
RPN8YOR261C HEM4P06174 275 aa3.32□□□□□ -1.88
RPN8YOR261C RET3P53600 189 aa3.32□□□□□ -1.88
RPN8YOR261C RPL21AQ02753 160 aaKnown RBP3.32□□□□□ -1.88
RPN8YOR261C RNY1Q02933 434 aaKnown RBP3.32□□□□□ -1.88
RPN8YOR261C ECM11Q04110 302 aa3.32□□□□□ -1.88
RPN8YOR261C YLH47Q06493 454 aa3.32□□□□□ -1.88
RPN8YOR261C YPR078CQ06813 372 aa3.32□□□□□ -1.88
RPN8YOR261C HMS1Q12398 434 aa3.32□□□□□ -1.88
RPN8YOR261C RPL21BQ12672 160 aaKnown RBP3.32□□□□□ -1.88
RPN8YOR261C DAP2P18962 818 aa3.31□□□□□ -1.88
RPN8YOR261C PSO2P30620 661 aa3.31□□□□□ -1.88
RPN8YOR261C TOA1P32773 286 aa3.31□□□□□ -1.88
RPN8YOR261C SOL2P37262 315 aa3.31□□□□□ -1.88
RPN8YOR261C YDR061WQ12298 539 aa3.31□□□□□ -1.88
RPN8YOR261C TPI1P00942 248 aaKnown RBP3.3□□□□□ -1.88
RPN8YOR261C RPL6BP05739 176 aaKnown RBP3.3□□□□□ -1.88
RPN8YOR261C MAS2P11914 482 aa3.3□□□□□ -1.88
RPN8YOR261C RPL16AP26784 199 aaKnown RBP3.3□□□□□ -1.88
RPN8YOR261C ZUO1P32527 433 aaKnown RBP3.3□□□□□ -1.88
RPN8YOR261C PDC2P32896 925 aa3.3□□□□□ -1.88
RPN8YOR261C VAM7P32912 316 aa3.3□□□□□ -1.88
RPN8YOR261C YSW1P38280 609 aa3.3□□□□□ -1.88
RPN8YOR261C WSS1P38838 269 aa3.3□□□□□ -1.88
RPN8YOR261C PEX22P39718 180 aa3.3□□□□□ -1.88
RPN8YOR261C LYS12P40495 371 aaKnown RBP3.3□□□□□ -1.88
RPN8YOR261C RPL6AQ02326 176 aaKnown RBP3.3□□□□□ -1.88
RPN8YOR261C SHS1Q07657 551 aa3.3□□□□□ -1.88
RPN8YOR261C YDL109CQ12103 647 aa3.3□□□□□ -1.88
RPN8YOR261C ATP16Q12165 160 aa3.3□□□□□ -1.88
RPN8YOR261C HIF1Q12373 385 aa3.3□□□□□ -1.88
RPN8YOR261C SKS1Q12505 502 aa3.3□□□□□ -1.88
RPN8YOR261C RPL23AP0CX41 137 aaKnown RBP3.29□□□□□ -1.88
RPN8YOR261C RPL23BP0CX42 137 aaKnown RBP3.29□□□□□ -1.88
RPN8YOR261C FAA1P30624 700 aaKnown RBP3.29□□□□□ -1.88
RPN8YOR261C LDS1P31379 325 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms