RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	MRH4	P53166	561 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	CWC25	P53854	179 aa	Known RBP	4.06	□□□□□ -1.76
TRF5	YNL299W	YMR010W	Q03687	405 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	RPN9	Q04062	393 aa	Known RBP	4.06	□□□□□ -1.76
TRF5	YNL299W	AIM32	Q04689	311 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	HRD3	Q05787	833 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	YLR345W	Q06137	509 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	GRS2	Q06817	618 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	NUS1	Q12063	375 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	MLH3	Q12083	715 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	YDL109C	Q12103	647 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	YPR1	Q12458	312 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	DFG16	Q99234	619 aa		4.06	□□□□□ -1.76
TRF5	YNL299W	GRR1	P24814	1151 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	ATG22	P25568	528 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	PGS1	P25578	521 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	PEX34	P25584	144 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	YCR099C	P25657	155 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	PRE2	P30656	287 aa	Known RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	COX13	P32799	129 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	DHR2	P36009	735 aa	Predicted RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	POL12	P38121	705 aa	Predicted RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	UBS1	P38290	277 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	SRP72	P38688	640 aa	Known RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	DDI1	P40087	428 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	ELO3	P40319	345 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	IRC18	P47056	224 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	SNX4	P47057	423 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	VPS25	P47142	202 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	YPT32	P51996	222 aa	Known RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	COS12	P53053	380 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	ZRG17	P53735	605 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	DID2	P69771	204 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	YAT1	P80235	687 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	ATG21	Q02887	496 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	NHP10	Q03435	203 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	EMI1	Q04406	187 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	RCO1	Q04779	684 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	ECM22	Q05958	814 aa	Predicted RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
TRF5	YNL299W	LCB4	Q12246	624 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	RPN6	Q12377	434 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	ATG31	Q12421	196 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	AHC1	Q12433	566 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	HXK2	P04807	486 aa	Known RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	DST1	P07273	309 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	MAS1	P10507	462 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	URK1	P27515	501 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	RNP1	P32385	249 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	LST4	P34239	828 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	TSA1	P34760	196 aa	Known RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	GLG1	P36143	616 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	EFM1	P38732	585 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	YIR016W	P40572	265 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	ALB1	P47019	175 aa	Predicted RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	NAS6	P50086	228 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	COG1	P53079	417 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	YGR168C	P53293	376 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	IMP4	P53941	290 aa	Known RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	NUP100	Q02629	959 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	HER2	Q03557	464 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	EFR3	Q03653	782 aa	Known RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	YDR124W	Q04608	324 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	VTA1	Q06263	330 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	YDL073W	Q07454	984 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	THP1	Q08231	455 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	YOL131W	Q08270	108 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	ATP16	Q12165	160 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	AHA1	Q12449	350 aa	Known RBP	4.05	□□□□□ -1.76
TRF5	YNL299W	AFI1	Q99222	893 aa		4.05	□□□□□ -1.76
TRF5	YNL299W	RAS2	P01120	322 aa	Known RBP	4.04	□□□□□ -1.76
TRF5	YNL299W	ALG7	P07286	448 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	OLE1	P21147	510 aa	Known RBP	4.04	□□□□□ -1.76
TRF5	YNL299W	YIH1	P25637	258 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	MNN2	P38069	597 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	LEU5	P38702	357 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
TRF5	YNL299W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
TRF5	YNL299W	EDC3	P39998	551 aa	Known RBP	4.04	□□□□□ -1.76
TRF5	YNL299W	YER034W	P40022	185 aa	Known RBP	4.04	□□□□□ -1.76
TRF5	YNL299W	MPM1	P40364	252 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	AYR1	P40471	297 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	BUD13	P46947	266 aa	Predicted RBP	4.04	□□□□□ -1.76
TRF5	YNL299W	SNG1	P46950	547 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	GCD14	P46959	383 aa	Predicted RBP	4.04	□□□□□ -1.76
TRF5	YNL299W	MNN5	P46982	586 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	GTO1	P48239	356 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	MUP1	P50276	574 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	SPT20	P50875	604 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	TPN1	P53099	579 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	PRM8	P53174	237 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	NQM1	P53228	333 aa	Predicted RBP	4.04	□□□□□ -1.76
TRF5	YNL299W	CSL4	P53859	292 aa	Predicted RBP	4.04	□□□□□ -1.76
TRF5	YNL299W	CDC14	Q00684	551 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	PET117	Q02771	107 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	SPC19	Q03954	165 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	SPG3	Q04398	127 aa	Predicted RBP	4.04	□□□□□ -1.76
TRF5	YNL299W	RRP9	Q06506	573 aa	Known RBP	4.04	□□□□□ -1.76
TRF5	YNL299W	MFG1	Q07684	458 aa		4.04	□□□□□ -1.76
TRF5	YNL299W	COS7	Q07788	383 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms