RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR4	YOR009W	YHR097C	P38809	366 aa	Known RBP	11.22	□□□□□ -0.61
TIR4	YOR009W	IPT1	P38954	527 aa		11.22	□□□□□ -0.61
TIR4	YOR009W	KRE29	P40026	464 aa		11.22	□□□□□ -0.61
TIR4	YOR009W	SWP82	P43554	623 aa		11.22	□□□□□ -0.61
TIR4	YOR009W	ALB1	P47019	175 aa	Predicted RBP	11.22	□□□□□ -0.61
TIR4	YOR009W	NAM8	Q00539	523 aa	Known RBP	11.22	□□□□□ -0.61
TIR4	YOR009W	YPR172W	Q06608	200 aa		11.22	□□□□□ -0.61
TIR4	YOR009W	SKI7	Q08491	747 aa	Predicted RBP	11.22	□□□□□ -0.61
TIR4	YOR009W	YDL211C	Q12121	372 aa		11.22	□□□□□ -0.61
TIR4	YOR009W	YGK3	Q12222	375 aa	Predicted RBP	11.22	□□□□□ -0.61
TIR4	YOR009W	ACC1	Q00955	2233 aa	Known RBP	11.22	□□□□□ -0.61
TIR4	YOR009W	SAM35	P14693	329 aa		11.21	□□□□□ -0.61
TIR4	YOR009W	PRP19	P32523	503 aa	Known RBP	11.21	□□□□□ -0.61
TIR4	YOR009W	KAP122	P32767	1081 aa		11.21	□□□□□ -0.61
TIR4	YOR009W	TOD6	P34219	525 aa		11.21	□□□□□ -0.61
TIR4	YOR009W	RIX1	P38883	763 aa	Predicted RBP	11.21	□□□□□ -0.61
TIR4	YOR009W	ICE2	P40499	491 aa		11.21	□□□□□ -0.61
TIR4	YOR009W	RNH70	P53331	553 aa		11.21	□□□□□ -0.61
TIR4	YOR009W	ARV1	Q06541	321 aa		11.21	□□□□□ -0.61
TIR4	YOR009W	MET17	P06106	444 aa		11.2	□□□□□ -0.62
TIR4	YOR009W	TFS1	P14306	219 aa		11.2	□□□□□ -0.62
TIR4	YOR009W	GPI12	P23797	304 aa		11.2	□□□□□ -0.62
TIR4	YOR009W	RPL5	P26321	297 aa	Known RBP	11.2	□□□□□ -0.62
TIR4	YOR009W	ITR2	P30606	609 aa		11.2	□□□□□ -0.62
TIR4	YOR009W	VMA6	P32366	345 aa	Known RBP	11.2	□□□□□ -0.62
TIR4	YOR009W	LYP1	P32487	611 aa		11.2	□□□□□ -0.62
TIR4	YOR009W	HBS1	P32769	611 aa	Known RBP	11.2	□□□□□ -0.62
TIR4	YOR009W	MAE1	P36013	669 aa	Known RBP	11.2	□□□□□ -0.62
TIR4	YOR009W	YLF2	P38746	405 aa		11.2	□□□□□ -0.62
TIR4	YOR009W	YEL068C	P39977	110 aa		11.2	□□□□□ -0.62
TIR4	YOR009W	QRI7	P43122	407 aa		11.2	□□□□□ -0.62
TIR4	YOR009W	EMG1	Q06287	252 aa	Known RBP	11.2	□□□□□ -0.62
TIR4	YOR009W	TRM10	Q12400	293 aa		11.2	□□□□□ -0.62
TIR4	YOR009W	SAC7	P17121	654 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	ASF2	P32448	525 aa	Predicted RBP	11.19	□□□□□ -0.62
TIR4	YOR009W	SEC61	P32915	480 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	SBE22	P38814	852 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	YHR210C	P38893	341 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	SMK1	P41808	388 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	YSA1	Q01976	231 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	ABZ2	Q03266	374 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	YPR015C	Q12531	247 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	FAS1	P07149	2051 aa	Known RBP	11.19	□□□□□ -0.62
TIR4	YOR009W	CAR2	P07991	424 aa	Known RBP	11.19	□□□□□ -0.62
TIR4	YOR009W	BAR1	P12630	587 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	FAA1	P30624	700 aa	Known RBP	11.19	□□□□□ -0.62
TIR4	YOR009W	ARC19	P33204	171 aa	Known RBP	11.19	□□□□□ -0.62
TIR4	YOR009W	ECM4	P36156	370 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	SNP1	Q00916	300 aa	Predicted RBP	11.19	□□□□□ -0.62
TIR4	YOR009W	GSH2	Q08220	491 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	CRT10	Q08226	957 aa		11.19	□□□□□ -0.62
TIR4	YOR009W	IRA2	P19158	3079 aa		11.18	□□□□□ -0.62
TIR4	YOR009W	ENA1	P13587	1091 aa		11.18	□□□□□ -0.62
TIR4	YOR009W	YCR100C	P25606	316 aa		11.18	□□□□□ -0.62
TIR4	YOR009W	ALP1	P38971	573 aa		11.18	□□□□□ -0.62
TIR4	YOR009W	PAC1	P39946	494 aa	Known RBP	11.18	□□□□□ -0.62
TIR4	YOR009W	BAT2	P47176	376 aa	Known RBP	11.18	□□□□□ -0.62
TIR4	YOR009W	YGR067C	P53243	804 aa		11.18	□□□□□ -0.62
TIR4	YOR009W	ENA2	Q01896	1091 aa		11.18	□□□□□ -0.62
TIR4	YOR009W	ENA5	Q12691	1091 aa		11.18	□□□□□ -0.62
TIR4	YOR009W	HO	P09932	586 aa		11.17	□□□□□ -0.62
TIR4	YOR009W	RPL20A	P0CX23	172 aa	Known RBP	11.17	□□□□□ -0.62
TIR4	YOR009W	RPL20B	P0CX24	172 aa	Predicted RBP	11.17	□□□□□ -0.62
TIR4	YOR009W	DAL82	P21705	255 aa		11.17	□□□□□ -0.62
TIR4	YOR009W	RPS5	P26783	225 aa	Known RBP	11.17	□□□□□ -0.62
TIR4	YOR009W	DCG1	P32460	244 aa		11.17	□□□□□ -0.62
TIR4	YOR009W	HIR2	P32480	875 aa		11.17	□□□□□ -0.62
TIR4	YOR009W	OCA5	P38738	679 aa		11.17	□□□□□ -0.62
TIR4	YOR009W	GCN20	P43535	752 aa	Known RBP	11.17	□□□□□ -0.62
TIR4	YOR009W	CHA4	P43634	648 aa		11.17	□□□□□ -0.62
TIR4	YOR009W	DBP6	P53734	629 aa	Known RBP	11.17	□□□□□ -0.62
TIR4	YOR009W	CDA2	Q06703	312 aa		11.17	□□□□□ -0.62
TIR4	YOR009W	NBA1	Q08229	501 aa	Known RBP	11.17	□□□□□ -0.62
TIR4	YOR009W	SIA1	Q12212	622 aa		11.17	□□□□□ -0.62
TIR4	YOR009W	YOR214C	Q12282	236 aa		11.17	□□□□□ -0.62
TIR4	YOR009W	OAC1	P32332	324 aa		11.16	□□□□□ -0.62
TIR4	YOR009W	SEA4	P38164	1038 aa		11.16	□□□□□ -0.62
TIR4	YOR009W	ALR2	P43553	858 aa		11.16	□□□□□ -0.62
TIR4	YOR009W	RET2	P43621	546 aa		11.16	□□□□□ -0.62
TIR4	YOR009W	EXG2	P52911	562 aa		11.16	□□□□□ -0.62
TIR4	YOR009W	MPA43	P53583	542 aa	Predicted RBP	11.16	□□□□□ -0.62
TIR4	YOR009W	COS1	P53822	381 aa		11.16	□□□□□ -0.62
TIR4	YOR009W	YKR011C	Q02209	353 aa		11.16	□□□□□ -0.62
TIR4	YOR009W	NTG2	Q08214	380 aa		11.16	□□□□□ -0.62
TIR4	YOR009W	YOL073C	Q08232	322 aa		11.16	□□□□□ -0.62
TIR4	YOR009W	PSF1	Q12488	208 aa		11.16	□□□□□ -0.62
TIR4	YOR009W	AI1	P03875	834 aa		11.15	□□□□□ -0.62
TIR4	YOR009W	YSF3	P0C074	85 aa	Predicted RBP	11.15	□□□□□ -0.62
TIR4	YOR009W	YOL162W	P0CF19	215 aa		11.15	□□□□□ -0.62
TIR4	YOR009W	MKK2	P32491	506 aa		11.15	□□□□□ -0.62
TIR4	YOR009W	PEX18	P38855	283 aa		11.15	□□□□□ -0.62
TIR4	YOR009W	VPS52	P39904	641 aa		11.15	□□□□□ -0.62
TIR4	YOR009W	APS3	P47064	194 aa		11.15	□□□□□ -0.62
TIR4	YOR009W	YJR141W	P47172	347 aa	Predicted RBP	11.15	□□□□□ -0.62
TIR4	YOR009W	SPT20	P50875	604 aa		11.15	□□□□□ -0.62
TIR4	YOR009W	PRP3	Q03338	469 aa	Predicted RBP	11.15	□□□□□ -0.62
TIR4	YOR009W	TPP1	Q03796	238 aa		11.15	□□□□□ -0.62
TIR4	YOR009W	ARP10	Q04549	284 aa		11.15	□□□□□ -0.62
TIR4	YOR009W	ELP6	Q04868	273 aa		11.15	□□□□□ -0.62
TIR4	YOR009W	YLR446W	Q06204	433 aa		11.15	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms