RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W KAR9P32526 644 aa4.37□□□□□ -1.71
RRP40YOL142W RAD5P32849 1169 aaPredicted RBP4.37□□□□□ -1.71
RRP40YOL142W PMT1P33775 817 aa4.37□□□□□ -1.71
RRP40YOL142W CMC1P36064 111 aa4.37□□□□□ -1.71
RRP40YOL142W YEL028WP39989 153 aa4.37□□□□□ -1.71
RRP40YOL142W MET18P40469 1032 aa4.37□□□□□ -1.71
RRP40YOL142W ERG10P41338 398 aaKnown RBP4.37□□□□□ -1.71
RRP40YOL142W GCD10P41814 478 aa4.37□□□□□ -1.71
RRP40YOL142W YNL320WP42840 284 aa4.37□□□□□ -1.71
RRP40YOL142W SPG5P42933 373 aa4.37□□□□□ -1.71
RRP40YOL142W DLD2P46681 530 aaKnown RBP4.37□□□□□ -1.71
RRP40YOL142W PRP24P49960 444 aaKnown RBP4.37□□□□□ -1.71
RRP40YOL142W VEL1P53058 206 aa4.37□□□□□ -1.71
RRP40YOL142W YGL108CP53139 140 aa4.37□□□□□ -1.71
RRP40YOL142W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
RRP40YOL142W NSE1Q07913 336 aa4.37□□□□□ -1.71
RRP40YOL142W YLR012CQ07927 99 aa4.37□□□□□ -1.71
RRP40YOL142W IMA3P0CW40 589 aa4.36□□□□□ -1.71
RRP40YOL142W IMA4P0CW41 589 aa4.36□□□□□ -1.71
RRP40YOL142W CPR1P14832 162 aaKnown RBP4.36□□□□□ -1.71
RRP40YOL142W SEC66P33754 206 aa4.36□□□□□ -1.71
RRP40YOL142W RSM22P36056 628 aa4.36□□□□□ -1.71
RRP40YOL142W BYE1P36106 594 aa4.36□□□□□ -1.71
RRP40YOL142W VHC1P38329 1120 aa4.36□□□□□ -1.71
RRP40YOL142W OTU2P38747 307 aaKnown RBP4.36□□□□□ -1.71
RRP40YOL142W ARF3P40994 183 aaRIP-Chip data4.36□□□□□ -1.71not detected
RRP40YOL142W AVT4P50944 713 aa4.36□□□□□ -1.71
RRP40YOL142W UTP6Q02354 440 aaKnown RBP4.36□□□□□ -1.71
RRP40YOL142W PIR1Q03178 341 aa4.36□□□□□ -1.71
RRP40YOL142W SWC7Q06707 132 aa4.36□□□□□ -1.71
RRP40YOL142W NOP6Q07623 225 aaKnown RBP4.36□□□□□ -1.71
RRP40YOL142W IMA2Q08295 589 aa4.36□□□□□ -1.71
RRP40YOL142W RIO1Q12196 484 aaKnown RBP4.36□□□□□ -1.71
RRP40YOL142W YLR046CQ12253 270 aa4.36□□□□□ -1.71
RRP40YOL142W EFG1Q3E705 233 aaKnown RBP4.36□□□□□ -1.71
RRP40YOL142W YER078W-AQ3E7A2 54 aa4.36□□□□□ -1.71
RRP40YOL142W AFI1Q99222 893 aa4.36□□□□□ -1.71
RRP40YOL142W COX5AP00424 153 aa4.35□□□□□ -1.71
RRP40YOL142W LEU4P06208 619 aaKnown RBP4.35□□□□□ -1.71
RRP40YOL142W ARF2P19146 181 aaKnown RBP4.35□□□□□ -1.71
RRP40YOL142W FPR1P20081 114 aaKnown RBP4.35□□□□□ -1.71
RRP40YOL142W RPO26P20435 155 aa4.35□□□□□ -1.71
RRP40YOL142W GEX1P25596 615 aa4.35□□□□□ -1.71
RRP40YOL142W TPS2P31688 896 aaKnown RBP4.35□□□□□ -1.71
RRP40YOL142W NDI1P32340 513 aa4.35□□□□□ -1.71
RRP40YOL142W ASN2P49090 572 aaKnown RBP4.35□□□□□ -1.71
RRP40YOL142W VPS60Q03390 229 aa4.35□□□□□ -1.71
RRP40YOL142W ENT5Q03769 411 aaKnown RBP4.35□□□□□ -1.71
RRP40YOL142W RRB1Q04225 511 aaKnown RBP4.35□□□□□ -1.71
RRP40YOL142W CLP1Q08685 445 aaPredicted RBP4.35□□□□□ -1.71
RRP40YOL142W ACC1Q00955 2233 aaKnown RBP4.35□□□□□ -1.71
RRP40YOL142W HEM15P16622 393 aa4.34□□□□□ -1.71
RRP40YOL142W MRPL8P22353 238 aa4.34□□□□□ -1.71
RRP40YOL142W RRP1P35178 278 aaPredicted RBP4.34□□□□□ -1.71
RRP40YOL142W MRPL40P36534 297 aa4.34□□□□□ -1.71
RRP40YOL142W CBP4P37267 147 aa4.34□□□□□ -1.71
RRP40YOL142W POP4P38336 279 aa4.34□□□□□ -1.71
RRP40YOL142W ISC1P40015 477 aaKnown RBP4.34□□□□□ -1.71
RRP40YOL142W SCC4P40090 624 aa4.34□□□□□ -1.71
RRP40YOL142W HXT14P42833 540 aa4.34□□□□□ -1.71
RRP40YOL142W IRC6P43615 237 aa4.34□□□□□ -1.71
RRP40YOL142W AIM23P47015 356 aa4.34□□□□□ -1.71
RRP40YOL142W TRF5P48561 642 aaKnown RBP4.34□□□□□ -1.71
RRP40YOL142W FLC3P53121 802 aa4.34□□□□□ -1.71
RRP40YOL142W ART5P53244 586 aaKnown RBP4.34□□□□□ -1.71
RRP40YOL142W OGG1P53397 376 aaPredicted RBP4.34□□□□□ -1.71
RRP40YOL142W CAF40P53829 373 aa4.34□□□□□ -1.71
RRP40YOL142W CMS1Q07897 291 aaKnown RBP4.34□□□□□ -1.71
RRP40YOL142W AAD15Q08361 143 aa4.34□□□□□ -1.71
RRP40YOL142W PER33Q12144 273 aa4.34□□□□□ -1.71
RRP40YOL142W PEX11Q12462 236 aa4.34□□□□□ -1.71
RRP40YOL142W SEY1Q99287 776 aa4.34□□□□□ -1.71
RRP40YOL142W QCR6P00127 147 aa4.33□□□□□ -1.72
RRP40YOL142W SEC63P14906 663 aa4.33□□□□□ -1.72
RRP40YOL142W CBF1P17106 351 aa4.33□□□□□ -1.72
RRP40YOL142W CLN1P20437 546 aa4.33□□□□□ -1.72
RRP40YOL142W DAL81P21657 970 aa4.33□□□□□ -1.72
RRP40YOL142W SPB1P25582 841 aaPredicted RBP4.33□□□□□ -1.72
RRP40YOL142W MGT1P26188 188 aa4.33□□□□□ -1.72
RRP40YOL142W GLC7P32598 312 aaKnown RBP4.33□□□□□ -1.72
RRP40YOL142W UBC6P33296 250 aaPredicted RBP4.33□□□□□ -1.72
RRP40YOL142W BUD13P46947 266 aaPredicted RBP4.33□□□□□ -1.72
RRP40YOL142W TIM13P53299 105 aa4.33□□□□□ -1.72
RRP40YOL142W PRM1P53835 661 aa4.33□□□□□ -1.72
RRP40YOL142W SLD7Q08457 257 aa4.33□□□□□ -1.72
RRP40YOL142W PGC1Q08959 321 aa4.33□□□□□ -1.72
RRP40YOL142W POL2P21951 2222 aaKnown RBP4.32□□□□□ -1.72
RRP40YOL142W CDC8P00572 216 aa4.32□□□□□ -1.72
RRP40YOL142W RHO2P06781 192 aa4.32□□□□□ -1.72
RRP40YOL142W MSF1P08425 469 aa4.32□□□□□ -1.72
RRP40YOL142W ATP10P18496 279 aa4.32□□□□□ -1.72
RRP40YOL142W RAD14P28519 371 aa4.32□□□□□ -1.72
RRP40YOL142W AFG1P32317 509 aa4.32□□□□□ -1.72
RRP40YOL142W SMI1P32566 505 aa4.32□□□□□ -1.72
RRP40YOL142W LAS1P36146 502 aaPredicted RBP4.32□□□□□ -1.72
RRP40YOL142W THI2P38141 450 aa4.32□□□□□ -1.72
RRP40YOL142W UTP9P38882 575 aaKnown RBP4.32□□□□□ -1.72
RRP40YOL142W OSW5P40219 148 aa4.32□□□□□ -1.72
RRP40YOL142W MIC19P43594 170 aa4.32□□□□□ -1.72
RRP40YOL142W YGR149WP48236 432 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms