RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W SPT10P35208 640 aa2.73□□□□□ -1.97
SRP1YNL189W MAM33P40513 266 aa2.73□□□□□ -1.97
SRP1YNL189W SHE10P53075 577 aa2.73□□□□□ -1.97
SRP1YNL189W AIM33Q04516 312 aa2.73□□□□□ -1.97
SRP1YNL189W YHC1Q05900 231 aaKnown RBP2.73□□□□□ -1.97
SRP1YNL189W DBP9Q06218 594 aaKnown RBP2.73□□□□□ -1.97
SRP1YNL189W LOT6Q07923 191 aa2.73□□□□□ -1.97
SRP1YNL189W PEX27Q08580 376 aa2.73□□□□□ -1.97
SRP1YNL189W JID1Q12350 301 aa2.73□□□□□ -1.97
SRP1YNL189W YOR338WQ99326 363 aa2.73□□□□□ -1.97
SRP1YNL189W STE3P06783 470 aa2.72□□□□□ -1.97
SRP1YNL189W RPS16AP0CX51 143 aaKnown RBP2.72□□□□□ -1.97
SRP1YNL189W RPS16BP0CX52 143 aaKnown RBP2.72□□□□□ -1.97
SRP1YNL189W RPB5P20434 215 aa2.72□□□□□ -1.97
SRP1YNL189W OPI1P21957 404 aa2.72□□□□□ -1.97
SRP1YNL189W PHO84P25297 587 aaKnown RBP2.72□□□□□ -1.97
SRP1YNL189W CHA1P25379 360 aaKnown RBP2.72□□□□□ -1.97
SRP1YNL189W SEC27P41811 889 aaKnown RBP2.72□□□□□ -1.97
SRP1YNL189W YGR016WP53209 190 aa2.72□□□□□ -1.97
SRP1YNL189W SHY1P53266 389 aa2.72□□□□□ -1.97
SRP1YNL189W YDL199CQ12407 687 aa2.72□□□□□ -1.97
SRP1YNL189W NAG1Q8TGN9 163 aa2.72□□□□□ -1.97
SRP1YNL189W RAD5P32849 1169 aaPredicted RBP2.71□□□□□ -1.97
SRP1YNL189W SPO23P33757 523 aa2.71□□□□□ -1.97
SRP1YNL189W UTH1P36135 365 aa2.71□□□□□ -1.97
SRP1YNL189W KEG1P43614 200 aa2.71□□□□□ -1.97
SRP1YNL189W MPS2P53159 387 aa2.71□□□□□ -1.97
SRP1YNL189W RET3P53600 189 aa2.71□□□□□ -1.97
SRP1YNL189W YET2Q04210 160 aa2.71□□□□□ -1.97
SRP1YNL189W PRM6Q04705 352 aa2.71□□□□□ -1.97
SRP1YNL189W LIP2Q06005 328 aa2.71□□□□□ -1.97
SRP1YNL189W MCT1Q12283 360 aa2.71□□□□□ -1.97
SRP1YNL189W AIM45Q12480 344 aaKnown RBP2.71□□□□□ -1.97
SRP1YNL189W SAG1P20840 650 aa2.71□□□□□ -1.98
SRP1YNL189W AAT2P23542 418 aaKnown RBP2.71□□□□□ -1.98
SRP1YNL189W FUN26P31381 517 aa2.71□□□□□ -1.98
SRP1YNL189W MSK1P32048 576 aa2.71□□□□□ -1.98
SRP1YNL189W YNL208WP40159 199 aaKnown RBP2.71□□□□□ -1.98
SRP1YNL189W CIN2P46670 268 aa2.71□□□□□ -1.98
SRP1YNL189W PGU1P47180 361 aa2.71□□□□□ -1.98
SRP1YNL189W TSA2Q04120 196 aa2.71□□□□□ -1.98
SRP1YNL189W YMR027WQ04371 470 aa2.71□□□□□ -1.98
SRP1YNL189W PSY3Q12318 242 aa2.71□□□□□ -1.98
SRP1YNL189W DET1Q99288 334 aaKnown RBP2.71□□□□□ -1.98
SRP1YNL189W PFS1P38872 237 aa2.7□□□□□ -1.98
SRP1YNL189W TIM17P39515 158 aa2.7□□□□□ -1.98
SRP1YNL189W LYS12P40495 371 aaKnown RBP2.7□□□□□ -1.98
SRP1YNL189W SNL1P40548 159 aa2.7□□□□□ -1.98
SRP1YNL189W CUE3P53137 624 aaKnown RBP2.7□□□□□ -1.98
SRP1YNL189W AQR1P53943 586 aa2.7□□□□□ -1.98
SRP1YNL189W YLH47Q06493 454 aa2.7□□□□□ -1.98
SRP1YNL189W PCL9Q12477 304 aa2.7□□□□□ -1.98
SRP1YNL189W SPT7P35177 1332 aa2.7□□□□□ -1.98
SRP1YNL189W RDS1P25611 832 aa2.69□□□□□ -1.98
SRP1YNL189W NAS2P40555 220 aa2.69□□□□□ -1.98
SRP1YNL189W EFM3P47163 339 aa2.69□□□□□ -1.98
SRP1YNL189W CLD1P53264 445 aa2.69□□□□□ -1.98
SRP1YNL189W HAL1Q01766 294 aa2.69□□□□□ -1.98
SRP1YNL189W YDL114WQ07530 308 aa2.69□□□□□ -1.98
SRP1YNL189W CMS1Q07897 291 aaKnown RBP2.69□□□□□ -1.98
SRP1YNL189W PGC1Q08959 321 aa2.69□□□□□ -1.98
SRP1YNL189W FSH3Q99369 266 aa2.69□□□□□ -1.98
SRP1YNL189W ZUO1P32527 433 aaKnown RBP2.68□□□□□ -1.98
SRP1YNL189W GDT1P38301 280 aaPredicted RBP2.68□□□□□ -1.98
SRP1YNL189W ATG7P38862 630 aa2.68□□□□□ -1.98
SRP1YNL189W CAJ1P39101 391 aa2.68□□□□□ -1.98
SRP1YNL189W REX2P54964 269 aaKnown RBP2.68□□□□□ -1.98
SRP1YNL189W SKI8Q02793 397 aaPredicted RBP2.68□□□□□ -1.98
SRP1YNL189W SMP3Q04174 516 aa2.68□□□□□ -1.98
SRP1YNL189W SHS1Q07657 551 aa2.68□□□□□ -1.98
SRP1YNL189W MEX67Q99257 599 aaKnown RBP2.68□□□□□ -1.98
SRP1YNL189W RPS14AP06367 137 aaKnown RBP2.68□□□□□ -1.98
SRP1YNL189W CKI1P20485 582 aa2.68□□□□□ -1.98
SRP1YNL189W FAR1P21268 830 aa2.68□□□□□ -1.98
SRP1YNL189W GRR1P24814 1151 aa2.68□□□□□ -1.98
SRP1YNL189W SMI1P32566 505 aa2.68□□□□□ -1.98
SRP1YNL189W VAM7P32912 316 aa2.68□□□□□ -1.98
SRP1YNL189W RPS14BP39516 138 aaKnown RBP2.68□□□□□ -1.98
SRP1YNL189W LCP5P40079 357 aaPredicted RBP2.68□□□□□ -1.98
SRP1YNL189W YER186CP40101 306 aa2.68□□□□□ -1.98
SRP1YNL189W RPA34P47006 233 aaPredicted RBP2.68□□□□□ -1.98
SRP1YNL189W ALF1P53904 254 aa2.68□□□□□ -1.98
SRP1YNL189W HTZ1Q12692 134 aaKnown RBP2.68□□□□□ -1.98
SRP1YNL189W SOD1P00445 154 aaKnown RBP2.67□□□□□ -1.98
SRP1YNL189W RPS18AP0CX55 146 aaKnown RBP2.67□□□□□ -1.98
SRP1YNL189W RPS18BP0CX56 146 aaPredicted RBP2.67□□□□□ -1.98
SRP1YNL189W TPM1P17536 199 aaKnown RBP2.67□□□□□ -1.98
SRP1YNL189W CDC50P25656 391 aa2.67□□□□□ -1.98
SRP1YNL189W PRR1P28708 518 aa2.67□□□□□ -1.98
SRP1YNL189W YBL028CP38202 106 aa2.67□□□□□ -1.98
SRP1YNL189W OM14P38325 134 aa2.67□□□□□ -1.98
SRP1YNL189W YOR376WQ08900 122 aa2.67□□□□□ -1.98
SRP1YNL189W PRB1P09232 635 aa2.66□□□□□ -1.98
SRP1YNL189W MAS1P10507 462 aa2.66□□□□□ -1.98
SRP1YNL189W MAS2P11914 482 aa2.66□□□□□ -1.98
SRP1YNL189W HSP26P15992 214 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
SRP1YNL189W THR4P16120 514 aaKnown RBP2.66□□□□□ -1.98
SRP1YNL189W MRPL8P22353 238 aa2.66□□□□□ -1.98
SRP1YNL189W SSE1P32589 693 aaKnown RBP2.66□□□□□ -1.98
SRP1YNL189W IES6P32617 166 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms