RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W JHD2P47156 728 aaPredicted RBP3.58□□□□□ -1.84
ROD1YOR018W ARI1P53111 347 aaKnown RBP3.58□□□□□ -1.84
ROD1YOR018W YNR068CP53754 272 aa3.58□□□□□ -1.84
ROD1YOR018W YMR226CQ05016 267 aaKnown RBP3.58□□□□□ -1.84
ROD1YOR018W BNA5Q05979 453 aa3.58□□□□□ -1.84
ROD1YOR018W GIC2Q06648 383 aa3.58□□□□□ -1.84
ROD1YOR018W CDA2Q06703 312 aa3.58□□□□□ -1.84
ROD1YOR018W CYR1P08678 2026 aaKnown RBP3.57□□□□□ -1.84
ROD1YOR018W ATR1P13090 542 aa3.57□□□□□ -1.84
ROD1YOR018W RPS1BP23248 255 aaKnown RBP3.57□□□□□ -1.84
ROD1YOR018W GRR1P24814 1151 aa3.57□□□□□ -1.84
ROD1YOR018W DMC1P25453 334 aa3.57□□□□□ -1.84
ROD1YOR018W YBR241CP38142 488 aa3.57□□□□□ -1.84
ROD1YOR018W PAC10P48363 199 aa3.57□□□□□ -1.84
ROD1YOR018W PRM8P53174 237 aa3.57□□□□□ -1.84
ROD1YOR018W MEP3P53390 489 aa3.57□□□□□ -1.84
ROD1YOR018W OAZ1Q02803 292 aa3.57□□□□□ -1.84
ROD1YOR018W YDR239CQ03780 787 aa3.57□□□□□ -1.84
ROD1YOR018W SPO77Q06134 477 aa3.57□□□□□ -1.84
ROD1YOR018W YRM1Q12340 786 aa3.57□□□□□ -1.84
ROD1YOR018W BRR1Q99177 341 aaPredicted RBP3.57□□□□□ -1.84
ROD1YOR018W STE7P06784 515 aa3.56□□□□□ -1.84
ROD1YOR018W PET9P18239 318 aaKnown RBP3.56□□□□□ -1.84
ROD1YOR018W PRP2P20095 876 aaPredicted RBP3.56□□□□□ -1.84
ROD1YOR018W MCK1P21965 375 aaKnown RBP3.56□□□□□ -1.84
ROD1YOR018W IMG1P25626 169 aa3.56□□□□□ -1.84
ROD1YOR018W ZTA1P38230 334 aaKnown RBP3.56□□□□□ -1.84
ROD1YOR018W TDA11P38854 504 aa3.56□□□□□ -1.84
ROD1YOR018W GID8P40208 455 aa3.56□□□□□ -1.84
ROD1YOR018W MPA43P53583 542 aaPredicted RBP3.56□□□□□ -1.84
ROD1YOR018W DSL1P53847 754 aa3.56□□□□□ -1.84
ROD1YOR018W YDR541CQ03049 344 aa3.56□□□□□ -1.84
ROD1YOR018W SMP3Q04174 516 aa3.56□□□□□ -1.84
ROD1YOR018W YKU80Q04437 629 aa3.56□□□□□ -1.84
ROD1YOR018W YMR310CQ04867 317 aaPredicted RBP3.56□□□□□ -1.84
ROD1YOR018W COS7Q07788 383 aa3.56□□□□□ -1.84
ROD1YOR018W PSR1Q07800 427 aa3.56□□□□□ -1.84
ROD1YOR018W BSC6Q08280 497 aa3.56□□□□□ -1.84
ROD1YOR018W NFI1Q12216 726 aa3.56□□□□□ -1.84
ROD1YOR018W SKM1Q12469 655 aa3.56□□□□□ -1.84
ROD1YOR018W YOR019WQ99248 730 aa3.56□□□□□ -1.84
ROD1YOR018W FAS1P07149 2051 aaKnown RBP3.56□□□□□ -1.84
ROD1YOR018W GPI12P23797 304 aa3.56□□□□□ -1.84
ROD1YOR018W CLB4P24871 460 aa3.56□□□□□ -1.84
ROD1YOR018W TAH1P25638 111 aaPredicted RBP3.56□□□□□ -1.84
ROD1YOR018W IDH1P28834 360 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
ROD1YOR018W YME2P32843 850 aa3.56□□□□□ -1.84
ROD1YOR018W TIF3P34167 436 aaKnown RBP3.56□□□□□ -1.84
ROD1YOR018W MAE1P36013 669 aaKnown RBP3.56□□□□□ -1.84
ROD1YOR018W YBR238CP38330 731 aaKnown RBP3.56□□□□□ -1.84
ROD1YOR018W YIL086CP40503 102 aa3.56□□□□□ -1.84
ROD1YOR018W BAP3P41815 604 aa3.56□□□□□ -1.84
ROD1YOR018W DAM1P53267 343 aa3.56□□□□□ -1.84
ROD1YOR018W YGR266WP53326 701 aa3.56□□□□□ -1.84
ROD1YOR018W GOR1P53839 350 aa3.56□□□□□ -1.84
ROD1YOR018W YLR456WQ06199 204 aa3.56□□□□□ -1.84
ROD1YOR018W XYL2Q07993 356 aa3.56□□□□□ -1.84
ROD1YOR018W SKI7Q08491 747 aaPredicted RBP3.56□□□□□ -1.84
ROD1YOR018W GET4Q12125 312 aa3.56□□□□□ -1.84
ROD1YOR018W YPR071WQ12346 211 aa3.56□□□□□ -1.84
ROD1YOR018W RPS21BQ3E754 87 aaKnown RBP3.56□□□□□ -1.84
ROD1YOR018W YOL159C-AQ3E769 90 aa3.56□□□□□ -1.84
ROD1YOR018W LAG2Q92325 660 aa3.56□□□□□ -1.84
ROD1YOR018W GAL4P04386 881 aa3.55□□□□□ -1.84
ROD1YOR018W YMC1P32331 307 aa3.55□□□□□ -1.84
ROD1YOR018W ECM8P38246 354 aa3.55□□□□□ -1.84
ROD1YOR018W PSA1P41940 361 aaKnown RBP3.55□□□□□ -1.84
ROD1YOR018W SNO3P43544 222 aa3.55□□□□□ -1.84
ROD1YOR018W UBC9P50623 157 aaPredicted RBP3.55□□□□□ -1.84
ROD1YOR018W SHE4P51534 789 aa3.55□□□□□ -1.84
ROD1YOR018W BUD9P53226 547 aa3.55□□□□□ -1.84
ROD1YOR018W YAT1P80235 687 aa3.55□□□□□ -1.84
ROD1YOR018W TRS23Q03784 219 aa3.55□□□□□ -1.84
ROD1YOR018W RAD30Q04049 632 aa3.55□□□□□ -1.84
ROD1YOR018W NAT4Q04751 285 aa3.55□□□□□ -1.84
ROD1YOR018W VPS36Q06696 566 aa3.55□□□□□ -1.84
ROD1YOR018W GUP2Q08929 609 aa3.55□□□□□ -1.84
ROD1YOR018W STP22P25604 385 aa3.55□□□□□ -1.84
ROD1YOR018W CTS1P29029 562 aa3.55□□□□□ -1.84
ROD1YOR018W SRB5P32585 307 aa3.55□□□□□ -1.84
ROD1YOR018W ATG14P38270 344 aa3.55□□□□□ -1.84
ROD1YOR018W RTC2P38279 296 aa3.55□□□□□ -1.84
ROD1YOR018W ANS1P38832 159 aa3.55□□□□□ -1.84
ROD1YOR018W YFR054CP43622 192 aa3.55□□□□□ -1.84
ROD1YOR018W KRE28Q04431 385 aa3.55□□□□□ -1.84
ROD1YOR018W RNH202Q05635 350 aa3.55□□□□□ -1.84
ROD1YOR018W IRC13Q08630 104 aa3.55□□□□□ -1.84
ROD1YOR018W PUS9Q12069 462 aa3.55□□□□□ -1.84
ROD1YOR018W YIL046W-AQ3E7Z4 54 aa3.55□□□□□ -1.84
ROD1YOR018W MDM35O60200 86 aa3.54□□□□□ -1.84
ROD1YOR018W CDC9P04819 755 aa3.54□□□□□ -1.84
ROD1YOR018W PUT2P07275 575 aa3.54□□□□□ -1.84
ROD1YOR018W MET2P08465 486 aa3.54□□□□□ -1.84
ROD1YOR018W SAM35P14693 329 aa3.54□□□□□ -1.84
ROD1YOR018W CLB3P24870 427 aa3.54□□□□□ -1.84
ROD1YOR018W PCL2P25693 308 aa3.54□□□□□ -1.84
ROD1YOR018W SPC29P33419 253 aa3.54□□□□□ -1.84
ROD1YOR018W FES1P38260 290 aa3.54□□□□□ -1.84
ROD1YOR018W YBR138CP38277 524 aa3.54□□□□□ -1.84
ROD1YOR018W BIG1P38813 335 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms